Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,487,450 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,487,4500GC99.3% 692.9 / ‑3.9 297intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/0);  major base C (149/144);  minor base . (2/0);  total (152/145)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,487,4510CG98.7% 689.9 / NA 297intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (3/1);  new base G (149/144);  total (152/145)
Fisher's exact test for biased strand distribution p-value = 6.23e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,487,4520TA99.7% 705.9 / NA 297intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base A (150/145);  total (152/145)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 297 total aligned reads displayed.

TCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGGCTTAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CGC‑TAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGCCGTTATAACGGTCTGTCAGCCAGCTTGCCTGACCAAATAAATAGTCATAATCAGTTAAATTAAAACGGCTACGCCC  >  CP042583/1487174‑1487731
                                                                                                                                                                                                                                                                                     ||||                                                                                                                                                                                                                                                                                        
      gcgcTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGGCCCAAAGA‑CCG‑AAACA‑CCCTGCGGAAAt                                                                                                                                                                                                                                                                         >  2:1122554/1‑289 (MQ=255)
                gttgCTACGTGTGGCAGAAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTgt                                                                                                                                                                                                                                                               <  2:2023358/289‑1 (MQ=255)
                    cTACGTTGGGCAGCAATGCTTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATACGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGCACATTTAGCGTTgtcag                                                                                                                                                                                                                                                            >  1:2145060/1‑288 (MQ=255)
                      aCGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGGCGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAg                                                                                                                                                                                                                                                                     <  1:1758508/277‑1 (MQ=255)
                      aCGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGt                                                                                                                                                                                                                                                                  >  1:1383655/1‑280 (MQ=255)
                       gggtataagagccagATGTGGGGCGGAGCAGTGACAAACGAAGCCACCCAGACCGCATAACACGGGCCGGCAGATAATTTTACATGCTGTCGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTTGAGGTTCAGAGTTTCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTTATTAATAGCGACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCaa                                                                                                                                                                                                                                                        <  2:1503937/275‑1 (MQ=255)
                       cGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCaa                                                                                                                                                                                                                                                        <  1:1739193/289‑1 (MQ=255)
                        gTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTgtcagtca                                                                                                                                                                                                                                                         >  1:457171/1‑287 (MQ=255)
                            ggCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACCCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑C‑C‑GAACACCCCTTCGTTAATTTAGCGTTtccagttacttgc                                                                                                                                                                                                                                                    >  2:1112009/1‑281 (MQ=255)
                            ggCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTGCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGTCGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGATTTGTTTCTTCGGCGCCAAAGA‑CCG‑AAACA‑CACTGCGCTAATTTAGCGTTTGCAGTCAACTGc                                                                                                                                                                                                                                                    >  2:584345/1‑288 (MQ=255)
                              cagcaATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCa                                                                                                                                                                                                                                                  <  1:1815482/288‑1 (MQ=255)
                                 caATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCATTGTGTCTTCCGCGACAAAGA‑CCG‑AAACA‑CCCTACGTCAATTTAGCGTTTTTAGCCTACTGCCATTCa                                                                                                                                                                                                                                              >  2:1814987/1‑289 (MQ=255)
                                           gggCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCgg                                                                                                                                                                                                                                    >  2:47216/1‑289 (MQ=255)
                                           gggCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGGGTTTTCCGCGTCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCATGCAACTGCCATGCATAAACCCCgg                                                                                                                                                                                                                                    >  2:55697/1‑289 (MQ=255)
                                            ggCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCaa                                                                                                                                                                                                                                                        <  2:1271125/268‑1 (MQ=255)
                                            ggCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCgg                                                                                                                                                                                                                                    <  1:1604192/288‑1 (MQ=255)
                                            ggCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCgg                                                                                                                                                                                                                                    <  1:1047704/288‑1 (MQ=255)
                                                gAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGGTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACGGCCATGCATAAGCCCCGGAGGCa                                                                                                                                                                                                                               >  2:1562668/1‑289 (MQ=255)
                                                 aGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCCGCGTAAATTTAGCGTTGGCAGTCCACTGCCATGCATAAGCCCCGGac                                                                                                                                                                                                                                  >  2:944313/1‑284 (MQ=255)
                                                 aGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCACAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTTCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCAAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCa                                                                                                                                                                                                                                              >  1:1503937/1‑273 (MQ=255)
                                                 aGCAATGACAAACGAAGACAGCCAGACCGAATAACACTGTCCTGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCgg                                                                                                                                                                                                                                    <  2:1746312/283‑1 (MQ=255)
                                                      tGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGccc                                                                                                                                                                                                                         >  1:1212769/1‑289 (MQ=255)
