Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,527,523 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,527,5230GC98.4% 563.9 / NA 245intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/1);  major base C (123/116);  minor base A (3/1);  total (127/118)
Fisher's exact test for biased strand distribution p-value = 6.23e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,527,5240CG98.8% 551.5 / NA 245intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/1);  new base G (124/116);  total (127/118)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,527,5250TA98.8% 559.3 / ‑5.2 245intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/1);  major base A (125/113);  minor base G (1/2);  total (127/118)
Fisher's exact test for biased strand distribution p-value = 6.07e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 245 total aligned reads displayed.

CCTGATAGCGACACTGCTTTTCGCTGATTTGCGTCAGCACGCTTTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGGCTATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCGCTAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGCAATGTCCAGTTCGATAACACACTTGCGGAACACCGCATCCGGGCAGAATTGCATCAGATACTGACGGGCAATCA  >  CP042583/1527249‑1527803
                                                                                                                                                                                                                                                                                  |||                                                                                                                                                                                                                                                                                        
ccTGATAGCGACACTGCTTTTCGCTGATTTGCGTCAGCACCGATTCCCAGTGCGCGGGCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGc                                                                                                                                                                                                                                                                              <  2:1695395/289‑1 (MQ=255)
  tGATAGCGACACTGCTTTTCGCTGATTTGCGTCAGCACCGATTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCACGGTCATCGCCGAAAGCAGTGTTGCAt                                                                                                                                                                                                                                                                            >  1:1187081/1‑289 (MQ=255)
  tGATAGCGACACTGCGTTTCGCTGATTTGCGTCAGCACCGATTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGTCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGCGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCa                                                                                                                                                                                                                                                                             >  2:436979/1‑288 (MQ=255)
                cTTTTCGCTGATTTGCGTCAGCACCGATTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGgcgc                                                                                                                                                                                                                                                             >  1:1581491/1‑289 (MQ=255)
                 ttttCGCTGATTTGCGTCAGCACCGATTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGcgcg                                                                                                                                                                                                                                                            <  1:1863518/289‑1 (MQ=255)
                     cGCTGATTTTCGTCAGCACCGATTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTCTCTCTGACCCCAGACCATCGTTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCCCGCTCCCGGTCATCTCCGAAAGCAGTGTTTCTG‑CGGTAACGTGGCgcggcg                                                                                                                                                                                                                                                         >  2:252782/1‑288 (MQ=255)
                            ttGGGTCAGCACCGATTCCCGTGGGGCGGTCATGTCCGGGCGCGTCGCCATCTCCGGCAGGGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGtt                                                                                                                                                                                                                                                 <  2:1862371/289‑1 (MQ=255)
                                gTCAGCACCGATTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGc                                                                                                                                                                                                                                              <  1:1005589/288‑1 (MQ=255)
                                gTCAGCACCGATTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGc                                                                                                                                                                                                                                              <  1:1994591/288‑1 (MQ=255)
                                    gcaccgattCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGc                                                                                                                                                                                                                                           >  1:832156/8‑287 (MQ=255)
                                     gaccgattCCCCGTGGTCGGTCAGTTCCGGTCGGGTGGCCATTTCCGGCAGCGAATGGAATGGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGctc                                                                                                                                                                                                                                         <  2:925094/282‑1 (MQ=255)
                                         gattCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTAcc                                                                                                                                                                                                                                     >  1:883524/3‑288 (MQ=255)
                                          attCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCa                                                                                                                                                                                                                                    >  2:898130/2‑288 (MQ=255)
                                           ttCCCCGTGCTCGGTCCTGTCCGGTCGCTGCGCCAGTTCCGGCAGCGAATGGAATAGGGCTGTTGCGGCGTCGGTGGAGTGGATATGGCGCCCTTGTGTGGTCAGGAAACCGCGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCGCTACCACt                                                                                                                                                                                                                                  <  2:1133367/289‑1 (MQ=255)
                                                  tGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCTCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCGGGGTTTGCCGCTCTCCCACTTCACCtt                                                                                                                                                                                                                           >  2:811067/1‑289 (MQ=255)
                                                    cgcgGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAt                                                                                                                                                                                                                                                                            <  2:725194/239‑1 (MQ=255)
                                                    cgcgGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAt                                                                                                                                                                                                                                                                            >  1:725194/1‑239 (MQ=255)
