Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,630,287 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,630,2870GC98.7% 534.6 / NA 232intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/3);  new base C (118/111);  total (118/114)
Fisher's exact test for biased strand distribution p-value = 1.17e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,630,2880CG99.6% 541.2 / NA 232intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (118/112);  total (118/114)
Fisher's exact test for biased strand distribution p-value = 4.89e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,630,2890TA99.6% 543.8 / NA 232intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (117/114);  minor base C (1/0);  total (118/114)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 232 total aligned reads displayed.

CCAAGGTCTTTACCCACTTTCAGGCGCAGTGCACCCATCGCGTCGGCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGGCTTGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGCCACAGATGACGCACCAGCGCTTCCATCACTTCACGCACTTGCGGCGCGGTCATGAAAGAAGTTT  >  CP042583/1630018‑1630567
                                                                                                                                                                                                                                                                             |||                                                                                                                                                                                                                                                                                      
ccAAGGTCTTTACCCACTTTCAGGCGCAGTGCACCCATCGCGTCGGCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGaa                                                                                                                                                                                                                                                                          <  1:809571/286‑1 (MQ=255)
 cAAGGTCTTTACCCACTTTCAGGCGCAGTGCACCCATCGCGTCGGCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAAcgcg                                                                                                                                                                                                                                                                      <  2:1695576/289‑1 (MQ=255)
    ggTCTTTACCCACTTTCAGGCGCAGTGCACCCATCGCGTCGGCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCag                                                                                                                                                                                                                                                                   >  1:524912/1‑289 (MQ=255)
    ggTCTTTACCCACTTTCAGGCGCAGTGCACCCATCGCGTCGGCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCag                                                                                                                                                                                                                                                                   >  1:1375644/1‑289 (MQ=255)
     gTCTTTACCCACTTTCAGGCGCAGTGCACCCATCGCGTCGGCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATCCGCCGCCCGGAACGCGCaga                                                                                                                                                                                                                                                                  >  2:1760466/1‑289 (MQ=255)
         ttACCCACTTTCAGGCGCAGTGCACCCATCGCGTCGGCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCgccgcc                                                                                                                                                                                                                                                                               <  1:1634404/272‑1 (MQ=255)
                cTTTCAGGCGAAGTGCACCCACGGCGTCGGCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTAcgcg                                                                                                                                                                                                                                                       <  2:755786/289‑1 (MQ=255)
                           aGTGCACCCATCGCGTCGGCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGa                                                                                                                                                                                                                                             >  1:1126992/1‑288 (MQ=255)
                             tGCACCCATCGCGTCGGCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGc                                                                                                                                                                                                                                                                <  1:833759/267‑1 (MQ=255)
                                  ccATCGCGTCGGCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGc                                                                                                                                                                                                                                     <  2:887543/289‑1 (MQ=255)
                                    ttCGCGACGGACACAATTTTCTGGTTGTCGGCAACGAAGAAAATCAGATCGCCATCTTGCGCGGCAGTCCTGTCCAGGATGTCTTGGATGATTTCTGCATTAAGGAACGTCGCTACCGGGATGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAGGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGGCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGcgg                                                                                                                                                                                                                                   <  2:1554784/288‑3 (MQ=255)
                                    aTCGCGTCGGCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCg                                                                                                                                                                                                                                   <  2:77037/289‑1 (MQ=255)
                                     tCGCGTCGGCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCg                                                                                                                                                                                                                                   >  2:1870816/1‑288 (MQ=255)
                                      cgcgTCGGCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGa                                                                                                                                                                                                                                 <  1:1053069/289‑1 (MQ=255)
                                         gTCGGCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCt                                                                                                                                                                                                                              <  2:1044519/289‑1 (MQ=255)
                                               aacaaTTTTCTTTTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCTGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCaaa                                                                                                                                                                                                                         <  1:364761/288‑1 (MQ=255)
                                               aacaaTTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCaaa                                                                                                                                                                                                                         <  2:553348/288‑1 (MQ=255)
                                                                              aTCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTATGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAg                                                                                                                                                                                         <  1:1854345/289‑1 (MQ=255)
                                                                                   atCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACg                                                                                                                                                                                    <  1:885328/289‑1 (MQ=255)
                                                                                        cggcTTGCGCTGCAGTACGCTCCAGGATGTCTTCGATGATTTCTGCATTAAGGAGCTTAGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGTGTTCGTTAACTTTGATGTAAGCCAGTCCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACgtcagt                                                                                                                                                                               <  1:413881/286‑1 (MQ=255)
                                                                                        cATCTTGCGCGGCATGCCGCTACGAGATGTCTTCGATGCTTTCTGCGTTAAGGAACTTCGCTACCGTGCTGTTGGTACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCGTTCGCGCCGTAGATTTTACCGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGTCCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACgtcagt                                                                                                                                                                               <  2:579057/289‑1 (MQ=255)