                                                        aCAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCa                                                                                                                                                                                                                        >  1:1029402/1‑288 (MQ=255)
                                                           aaCGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCTGAGGCATAGCCCAGCg                                                                                                                                                                                                                     >  1:1698014/1‑289 (MQ=255)
                                                                aGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTggg                                                                                                                                                                                                               >  1:1298041/1‑289 (MQ=255)
                                                                       cAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGt                                                                                                                                                                                                              <  1:1087369/283‑1 (MQ=255)
                                                                               aTAACACGGTCAGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGt                                                                                                                                                                                                <  1:699659/289‑1 (MQ=255)
                                                                                   cagggTCCGGAAGATAATTTTACATGCGGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGt                                                                                                                                                                                            <  2:1397451/286‑1 (MQ=255)
                                                                                      ggTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGtata                                                                                                                                                                                         >  1:2414234/1‑289 (MQ=255)
                                                                                        tCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATa                                                                                                                                                                                                                                            >  1:1921708/1‑236 (MQ=255)
                                                                                        tCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCa                                                                                                                                                                                                    >  2:81122/1‑276 (MQ=255)
                                                                                        tCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGCCGTGGTTTCACTGGCATTGCCGGTATAtt                                                                                                                                                                                       >  2:1934073/1‑289 (MQ=255)
                                                                                              agtacaTTTTACATGCTGTAGCCCAGCGGTAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGGCTCTGGAGGTTCAGAGTTCCATGTTACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCg                                                                                                                                                                                  <  2:2242727/283‑1 (MQ=255)
                                                                                                  aaTTTTTCATGCGGTAGCCCAGCGGTAAGGTGGGCCGACGGTCGGTAGGTTCCGGTGCAGGCTCTTGAGGTTCAGAGTTCCAGGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACg                                                                                                                                                                             <  2:647399/289‑1 (MQ=255)
                                                                                                  aaTTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACg                                                                                                                                                                             <  1:369438/289‑1 (MQ=255)
                                                                                                  aaTTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACg                                                                                                                                                                             <  2:2216208/289‑1 (MQ=255)
                                                                                                            gCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTgg                                                                                                                                                                    >  1:2493847/1‑288 (MQ=255)
                                                                                                              tGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGAAACATTTAATGCGCTATCGGAGTTAAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACC‑CCCTGCGTAAATCTAGCGTTGTCAGTCAACTGCCATGCTTAAGCCCCGGAGGCATAGCCCAGCGGCTGGGGTTCACTGGCATTGTCGGTCTATTTGTTGTAACGCACACCTGGAcg                                                                                                                                                                 >  2:1918801/1‑288 (MQ=255)
                                                                                                                      agcgatAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCaa                                                                                                                                                         >  1:1642686/6‑289 (MQ=255)
                                                                                                                       gcgatAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCa                                                                                                                                                                                                          <  2:2689623/235‑1 (MQ=255)
                                                                                                                        cgatAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATa                                                                                                                                                                                                                                            <  1:1453702/201‑1 (MQ=255)
                                                                                                                        cgatAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGttt                                                                                                                                                                                                            <  1:2350489/233‑1 (MQ=255)
                                                                                                                        cgatAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCCTTTCCGGTATATTGGTCGTAACGCACCCCTGGACCGAATTCaaa                                                                                                                                                        >  2:2053944/4‑288 (MQ=255)
                                                                                                                        cgatAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCaaa                                                                                                                                                        >  1:606896/4‑288 (MQ=255)
                                                                                                                        cgatAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCaaa                                                                                                                                                        >  1:780771/4‑288 (MQ=255)
                                                                                                                        cgatAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGCCGGGGTTCCACTGGCATTGTCGGTATATTTGTCCTAACGCACACCTGGACCGACTACaaa                                                                                                                                                        >  1:380910/4‑288 (MQ=255)
                                                                                                                          atAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCg                                                                                                                                                     >  2:380032/2‑289 (MQ=255)
                                                                                                                           tAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCgg                                                                                                                                                    <  1:1689580/289‑1 (MQ=255)
                                                                                                                                 tggtcGACGGTCGGTGTGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCAAGTGACGTTGTAAGCCACCTTCAGGCCAAAATGTTCATTATTAGAAACATTTAAAGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACt                                                                                                                                               <  2:260026/284‑1 (MQ=255)
                                                                                                                                 tGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACt                                                                                                                                               <  1:2082331/288‑1 (MQ=255)
