Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,630,287 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,630,2870GC99.3% 698.1 / NA 299intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/2);  new base C (156/140);  total (156/143)
Fisher's exact test for biased strand distribution p-value = 2.26e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,630,2880CG100.0% 713.5 / NA 299intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (156/143);  total (156/143)
*CP0425831,630,2890TA99.7% 703.3 / NA 299intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (155/142);  minor base C (1/0);  total (156/143)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 299 total aligned reads displayed.

CGGTCAGACCAAGGTCTTTACCCACTTTCAGGCGCAGTGCACCCATCGCGTCGGCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGGCTTGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGCCACAGATGACGCACCAGCGCTTCCATCACTTCACGCACTTGCGGCGCGGTCATGAAAGAAGTTT  >  CP042583/1630010‑1630567
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                       
cgGTCAGACCAAGGTCTTTACCCACTTTCAGGCGCAGTGCACCCATCGCGTCGGCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCgccgcc                                                                                                                                                                                                                                                                                <  2:2185944/289‑1 (MQ=255)
            ggTCTTTACCCACTTTCAGGCGCAGTGCACCCATCGCGTCGGCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCag                                                                                                                                                                                                                                                                    >  1:1700849/1‑289 (MQ=255)
                  tACCCACTTTCAGGCGCAGTGCACCCATCGCGTCGGCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTGGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCTATCTGCTTACGGGTCAGCGATTCGCCGCACGGAACGCCCAGCGCCg                                                                                                                                                                                                                                                               >  2:141378/1‑288 (MQ=255)
                      cattttacggCGCAGGGCACCAATGCGGTCGGCAACAATTTTCTTGTTGTCGGAACCGAAGAAAAGCATATCGCCACCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTAcg                                                                                                                                                                                                                                                          <  2:1499259/281‑1 (MQ=255)
                        cTTTCAGGCGCAGTGCACCCATCGCGTCGGCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTAcgc                                                                                                                                                                                                                                                         >  2:564955/1‑288 (MQ=255)
                                     tGCACCCATCGCGTCGGCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCg                                                                                                                                                                                                                                           >  1:1581584/1‑289 (MQ=255)
                                            aTCGCGTCGGCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGACCGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCg                                                                                                                                                                                                                                    >  1:1487885/1‑289 (MQ=255)
                                            aTCGCGTCGGCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCg                                                                                                                                                                                                                                    <  1:2557258/289‑1 (MQ=255)
                                             tCGCGTCGGCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTAcgcg                                                                                                                                                                                                                                                        >  2:1337419/1‑268 (MQ=255)
                                               gcgTCGGCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGa                                                                                                                                                                                                                                  >  1:2264605/1‑288 (MQ=255)
                                               gcgTCGGCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGa                                                                                                                                                                                                                                  >  2:515792/1‑288 (MQ=255)
                                                    ggCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCTCCGCCCGGCACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTCCGCCGGCCCGGCa                                                                                                                                                                                                                            >  2:1541066/1‑289 (MQ=255)
                                                    ggCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCTGATCGTTCGCCGGACCTGCa                                                                                                                                                                                                                            >  1:949415/1‑289 (MQ=255)
                                                      caacaaTTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTTATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTAGTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCaa                                                                                                                                                                                                                           <  1:1024637/288‑1 (MQ=255)
                                                      caacaaTTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCaaa                                                                                                                                                                                                                          >  1:643910/1‑289 (MQ=255)
                                                            ttttCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGc                                                                                                                                                                                                                    <  1:564955/289‑1 (MQ=255)
                                                                    gtgtCCGCAACGAGGGAAATGATATCGCCATCTTGGGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGCACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCaa                                                                                                                                                                                                            <  2:1362185/288‑1 (MQ=255)
                                                                     tgtCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCaa                                                                                                                                                                                                            <  1:2424242/288‑1 (MQ=255)
                                                                       tCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTCCCCGACCTTTCGGATCGTTCGCCCGACCTGCCAATACAGCAAACTCAACAg                                                                                                                                                                                                         >  2:1971167/1‑289 (MQ=255)
                                                                                               ccATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACgt‑cag                                                                                                                                                                                >  1:2065668/1‑289 (MQ=255)
                                                                                                       cgcgGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCACATACAGCAAACTCAAAAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTc                                                                                                                                                                         >  1:1864126/1‑288 (MQ=255)
                                                                                                         cgGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCa                                                                                                                                                                       <  1:1350448/288‑1 (MQ=255)
                                                                                                              gTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGAACAGCAACGT‑ACGTCCATTCCATCGGGt                                                                                                                                                                 >  2:1479372/1‑289 (MQ=255)
                                                                                                                    tCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGTGTTACGCa                                                                                                                                                           >  2:158460/1‑289 (MQ=255)