                                                                                        cATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACgtcagt                                                                                                                                                                               <  1:931245/289‑1 (MQ=255)
                                                                                          tCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAg                                                                                                                                                                                         <  1:1359128/277‑1 (MQ=255)
                                                                                          tCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACgtcagtca                                                                                                                                                                             <  1:1152572/289‑1 (MQ=255)
                                                                                                gcgGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCa                                                                                                                                                                       <  1:1617932/289‑1 (MQ=255)
                                                                                                 gtcgggTACGTTCCAGGATGTCGTCTATGATTTCGGCATTAGGGGTCTTCGCTACCGGGCTGTGGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGAGCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCa                                                                                                                                                                       <  2:1084981/283‑1 (MQ=255)
                                                                                                 cgGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCa                                                                                                                                                                       >  2:1775125/1‑288 (MQ=255)
                                                                                                          gATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACg                                                                                                                                                             <  1:164970/289‑1 (MQ=255)
                                                                                                              cAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGa                                                                                                                                                                                                                                 <  1:539640/217‑1 (MQ=255)
                                                                                                              cAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGa                                                                                                                                                         <  1:1955914/289‑1 (MQ=255)
                                                                                                                 gATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCt                                                                                                                                                                                                                              <  2:1334261/217‑1 (MQ=255)
                                                                                                                 gATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCt                                                                                                                                                                                                                              >  1:1334261/1‑217 (MQ=255)
                                                                                                                 gATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATc                                                                                                                                                       >  2:1684798/1‑288 (MQ=255)
                                                                                                                      cTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGc                                                                                                                                                                                                                   >  2:923993/1‑223 (MQ=255)
                                                                                                                      cTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCCACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGttt                                                                                                                                                 >  2:456052/1‑289 (MQ=255)
                                                                                                                      cTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCa                                                                                                                                                                       >  1:1824482/1‑267 (MQ=255)
                                                                                                                      cTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGttt                                                                                                                                                 >  2:157988/1‑289 (MQ=255)
                                                                                                                      cTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGttt                                                                                                                                                 >  1:506138/1‑289 (MQ=255)
                                                                                                                      cTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGttt                                                                                                                                                 >  1:1687123/1‑289 (MQ=255)
                                                                                                                      cTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGttt                                                                                                                                                 >  2:1853089/1‑289 (MQ=255)
                                                                                                                      cTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGttt                                                                                                                                                 >  1:1222093/1‑289 (MQ=255)
                                                                                                                      cTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGttt                                                                                                                                                 >  1:766719/1‑289 (MQ=255)
                                                                                                                      cTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTCCAGCAGAACCGCCACGTCAGTCAGTTCCATCGGGTTACGCAGAGCCGGttt                                                                                                                                                 >  2:1955914/1‑289 (MQ=255)
                                                                                                                      cTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACCCAACAAATTTCAGCCGATCAGCCACGTCAGTTAGTTCCATCGGGTTACCCAGATCCGGgtt                                                                                                                                                 >  2:54315/1‑289 (MQ=255)
                                                                                                                           atgatTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAg                                                                                                                                            >  1:1691486/1‑289 (MQ=255)
                                                                                                                           atgatTCCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAg                                                                                                                                            <  2:112018/289‑1 (MQ=255)
                                                                                                                            tgttttCTGCATTAAGGAAGTTGGCTACCGGGCTGTGGTTACCTCCCAGCCGTGTCGGGCGTTCGTTAACTTTGAGGTAGGCCAGACCGTTCGCGCCGTAGATTTTAACGAAGTTACCGGATTCGTCGAGCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAg                                                                                                                                            <  2:1032358/285‑1 (MQ=255)
                                                                                                                            tgatctgttcATTAGGGACCTTCGTTACCGGGCTGTTGTTCCCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGTTGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAg                                                                                                                                            <  2:743856/279‑1 (MQ=255)