                                                                                                                                  gTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCaa                                                                                                                                                                                                                                                        >  1:1238195/1‑182 (MQ=255)
                                                                                                                                   tCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATAtt                                                                                                                                                                                       <  1:43956/246‑1 (MQ=255)
                                                                                                                                         ggtcggtATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCa                                                                                                                                                                                                    <  2:2122325/227‑1 (MQ=255)
                                                                                                                                                  gTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCaa                                                                                                                             >  1:1165276/1‑289 (MQ=255)
                                                                                                                                                    tCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCa                                                                                                                                                                                                                                              >  2:2642555/1‑174 (MQ=255)
                                                                                                                                                    tCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCa                                                                                                                                                                                                                                              <  1:2642555/174‑1 (MQ=255)
                                                                                                                                                    tCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGATCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGCATTCACAGCGGAAACCTTTGACGGGTCCATCCaaaa                                                                                                                           >  2:1151627/1‑289 (MQ=255)
                                                                                                                                                     ccGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCaaaaa                                                                                                                          >  2:1242433/1‑289 (MQ=255)
                                                                                                                                                     ccGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCaaaa                                                                                                                           >  1:1005348/1‑288 (MQ=255)
                                                                                                                                                        gTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTCAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTg                                                                                                                       >  2:453645/1‑289 (MQ=255)
                                                                                                                                                         tGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGt                                                                                                                                                                                            <  1:1139616/219‑1 (MQ=255)
                                                                                                                                                         tGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCgg                                                                                                                                                    <  1:1730116/259‑1 (MQ=255)
                                                                                                                                                         tGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCgg                                                                                                                                                    >  2:1730116/1‑259 (MQ=255)
                                                                                                                                                         tGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGa                                                                                                                                                   >  1:941715/1‑260 (MQ=255)
                                                                                                                                                             gACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACg                                                                                                                                                                             >  2:708673/1‑230 (MQ=255)
                                                                                                                                                                 ctGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATa                                                                                                              >  1:2692979/1‑289 (MQ=255)
                                                                                                                                                                        ttCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCcgc                                                                                                        <  2:1453992/288‑1 (MQ=255)
                                                                                                                                                                        ttCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCcgc                                                                                                        <  2:1681708/288‑1 (MQ=255)
                                                                                                                                                                          cAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑ccc                                                                                                                                                                                                                                                                                  <  2:439415/116‑1 (MQ=255)
                                                                                                                                                                          cAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTgtca                                                                                                                                                                                                                                                             <  2:1869627/137‑1 (MQ=255)
                                                                                                                                                                          cAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCgg                                                                                                      >  2:2507988/1‑288 (MQ=255)
                                                                                                                                                                            gagTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAGGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCa                                                                                                   >  1:1223112/1‑289 (MQ=255)
                                                                                                                                                                                  cATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCa                                                                                                                                                                                                                               >  1:2324347/1‑159 (MQ=255)
                                                                                                                                                                                  cATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGc                                                                                                                                    >  1:111952/1‑250 (MQ=255)
                                                                                                                                                                                    tgtgACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCa                                                                                                                                                                                                    <  1:308096/184‑1 (MQ=255)
                                                                                                                                                                                    tgtgACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCa                                                                                                                                                                                                    >  2:308096/1‑184 (MQ=255)