                                                    cgcgGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCtttt                                                                                                                                                                                                                         >  1:35726/1‑289 (MQ=255)
                                                      cgGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCGCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCACGATCCCGGTCATCGCCGAAAGCAGTGTCGCAT‑CGGTAAAATGGCGCGGCGGCGGGGTTTGCCGCCCTACCACATCACCtttt                                                                                                                                                                                                                         >  1:668416/1‑287 (MQ=255)
                                                             gTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGc                                                                                                                                                                                                                <  1:800161/289‑1 (MQ=255)
                                                                   tcgcgtcgcCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAGACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGAGCGCGATCCCGGTCCTCGCCGAAAGCAGATTGTCAT‑CGGTAAAATGGAGCGGTGGTCGGGTTTGCGGTCCTACCACTTCCCCTTTTTcacacacgcactc                                                                                                                                                                                                           >  2:964825/1‑281 (MQ=255)
                                                                   tcgcgtcgcCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCa                                                                                                                                                                                                          >  1:1038753/1‑289 (MQ=255)
                                                                   tcgcgtcgcCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCC‑GACCCTCCGTCCCACCGCGGATCTTTTTTAAATCTTTATCCTGCCCAAAGCGCACGATCCCGGTCACGCCCCAAAGCACTGTTTCATGCGTAAAAATGGC‑CGGGGGGTTGGTTTTTCGCTCCGCCACTTCCCCCTTTTcaccccaccaccac                                                                                                                                                                                                          >  2:1478507/1‑277 (MQ=255)
                                                                        tcgcCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGc                                                                                                                                                                                                      >  1:623520/1‑288 (MQ=255)
                                                                            cATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCttt                                                                                                                                                                                                  <  1:1958967/288‑1 (MQ=255)
                                                                             aTCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCg                                                                                                                                                                                                <  2:5107/289‑1 (MQ=255)
                                                                             aTCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCg                                                                                                                                                                                                <  2:941049/289‑1 (MQ=255)
                                                                             aTCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCg                                                                                                                                                                                                <  1:1352178/289‑1 (MQ=255)
                                                                                tcCGGCAGTGAATGGAATAGCGAGTTTCCGTCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCg                                                                                                                                                                                                <  2:1522397/286‑1 (MQ=255)
                                                                                tcCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGcca                                                                                                                                                                                             <  2:67524/289‑1 (MQ=255)
                                                                                   ggcagcgaaTGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGccacca                                                                                                                                                                                          <  1:464594/281‑1 (MQ=255)
                                                                                        cgaaTGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACCgg                                                                                                                                                                                      >  1:1629142/4‑288 (MQ=255)
                                                                                          aaTGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCg                                                                                                                                                                                                       <  2:875558/268‑1 (MQ=255)
                                                                                                    cgcTTTTCCAGCGACGGTGGACTGCAGATATCGCACTGTTTTGGTCAGGTAACCACGCTTGAACAACAGTGCAAGAATCGCGGCACTCGGTGCCGCTGTACCAGTACCATCGGTCGCACGGATGAGCTTTGTCAGGTCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCATAAAGCAGTGTTGCAT‑CGGTATAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTGTTCACACAGCAACTCATCGCCTGTCGCCACCACAGGCAGTGGCGTGCcg                                                                                                                                                                         <  2:475991/289‑1 (MQ=255)
                                                                                                      cTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCcgtc                                                                                                                                                                       >  1:596922/1‑289 (MQ=255)
                                                                                                         ttCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAACGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCCTCGCCTTTCGCCACCACAGGCCGTGGCGTCCcggccct                                                                                                                                                                    >  2:848338/1‑284 (MQ=255)
                                                                                                         ttCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACCCAGCAACTCATCGCCTTTCGCCCCCACAGCCCCTGGCGTTCCGTCCtt                                                                                                                                                                    >  2:1975563/1‑289 (MQ=255)
                                                                                                         ttCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACCCATCGCCTTTCGCCACCACCGGCAGTGGCGTGCCGGCGtt                                                                                                                                                                    >  2:1653207/1‑289 (MQ=255)