                                                                                                                               tttCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCa                                                                                                                                                                       >  2:1794447/1‑258 (MQ=255)
                                                                                                                                   tGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATaa                                                                                                                                    <  2:1432802/289‑1 (MQ=255)
                                                                                                                                     cATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACg                                                                                                                                  >  2:1640118/1‑289 (MQ=255)
                                                                                                                                          aGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGt                                                                                                                              >  1:994890/1‑288 (MQ=255)
                                                                                                                                             aaCTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTc                                                                                                                            <  1:1084306/287‑1 (MQ=255)
                                                                                                                                               cTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGAt                                                                                                                                                                                                      >  1:323642/1‑211 (MQ=255)
                                                                                                                                               cTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGAt                                                                                                                                                                                                      <  2:323642/211‑1 (MQ=255)
                                                                                                                                               cTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCt                                                                                                                        >  1:704086/1‑289 (MQ=255)
                                                                                                                                                 tCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCtt                                                                                                                       >  1:919057/1‑288 (MQ=255)
                                                                                                                                                  cGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTcc                                                                                                                     >  1:687700/1‑289 (MQ=255)
                                                                                                                                                    cTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGTTTACGCAGACCCGGTTTATCAGAACCATAACGGCGTTCTGCTTcct                                                                                                                    >  2:20923/1‑287 (MQ=255)
                                                                                                                                                    cTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGttctgcttctgc                                                                                                                   >  1:1207649/1‑289 (MQ=255)
                                                                                                                                                     tACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCa                                                                                                                  <  2:1632341/289‑1 (MQ=255)
                                                                                                                                                          ggCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTAcgcg                                                                                                                                                                                                                                                       >  2:439264/1‑151 (MQ=255)
                                                                                                                                                               ttGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCAtt                                                                                                         >  2:655556/1‑288 (MQ=255)
                                                                                                                                                                         ccAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAAt                                                                                               >  2:873519/1‑288 (MQ=255)
                                                                                                                                                                            gacctgttggctgttcgttAACTTTGGTGTATGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGcc                                                                                           <  2:148988/277‑1 (MQ=255)
                                                                                                                                                                             tcctttctgtggttcgttAACTTTGAGGTAGGCCGTACTTTTCGCGCCGTTGATCTTAACAAAGTTACCGTATGCGTCGATCTCCGTACGGGTCGGCGATGCGCCGCCCGGAACGCGCAGGGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGccc                                                                                          <  2:637075/278‑1 (MQ=255)
                                                                                                                                                                             aCCTTTCGCGCGTTGGTTAACGTTGAGGGAGGCCAGACGTGTCGGGCCGGGAATTTTAACGAAGTTACCGTATTCGGCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGcc                                                                                           <  2:1825988/288‑1 (MQ=255)
                                                                                                                                                                             aCCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGcc                                                                                           <  2:1222093/288‑1 (MQ=255)
                                                                                                                                                                              ccTTTTGCGCGTTCTGTAACGTTGATGACAGCCAGACCCTCCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCa                                                                                         <  2:582736/289‑1 (MQ=255)
                                                                                                                                                                              ccTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGAGTTTAACGAAGTTACCGTATTCGTCGAGCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCa                                                                                         <  1:467384/289‑1 (MQ=255)
                                                                                                                                                                                tttCGCGCGTTCGTTAACTTTGATGTAAGCCAGCCCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCCGCAAATGCAGCAAACTCACCAGATCTCAGCAGCTCAGCAACTTCCGTCAGTTCCATCGGGATACGCAAATCCGGTTTATCGTCACCATAACGGCGTTCTTCTTCCTCCAAGGTCATTACCGGGAAATCCCCCAg                                                                                        >  2:1826968/1‑288 (MQ=255)
                                                                                                                                                                                 ttCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGaaa                                                                                                >  2:1708043/1‑279 (MQ=255)
                                                                                                                                                                                 ttCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGa                                                                                       >  1:1756294/1‑288 (MQ=255)
                                                                                                                                                                                  tCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGcc                                                                                                                                                                                                                                                               <  1:580688/119‑1 (MQ=255)