                                                                                                                           tGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCgg                                                                                                                                                    >  2:729004/1‑289 (MQ=255)
                                                                                                                            gTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGt                                                                                                                                                   <  2:2441712/289‑1 (MQ=255)
                                                                                                                              cTTCGTAGACTTCTGAATTAAGGGAATTCGCTACCGGGCTGTTGATACCTTCCAGGCATTTCGCGCGTT‑CGTTAACTTTGATGTAAGACATACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGttt                                                                                                                                                 <  2:847687/289‑1 (MQ=255)
                                                                                                                              cTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTAcgcg                                                                                                                                                                                                                                                        <  1:450075/187‑1 (MQ=255)
                                                                                                                              cTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACa                                                                                                                                                                                                                      >  2:899307/1‑221 (MQ=255)
                                                                                                                              cTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACa                                                                                                                                                                                                                      <  1:899307/221‑1 (MQ=255)
                                                                                                                              cTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCCAACTCAACAGATTTCAGCAGATCAGCAACGT‑TGGTCAGTTCCATCGGGCTTCGCAGATCCGGttt                                                                                                                                                 >  2:2245811/1‑289 (MQ=255)
                                                                                                                              cTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCaa                                                                                                                                                                                                            <  1:2123442/231‑1 (MQ=255)
                                                                                                                              cTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTcag                                                                                                                                                                                                  <  1:1897562/241‑1 (MQ=255)
                                                                                                                              cTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACg                                                                                                                                                                                     <  2:2150292/254‑1 (MQ=255)
                                                                                                                              cTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACg                                                                                                                                                                                     <  1:2011535/254‑1 (MQ=255)
                                                                                                                              cTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGttt                                                                                                                                                 >  1:2318313/1‑289 (MQ=255)
                                                                                                                              cTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGttt                                                                                                                                                 >  2:680008/1‑289 (MQ=255)
                                                                                                                              cTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGttt                                                                                                                                                 >  1:1961446/1‑289 (MQ=255)
                                                                                                                              cTTCGATGATTTCTGCATTAACGACCTTCGCTACCGGGCTGTTGCTACCTTCCTGACCTTTCGCGCGTT‑CGTTAACCTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCTCAGGCCCCCGACGCGCACTTCCGGCTCCTTCGCCGGCACCGCCAATACAGTAAACACAACAGATTTTGACAAATCAGCGACCT‑CAGTCAGTTCCATAGGGTTCAGCAGAACCGGatt                                                                                                                                                 >  2:1141096/1‑289 (MQ=255)
                                                                                                                                   atgatTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAg                                                                                                                                            >  2:122744/1‑289 (MQ=255)
                                                                                                                                    tgatTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAg                                                                                                                                            <  1:729004/288‑1 (MQ=255)
                                                                                                                                    tgatTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAg                                                                                                                                            <  1:365888/288‑1 (MQ=255)
                                                                                                                                    tgatTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAg                                                                                                                                            <  1:515792/288‑1 (MQ=255)
                                                                                                                                    tgatTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAg                                                                                                                                            <  2:1700849/288‑1 (MQ=255)
                                                                                                                                           tGCATTAAGGAACTTCGCTACCGGGATGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATaa                                                                                                                                    <  1:2482416/289‑1 (MQ=255)
                                                                                                                                                  aGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTACCGAAGTTACCGTATTCTTCGATCTGCTTCCGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCTGCTACTCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATATCGCCGtt                                                                                                                             >  1:2521199/1‑289 (MQ=255)
                                                                                                                                                  aGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCGGAACCGGTTTATCAGACACATAAAGGCGt                                                                                                                              >  2:1731034/1‑288 (MQ=255)
                                                                                                                                                  aGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGt                                                                                                                              >  1:321170/1‑288 (MQ=255)
                                                                                                                                                      aCTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTTTTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGc                                                                                                                         <  2:1771838/289‑1 (MQ=255)
                                                                                                                                                             tACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCa                                                                                                                  <  2:780696/289‑1 (MQ=255)
                                                                                                                                                                       ttGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCAtt                                                                                                         >  1:925457/1‑288 (MQ=255)