                                                                                                                          tggaTATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCt                                                                                                                                                                                                    >  1:1432458/1‑240 (MQ=255)
                                                                                                                          tggaTATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCt                                                                                                                                                                                                    <  2:1432458/240‑1 (MQ=255)
                                                                                                                             atatAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTtg                                                                                                                                                 <  1:964825/288‑1 (MQ=255)
                                                                                                                             atatAGCGCCCTTTTGTTGTCAGGAAACCCCGCTTGACCAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTtg                                                                                                                                                 <  2:578632/288‑1 (MQ=255)
                                                                                                                                 aGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGccacc                                                                                                                                                                                           <  1:230565/242‑1 (MQ=255)
                                                                                                                                 aGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTtgctg                                                                                                                                              >  1:1980446/1‑287 (MQ=255)
                                                                                                                                  gcgcCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCg                                                                                                                                                                                                >  2:645854/1‑236 (MQ=255)
                                                                                                                                   cgcCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTCCTTCATCGCCCTCTTTGCCGCCTa                                                                                                                                          >  2:1012324/1‑289 (MQ=255)
                                                                                                                                      ccTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCtt                                                                                                                                                                                                                           <  2:607048/205‑1 (MQ=255)
                                                                                                                                      ccTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCtt                                                                                                                                                   <  2:1872260/277‑1 (MQ=255)
                                                                                                                                      ccTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCtt                                                                                                                                                   >  1:1872260/1‑277 (MQ=255)
                                                                                                                                       cTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTc                                                                                                                                                                                                                                >  1:857543/1‑199 (MQ=255)
                                                                                                                                        ttttttGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTAATCGCCTTTCGCCCCCACAGTCAGTGGCGTGCCGCCGTTTTCATCATCGCGCTCTTTCCTTCCTCACAGc                                                                                                                                     >  2:130510/1‑289 (MQ=255)
                                                                                                                                                             cTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCa                                                                                                               >  2:385881/1‑289 (MQ=255)
                                                                                                                                                              ttGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCg                                                                                                                                                                                                <  2:1987170/208‑1 (MQ=255)
                                                                                                                                                              ttGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCg                                                                                                                                                                                                >  1:1987170/1‑208 (MQ=255)
                                                                                                                                                              ttGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCaa                                                                                                              >  1:614104/1‑289 (MQ=255)
                                                                                                                                                                 cacaacaGTTCAATAATCCCGGCCCGCGTTGCCTCTGTCCCCAGCCCATCGGTCGCACGGAGGATCTTTTTCAGCTCTTTATCCTCCACATAGGCCGCGATAACGGTCATCGCACCCACCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGACGCTCTACCACTTCACCTTTTTCACACAGCACCTCATCGCCTTTCGCCACCACAGGCAGTGGCCTGCCGTCGTTATCCTTGTCGCGCACCTTGCTCCCTAACAGCGT‑GCGCCAACCTGcatgcctaagga                                                                                                           >  2:984083/2‑278 (MQ=255)
                                                                                                                                                                        gTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCCCGCTCTTTGCTGCCTAACAGCGT‑TCGCCCGCCTGCTTCAGCAAGAAAAcgc                                                                                                      >  1:1672898/1‑287 (MQ=255)
                                                                                                                                                                        gTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTACACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCTCCCTTTGCTGCCTAACAGCCT‑GCGCCCGCCTGCTTCAGCCAGAAAAcgcg                                                                                                     >  2:1685281/1‑288 (MQ=255)
                                                                                                                                                                          tCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCtt                                                                                                  <  1:294719/289‑1 (MQ=255)