                                                                                                                                                                                  tCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGc                                                                                                                                                                                                                   <  2:1289799/163‑1 (MQ=255)
                                                                                                                                                                                  tCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGAt                                                                                      >  2:356282/1‑288 (MQ=255)
                                                                                                                                                                                      gcgTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCcaca                                                                                 <  1:1555388/289‑1 (MQ=255)
                                                                                                                                                                                      gcgTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCcaca                                                                                 <  1:39143/289‑1 (MQ=255)
                                                                                                                                                                                           cgttAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGt                                                                                                             <  1:1631473/256‑1 (MQ=255)
                                                                                                                                                                                           cgttAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCtt                                                                            <  1:101039/289‑1 (MQ=255)
                                                                                                                                                                                              tAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCa                                                                          <  1:440529/288‑1 (MQ=255)
                                                                                                                                                                                                 cTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCTTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTc                                                                      <  1:1922296/289‑1 (MQ=255)
                                                                                                                                                                                                    tGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGccc                                                                                          <  1:644867/266‑1 (MQ=255)
                                                                                                                                                                                                                 aCCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGCCACAGATGACg                                                       >  2:227663/1‑288 (MQ=255)
                                                                                                                                                                                                                     ttCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCcac                                                                                  <  2:2985/257‑1 (MQ=255)
                                                                                                                                                                                                                     ttCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCcac                                                                                  >  1:2985/1‑257 (MQ=255)
                                                                                                                                                                                                                     ttCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGCCACAGATGACGCACCa                                                  >  1:1496552/1‑289 (MQ=255)
                                                                                                                                                                                                                      tCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGCCACAGATGACGCACCa                                                  >  1:1475184/1‑288 (MQ=255)
                                                                                                                                                                                                                      tCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGCCACAGATGACGCACCa                                                  >  1:107712/1‑288 (MQ=255)
                                                                                                                                                                                                                       cgcgCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGCCACAGATGACGCACCAgc                                                >  1:110138/1‑289 (MQ=255)
                                                                                                                                                                                                                               aGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGCCACAGATGACGCACCAGCGCTTCCa                                         <  1:227663/288‑1 (MQ=255)
                                                                                                                                                                                                                               aGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGCCACAGATGACGCACCAGCGCTTCCAt                                        <  2:1183908/289‑1 (MQ=255)
                                                                                                                                                                                                                                      aaCGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGCCACAGATGACGCACCAGCGCTTCCATCACTTCa                                 <  1:20923/289‑1 (MQ=255)
                                                                                                                                                                                                                                           aGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGaaa                                                                                                >  2:498312/1‑221 (MQ=255)
                                                                                                                                                                                                                                           aGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGCCACAGATGACGCACCAGCGCTTCCATCACTTCACGCa                             >  2:1285939/1‑288 (MQ=255)
                                                                                                                                                                                                                                                    aTTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGCCACAGATGACGCACCAGCGCTTCCATCACTTCACGCACTTgcggcg                    <  1:1775125/288‑1 (MQ=255)
                                                                                                                                                                                                                                                     ttCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGCCACAGATGACGCACCAGCGCTTCCATCACTTCACGCACTTGCGGcgcg                  >  2:1133717/1‑289 (MQ=255)
                                                                                                                                                                                                                                                              cTGGTTACGGGTCAGCGATGCGCCGGCCGGAAATCGCAGGGCCGCTACTCGACGTGTCGGATCGTTCGTCGGACCTGCAAATACAGCACACTCAACAGATTTCAGCATATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGCCACAGATGACGCACCAGCGCTTCCATCACTTCACGCACTTGCGGCGCGGTCATGaaa         <  2:1456402/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                 cTTACGGGTCAGGAATGCGCCGCCCGGAAAGCGCAGAGCCGATACGCGACCTTTCTGATCGGTCGCCGGACCTGCAAATAAAGACAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGCCACAGATGACGCACCAGCGCTTCCATCACTTCACGCACTTGCGGCGCGGTCATGAaaga       <  2:1622325/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                   tACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGCCACAGATGACGCACCAGCGCTTCCATCACTTCACGCACTTGCGGCGCGGTCATGAaaga       >  1:128599/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                             |||                                                                                                                                                                                                                                                                                      
CCAAGGTCTTTACCCACTTTCAGGCGCAGTGCACCCATCGCGTCGGCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTTCGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGGCTTGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGTCAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGCCACAGATGACGCACCAGCGCTTCCATCACTTCACGCACTTGCGGCGCGGTCATGAAAGAAGTTT  >  CP042583/1630018‑1630567

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A