                                                                                                                                                                                    tgtgACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATc                                                                                            >  1:1889354/1‑288 (MQ=255)
                                                                                                                                                                                    tgtgACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACGGCCGACCATAACCCGCGGTCAacaaagc                                                                                            >  2:1312617/1‑284 (MQ=255)
                                                                                                                                                                                         cGTTGTACGCGGCCTTCCGTCCAAAATTTTCATTAATGGCAACATTTAATGCGCTTTCGGAGTTCAGGGTTGTGTCTTCCGCGCCACAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCCTAGCCCAGCGGCTGGGTTTCACTGGCATTGTGGGTATATTTGTCGTAACGCACACCTGGACCGGATGCAAAGCGGAAACTGGGGACCGGGCCATTCAAGAACAGACGACCATAACCCGCGGTCAACACATCGCGct                                                                                       <  2:1661583/288‑1 (MQ=255)
                                                                                                                                                                                              tAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAGGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGAt                                                                                 <  2:1223112/289‑1 (MQ=255)
                                                                                                                                                                                              tAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGa                                                                                                                                                   >  1:2234990/1‑223 (MQ=255)
                                                                                                                                                                                              tAAGCCACCTGCAGTCCAACATGTTCATTAATGGCAACATTTAATGCGCTTTCGGAGTTCAGCGTGTTGTCGTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGTAGGCATAGACCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGAt                                                                                 <  2:2414234/289‑1 (MQ=255)
                                                                                                                                                                                                  ccACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAAc                                                                                                            <  1:753069/258‑1 (MQ=255)
                                                                                                                                                                                                  ccACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAAc                                                                                                            >  2:753069/1‑258 (MQ=255)
                                                                                                                                                                                                   cACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGc                                                                              <  1:497273/287‑1 (MQ=255)
                                                                                                                                                                                                   cACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGCCGGTATATTTGTTGTAACGCACACCTGGCCCGAATTCAAAGCGGTAACTTTTGTCCGGGCCATTCAAAAACTGACGACCATACCCCGCCGACAACACAACGCTCTCTCGCTCGCCg                                                                            >  2:1003704/1‑289 (MQ=255)
                                                                                                                                                                                                     ccTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCa                                                                                                                                                                                                                                                  >  2:1632475/1‑121 (MQ=255)
                                                                                                                                                                                                     ccTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGc                                                                              <  2:1696349/285‑1 (MQ=255)
                                                                                                                                                                                                     ccTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCAGTCAAAAACTGACGACCATAACCCGCGGTCAACACATCTCGCTCCCGATAGcctat                                                                          >  2:1033857/1‑286 (MQ=255)
                                                                                                                                                                                                             ccAAAACGGTCATTAATAGCAGCATTTAATGCGCTTTCGGAGTGCGGAGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGGGTTGTCAGTCAACTGCAATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGCCGTTATAACg                                                                    <  2:2560016/287‑1 (MQ=255)
                                                                                                                                                                                                                aaaTGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTTAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACg                                                                                                                                                                             <  1:1995620/179‑1 (MQ=255)
                                                                                                                                                                                                                aaaTGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGCCGTTATAACgg                                                                   >  1:277411/1‑285 (MQ=255)
                                                                                                                                                                                                                             tAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAAccc                                                                                                          <  2:2347387/233‑1 (MQ=255)
                                                                                                                                                                                                                               gCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGt                                                                                                                                                                                            <  2:902093/149‑1 (MQ=255)
                                                                                                                                                                                                                                          tGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGCCGTTATAACGGTCTGTCAGCCAGCTTGCCTGACCaaataaa                                     <  1:813301/289‑1 (MQ=255)
                                                                                                                                                                                                                                              cTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGCCGTTATAACGGTCTGTCAGCCAGCTTGCCTGACCAAATAAATAg                                  >  1:2573902/1‑288 (MQ=255)
                                                                                                                                                                                                                                                     aggtCAGCGTTGTGTCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGCCGTTATAACGGTCTGTCAGCCAGCTTGCCTGACCAAATAAATAGTCATAAt                           <  1:1428896/285‑1 (MQ=255)
                                                                                                                                                                                                                                                        tcagttgtgtgTCTCCCG‑GCCAAAGG‑CCCGAAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAGGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGCCGTTATAACGGTCTGTCAGCCAGCTTGCCTGACCAAATAAATAGTCATAATCAGt                       <  2:1183348/282‑1 (MQ=255)
                                                                                                                                                                                                                                                                  gtCTTCCGCGCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGCCGTTATAACGGTCTGTCAGCCAGCTTGCCTGACCAAATAAATAGTCATAATCAGttaaattaaa              <  1:643688/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                        cgcgCCAAAGA‑CCG‑AAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCCCTCGATAGCCGTTATAACGGTCTGTCAGCCAGCTTGCCTGACCAAATAAATAGTCATAATCAGTTAAATTAAAACGGCt        >  1:859131/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                     ||||                                                                                                                                                                                                                                                                                        
TCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGGCTTAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGA‑CGC‑TAACA‑CCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGCCGTTATAACGGTCTGTCAGCCAGCTTGCCTGACCAAATAAATAGTCATAATCAGTTAAATTAAAACGGCTACGCCC  >  CP042583/1487174‑1487731

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A