                                                                                                                                                                                   ccGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTtg                                                                                                                                                 <  1:1883476/234‑1 (MQ=255)
                                                                                                                                                                                      gCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCCAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACTCGCTTTAGCGAAAAAtt                                                                                      >  2:282354/1‑289 (MQ=255)
                                                                                                                                                                                           cgTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCCTCGCCTTTCTCCACCCCAGGCAGCACCGTTCCGTCATTTTCTTCAACGACCTCTTTGCTGCCTAACAGCGTCACGCCA‑CCTGCTTCAGCCAGAAAACGCGCCCAATCGACAAATTTGCCt                                                                                 >  2:1824068/1‑289 (MQ=255)
                                                                                                                                                                                                 ctctGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGc                                                                            <  1:567105/288‑1 (MQ=255)
                                                                                                                                                                                                 ctctGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGCa                                                                           <  1:1703101/289‑1 (MQ=255)
                                                                                                                                                                                                 cctcgTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGCa                                                                           <  1:1478507/285‑1 (MQ=255)
                                                                                                                                                                                                    tGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGCAATg                                                                        >  1:105730/1‑289 (MQ=255)
                                                                                                                                                                                                            gACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGCAATGTCCAGTTc                                                                >  2:1741874/1‑289 (MQ=255)
                                                                                                                                                                                                             aCCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCtt                                                                                                                    <  1:270148/236‑1 (MQ=255)
                                                                                                                                                                                                                aTCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCCAACAGCCACTCATCGCCTTTCGCCACCCCAGGCACTGGCGTGCCGTCGTTTTCTTCCTCGCGCTCTTTGCTGCCTAACAGCGT‑TCGCCAGCCTGCTTCATCAAGAAAAACACTTTTAGCGACAAATTTCACTTTGGCGATGTCCAGTTCGATa                                                            >  2:1400587/1‑289 (MQ=255)
                                                                                                                                                                                                                aTCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCtt                                                                                                                                                   <  2:1950071/203‑1 (MQ=255)
                                                                                                                                                                                                                aTCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCtt                                                                                                                                                   >  1:1950071/1‑203 (MQ=255)
                                                                                                                                                                                                                aTCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGCAATGTCCAGTTCGATa                                                            >  2:1766144/1‑289 (MQ=255)
                                                                                                                                                                                                                aTCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGCAATGTCCAGTTCGATa                                                            >  1:952542/1‑289 (MQ=255)
                                                                                                                                                                                                                     tCGAACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGCAATGTCCAGTTCGATAacac                                                        <  1:1450603/288‑1 (MQ=255)
                                                                                                                                                                                                                      cGCACGGAGGATCTTTGTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGAGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGCAATGTCCAGTTCGATAacacac                                                      <  1:992992/289‑1 (MQ=255)
                                                                                                                                                                                                                                       tCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCcg                                                                                                                                                                         >  1:1284521/1‑158 (MQ=255)
                                                                                                                                                                                                                                           aTCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTtg                                                                                                                                                 >  2:1244869/1‑178 (MQ=255)
                                                                                                                                                                                                                                            tCTTTATACTGCACAACGCGCGAGATCCCGGTCATGGGCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGCAATGTCCAGTTCGATAACACACTTGCGGAACACCGCATCCggg                                 <  2:35675/288‑1 (MQ=255)
                                                                                                                                                                                                                                                tATCCTGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGCAATGTCCAGTTCGATAACACACGTGCGGAACACCGCATCCGGGCAGaa                            <  1:1693182/289‑1 (MQ=255)