                                                                                                                                                                         gATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTAcc                                                                                                      >  1:1794715/1‑289 (MQ=255)
                                                                                                                                                                           tACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCg                                                                                                     <  1:122744/288‑1 (MQ=255)
                                                                                                                                                                            aCCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGa                                                                                                                                                                                                                                  >  1:1639256/1‑163 (MQ=255)
                                                                                                                                                                            aCCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGCAGCTTCTATCGAAGTTACCGTATTCGTCGATCTGCTTCCGGGTCAGCGCTGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTCTCGCATCGTTCGCCGGACCTGCCAATACAGCAACCCCACCAGCATTCCGCAGATCAGCAACGTCCAGT‑AGCGCCATCTGCTTACTCAGACACGGTTTATCAGGAGAATAACGAGGTTCCTCTTCCGGAAGTGTCAGTACTggt                                                                                                   >  2:2017296/1‑288 (MQ=255)
                                                                                                                                                                              cTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGa                                                                                                                                                                                              <  1:2732529/197‑1 (MQ=255)
                                                                                                                                                                              cTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGa                                                                                                                                                                                              >  2:2732529/1‑197 (MQ=255)
                                                                                                                                                                               ttCCAGACCTGTCGCGCGTT‑CTTTAAATTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTGTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGaaa                                                                                                <  1:1324449/289‑1 (MQ=255)
                                                                                                                                                                                 ccAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTACGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGc                                                                                                                         <  1:2192981/262‑1 (MQ=255)
                                                                                                                                                                                     aCCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGcc                                                                                           <  2:925457/288‑1 (MQ=255)
                                                                                                                                                                                      ccTTTCTCGCGTT‑CGTTACCGTTGATGTAAGCCAGCCCTTTCGGGCCGTAGATTTTAACCAAGTTACCGTGTTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCa                                                                                         <  2:586202/289‑1 (MQ=255)
                                                                                                                                                                                      ccTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGcc                                                                                           <  2:1014832/287‑1 (MQ=255)
                                                                                                                                                                                      ccTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCa                                                                                         <  1:680008/289‑1 (MQ=255)
                                                                                                                                                                                      ccTTTCGC‑CGTTGCGTTAACTTTGTGTTAAGCCACACCTTCCTCCCCGTAGATTTTCACGACGTTACAGTCTTCTTCGATGGCCTTACGGTTCCGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTAGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCa                                                                                         <  2:1884268/289‑1 (MQ=255)
                                                                                                                                                                                      ccTTGCGCGTGTT‑CGGTAAATTTGATGTAAGCCTGGCGTTTTGGGCCTTAGATTTGAACGAAGTTACCGTCTTCGTCGGTCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCa                                                                                         <  2:2536830/289‑1 (MQ=255)
                                                                                                                                                                                         ttCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGa                                                                                                                                                                                                                                  <  2:487646/150‑1 (MQ=255)
                                                                                                                                                                                         ttCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGa                                                                                                                                                                                                                                  >  1:487646/1‑150 (MQ=255)
                                                                                                                                                                                         ttCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGa                                                                                       >  1:1388521/1‑288 (MQ=255)
                                                                                                                                                                                          tCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCCAAGGTCATTACCGGGAAATCGCCCAGAt                                                                                      >  1:2405520/1‑288 (MQ=255)
                                                                                                                                                                                          tCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGAt                                                                                      >  1:1264676/1‑288 (MQ=255)
                                                                                                                                                                                            gcgcgTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCca                                                                                   <  1:1420693/289‑1 (MQ=255)
                                                                                                                                                                                            gcgcgTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCca                                                                                   <  1:1479372/289‑1 (MQ=255)
                                                                                                                                                                                              gcgTT‑CGTTAGCTTTTATGTGATCGAGACCTTTCGCGCCGTATATTTTAACGTAGTTACCGTATGCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGGGCAGAGCCGCCACGCGACCTTTCGGATCGTTGGCCGGACCTGCAAATACAGCCAACGCAGCAGATTTCAGCGGATCATCAACGT‑CGGTCAGTTCCATCGGGTTACGCAGAGCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCcaca                                                                                 <  2:2681792/289‑1 (MQ=255)
                                                                                                                                                                                               cgtt‑cgttAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACgt                                                                                                                                                                                    >  1:412681/1‑190 (MQ=255)
                                                                                                                                                                                               agtt‑cgttAACTTGGATGTAGGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCcaca                                                                                 <  2:2282649/287‑1 (MQ=255)
                                                                                                                                                                                                          cTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTc                                                                      <  1:1736727/289‑1 (MQ=255)
                                                                                                                                                                                                          cTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTc                                                                      <  2:1899275/289‑1 (MQ=255)
                                                                                                                                                                                                             tGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCa                                                                    >  1:1183993/1‑288 (MQ=255)
                                                                                                                                                                                                             tGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCa                                                                    >  2:1208668/1‑288 (MQ=255)
                                                                                                                                                                                                             tGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCAAACCCTTCAcctaca                                                                    >  2:1305464/1‑283 (MQ=255)
                                                                                                                                                                                                               aTGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGcc                                                                                           >  1:263105/1‑263 (MQ=255)
                                                                                                                                                                                                               aTGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGcc                                                                                           <  2:263105/263‑1 (MQ=255)
                                                                                                                                                                                                               aTGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGcc                                                                 >  1:1086353/1‑289 (MQ=255)
                                                                                                                                                                                                                    aGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGCCACAGa                                                            >  1:2389010/1‑289 (MQ=255)
                                                                                                                                                                                                                         gACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGaaa                                                                                                >  1:631535/1‑248 (MQ=255)
                                                                                                                                                                                                                              ttCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCa                                                                                                                  >  1:1523854/1‑225 (MQ=255)
                                                                                                                                                                                                                              ttCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGCCACAGATGACGCACCa                                                  >  2:417845/1‑289 (MQ=255)
                                                                                                                                                                                                                              tgcgggcCGGAGATTTTAACGAAGTGACCCGATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGCCACAGATGACGCACCa                                                  <  2:432309/284‑1 (MQ=255)
                                                                                                                                                                                                                               tCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCa                                                                                                                                                                       <  1:433882/171‑1 (MQ=255)
                                                                                                                                                                                                                                cgcgCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAACCACAGATGACGAACCAg                                                 >  1:2164944/1‑288 (MQ=255)
                                                                                                                                                                                                                                               aaCGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGCCACAGATGACGCACCAGCGCTTCCATCACTTCa                                 <  2:1086353/289‑1 (MQ=255)
                                                                                                                                                                                                                                                 cGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGACGCTACGCGACCTTTCGGAGCGTTTGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGGTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGAGCCACACCCTTCACTTCCAGCCACAGATGACACACCAGAGCTTCCATCCCTTAAc                                >  2:353195/1‑288 (MQ=255)
                                                                                                                                                                                                                                                             aTTCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCACCAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTTCGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGCCACAGATGACGCACCAGCGCTTCCATCACTTCACGCACTTgcggcg                    >  2:18562/1‑288 (MQ=255)
                                                                                                                                                                                                                                                             aTTCGGCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGCCACAGATGACGCACCAGCGCTTCCATCACTTCACGCACTTgcggcg                    <  2:1264676/288‑1 (MQ=255)
                                                                                                                                                                                                                                                              ttCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAg                                                                                                                                            <  2:2562980/167‑1 (MQ=255)
                                                                                                                                                                                                                                                              ttCGTCGATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGCCACAGATGACGCACCAGCGCTTCCATCACTTCACGCACTTGCGGcgcg                  >  1:2283104/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                    gATCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGCCACAGATGACGCACCAGCGCTTCCATCACTTCCCGCACTTGCGGCCCCGTCATg            >  2:1638015/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                      tCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCTGAGCCGCTACGCGACCTTTCGGATCGCTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGCTCAGCAACGT‑CACCCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCTGTCTGCTTCCGCAAAGTGCATTACCGGGAAATCGCCCAGATCAACACCCTTCACTCCCAGCCACAGATGAACCACCCGCGCCTACACCACTCCACCTCCTTgcgcccgcgtcctgaa          >  2:2363284/1‑276 (MQ=255)
                                                                                                                                                                                                                                                                      tCTGCTTACGGGTCAGCGATGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGCCACAGATGACGCACCAGCGCTTCCa                                         >  2:635550/1‑258 (MQ=255)
                                                                                                                                                                                                                                                                           ttACGGGTCAGCGATGGGCCGCCCGGAACGCGCAGAGCCGCTACCCGACCTTTCGGATCGTTCGCCTGACCTGCAAATGCAGCAATACCAACAGATTTCAGGTGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGCCACAGATGACGCACCAGCGCTTCCATCACTTCACTCACTTGCGGCGCGGTCATGAaagaa      <  1:1141096/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                       
CGGTCAGACCAAGGTCTTTACCCACTTTCAGGCGCAGTGCACCCATCGCGTCGGCAACAATTTTCTTGTTGTCGGCACCGAAGAAAATCATATCGCCATCTTGCGCGGCAGTACGATCCAGGATGTCTTCGATGATTTCTGCATTAAGGAACTTCGCTACCGGGCTGTTGATACCTTCCAGACCTTTCGCGCGTT‑CGTTAACTTTGATGTAAGCCAGACCTTTCGCGCCGTAGATTTTAACGAAGTTACCGTATTCGTCGATCTGCTTACGGGTCAGGCTTGCGCCGCCCGGAACGCGCAGAGCCGCTACGCGACCTTTCGGATCGTTCGCCGGACCTGCAAATACAGCAAACTCAACAGATTTCAGCAGATCAGCAACGT‑CAGTCAGTTCCATCGGGTTACGCAGATCCGGTTTATCAGAACCATAACGGCGTTCTGCTTCCGCAAAGGTCATTACCGGGAAATCGCCCAGATCCACACCCTTCACTTCCAGCCACAGATGACGCACCAGCGCTTCCATCACTTCACGCACTTGCGGCGCGGTCATGAAAGAAGTTT  >  CP042583/1630010‑1630567

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A