                                                                                                                                                                                                                                                     tggacacAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGCAATGTCCAGTTCGATAACACACTTGCGGAACACCGCATCCGGGCAGAATTGCa                       <  2:1759110/286‑1 (MQ=255)
                                                                                                                                                                                                                                                     tGCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGCAATGTCCAGTTCGATAACACACTTGCGGAACACCGCATCCGGGCAGAATTGCa                       <  1:1766144/289‑1 (MQ=255)
                                                                                                                                                                                                                                                      gCACAAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGCAATGTCCAGTTCGATAACACACTTGCGGAACACCGCATCCGGGCAGAATTGCAt                      <  1:1534512/289‑1 (MQ=255)
                                                                                                                                                                                                                                                       cacaAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCcg                                                                                                                                                                         >  1:1803902/1‑142 (MQ=255)
                                                                                                                                                                                                                                                       cacaAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCtt                                                                                                                                                   <  2:307207/164‑1 (MQ=255)
                                                                                                                                                                                                                                                       cacaAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCtt                                                                                                                                                   >  1:307207/1‑164 (MQ=255)
                                                                                                                                                                                                                                                       cacaAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGCAATGTCCAGTTCGATAacac                                                        <  2:620838/254‑1 (MQ=255)
                                                                                                                                                                                                                                                       cacaAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGCAATGTCCAGTTCGATAACACACTTGCGGAACACCGCATCCGGGCAGAATTGCAt                      >  2:1724270/1‑288 (MQ=255)
                                                                                                                                                                                                                                                       cacaAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCCCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTCGCGACAAATTTGCCTTTGGCCATTTCCAGTTCGATAACCCTCTTGCGGAAAACCGCATCCGGTCAGatcagcat                      >  2:1954820/1‑281 (MQ=255)
                                                                                                                                                                                                                                                       cacaAAGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACAAAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGCAATGTCCAGTTCGCGAACACACTTTCGGAACACCGCATCCGGGCAGAATCGCac                      >  2:1677794/1‑287 (MQ=255)
                                                                                                                                                                                                                                                          aaaGCTCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGCAATGTCCAGTTCGATAACACACTTGCGGAACACCGCATCCGGGCAGAATTGCATCAGa                  <  1:1682071/289‑1 (MQ=255)
                                                                                                                                                                                                                                                            aGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGCAATGTCCAg                                                                   >  1:345272/1‑238 (MQ=255)
                                                                                                                                                                                                                                                            aGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGCAATGTCCAGTTCGATAACACACTTGCGGAACACCGCATCCGGGCAGAATTGCATCAGAt                 >  1:1199851/1‑288 (MQ=255)
                                                                                                                                                                                                                                                            aGCGCGCGATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTAACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCGTCATCGCCCTCTTTCCTGCCCACCAGCGT‑GCGCCAGCCTGCTTCAGCAAGAATACGCGACTTACCGACAGTCTTGCCTTTGGCACTGTCCAGTTCGATACCACCCTCCACGAATACCGTCTCCGGGCCGAATTGCATCACAt                 >  2:1605030/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                 gcgATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGCAATGTCCAGTTCGATAACACCCTTGCGGAAAACCGCATCCGGGACGAATTGCACAAGATACTGaa           >  2:206164/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                 gcgATCCCGGTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGCAATGTCCAGTTCGATAACACACTTGCGGAACACCGCATCCGGGCAGAATTGCATCAGATACTGAc           >  1:553456/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                         ggTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGCAATGTCCAGTTCGATAACACACTTGCGGAACACCGCATCCGGGCAGAATTGCATCAGATACTGACGGGCAATc   <  2:1199851/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                         ggTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGCAATGTCCAGTTCGATAACACACTTGCGGAACACCGCATCCGGGCAGAATTGCATCAGATACTGACGGGCAATc   <  1:1416147/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                         ggTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGCAATGTCCAGTTCGATAACACACTTGCGGAACACCGCATCCGGGCAGAATTGCATCAGATACTGACGGGCAATc   <  1:676199/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                         ggTCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGCAATGTCCAGTTCGATAACACACTTGCGGAACACCGCATCCGGGCAGAATTGCATCAGATACTGACGGGCAATc   <  2:336637/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                           tCATCGCCGAAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGCAATGTCCAGTTCGATAACACACTTGCGGAACACCGCATCCGGGCAGAATTGCATCAGATACTGACGGGCAATCa  <  1:421413/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                  |||                                                                                                                                                                                                                                                                                        
CCTGATAGCGACACTGCTTTTCGCTGATTTGCGTCAGCACGCTTTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGGCTATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATCGCGCTAAGCAGTGTTGCAT‑CGGTAAAATGGCGCGGCGGCTGGGTTTGCCGCTCTACCACTTCACCTTTTTCACACAGCAACTCATCGCCTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTTGCTGCCTAACAGCGT‑GCGCCAGCCTGCTTCAGCAAGAAAACGCGCTTTAGCGACAAATTTGCCTTTGGCAATGTCCAGTTCGATAACACACTTGCGGAACACCGCATCCGGGCAGAATTGCATCAGATACTGACGGGCAATCA  >  CP042583/1527249‑1527803

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A