Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,483,415 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,483,4150GC99.7% 771.2 / NA 326intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (169/156);  total (169/157)
Fisher's exact test for biased strand distribution p-value = 4.82e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,483,4160CG99.4% 769.5 / NA 326intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/2);  new base G (169/154);  total (169/157)
Fisher's exact test for biased strand distribution p-value = 2.30e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,483,4170TA99.1% 777.4 / NA 326intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (169/154);  minor base G (0/3);  total (169/157)
Fisher's exact test for biased strand distribution p-value = 1.11e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 326 total aligned reads displayed.

CTTCACCCAGTTGATATTCAAACGGGATGTTGTTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGTGGAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGGCTACCACTCGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGATACTGGTACTCTTTCAGTTTAGAACGAACAAACACTTC  >  CP042583/1483147‑1483690
                                                                                                                                                                                                                                                                            |||                                                                                                                                                                                                                                                                                 
          ttGATATTCAAACGGGATGTTGTTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGTGGAGAGTTTGACGACGAGCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTGTTCAGTACAGAAGATATGCGCGTCATCCTTGGTAAATCCACGCACGCGCATCAGGCCATGCCGCGAACCTGACGGCTCGTTACGGTGGCAGCt                                                                                                                                                                                                                                                        >  1:823474/1‑288 (MQ=255)
              tatTCAAACGGGATGTTGTTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGTGGAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCACCCTTGGTAAATCCACGCACGCGCATCAGCCCAAGCACCGAACCGGACGTCTGTTTACGGTGGCAGCTACCaa                                                                                                                                                                                                                                                   >  2:1151553/1‑289 (MQ=255)
                    accGGGATGTTGTTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGTGGAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCgg                                                                                                                                                                                                                                             <  1:379757/287‑1 (MQ=255)
                    aaCGGGATGTTGTTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGTGGAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACt                                                                                                                                                                                                                                                <  2:1345145/286‑1 (MQ=255)
                    aaCGGGATGTTGTTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGTGGAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACt                                                                                                                                                                                                                                                >  1:1345145/1‑286 (MQ=255)
                    aaCGGGATGTTGTTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGTGGAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCg                                                                                                                                                                                                                                              >  1:2564159/1‑288 (MQ=255)
                    aaCGGGATGTTGTTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACCAGTGGAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCg                                                                                                                                                                                                                                              >  1:2127615/1‑288 (MQ=255)
                              tgttTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGTGGAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCa                                                                                                                                                                                                                                    >  2:151297/1‑288 (MQ=255)
                                          gcgcAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGTGGAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATcgcg                                                                                                                                                                                                                       >  2:528685/1‑289 (MQ=255)
                                                                   aCGATACCACGTGGCGTCGCTGCCAATTCGTTTTGCAAGATGAGTGGAGAGTTTGACGACGAACTTCTCGAAGCAGATAGTGCTGTACATATCATAGACTGATCGGCTACATCCGTTAACTTCATCGCGAATTTGTACTTAAGTCCAGAAGATATGCGCGTCATCCTGCGTAGATCAACGCACGCGCATCAGGCCATGCAGCGGACAGGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTGCAGCGCCTGGTTGa                                                                                                                                                                                                <  2:1582850/287‑1 (MQ=255)
                                                                           acaTTTCGTCGCTGCCAATCCGTTTTTCAGGACGAGTGGAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATCTCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTAc                                                                                                                                                                                      <  1:961008/289‑1 (MQ=255)
                                                                               ttCGTCGCTGCCAATACGTTTTTCAGGACGAGTGGAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTg                                                                                                                                                                                   >  1:2629179/1‑288 (MQ=255)
                                                                                tcgtccCTGCCAATACGTTTTTCAGGACGAGTGGAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGAc                                                                                                                                                                                 <  2:1367059/289‑1 (MQ=255)
                                                                                 cgtcgCTGCCAATACGTTTTTCAGGACGAGTGGAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGAc                                                                                                                                                                                 >  1:423670/1‑288 (MQ=255)
                                                                                       tGCCAATACGTTTTTCAGGACGAGTGGAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCa                                                                                                                                                                          >  2:627310/1‑289 (MQ=255)
                                                                                       tGCCAATACGTTTTTCAGGACGAGTGGAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCa                                                                                                                                                                          >  1:588384/1‑289 (MQ=255)
                                                                                             tACGTTTTTCAGGACGAGTGGAGAGTTTGACGGCAATCTTATCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGTTACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAAGCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCa                                                                                                                                                                     <  2:1703226/288‑1 (MQ=255)
                                                                                             tACGTTTTTCAGGACGAGTGGAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCAt                                                                                                                                                                    <  1:627310/289‑1 (MQ=255)
                                                                                                          aCGAGTGGAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCa                                                                                                                                                        <  2:1049257/288‑1 (MQ=255)
                                                                                                               tGGAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCa                                                                                                                                                        <  1:2094019/283‑1 (MQ=255)
                                                                                                                       ttGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGtt                                                                                                                                            <  1:2036567/287‑1 (MQ=255)
                                                                                                                        tGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGaa                                                                                                                                                                                               >  2:1784106/1‑235 (MQ=255)
                                                                                                                        tGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGaa                                                                                                                                                                                               <  1:1784106/235‑1 (MQ=255)
                                                                                                                           cgacgaTCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCaga                                                                                                                                      <  1:528685/289‑1 (MQ=255)
                                                                                                                              cgaTCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCagaag                                                                                                                                    <  2:950228/288‑1 (MQ=255)
                                                                                                                              cgaTCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCagaag                                                                                                                                    <  1:1920418/288‑1 (MQ=255)
                                                                                                                              cgaTCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCagaag                                                                                                                                    <  1:2603077/288‑1 (MQ=255)
                                                                                                                                aTCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTAATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGAtg                                                                                                                                 >  1:2321230/1‑289 (MQ=255)
                                                                                                                                  cttctCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGAtgtg                                                                                                                               <  1:497044/289‑1 (MQ=255)
                                                                                                                                          aGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACAt                                                                                                                       >  1:326412/1‑289 (MQ=255)
                                                                                                                                             cAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGc                                                                                                                    <  1:1229450/289‑1 (MQ=255)
                                                                                                                                             cAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGc                                                                                                                    <  1:1807700/289‑1 (MQ=255)
                                                                                                                                                      tGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACt                                                                                                                                                                                                                                                <  1:1556050/156‑1 (MQ=255)
                                                                                                                                                      tGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGc                                                                                                                                                         <  2:2027137/243‑1 (MQ=255)
                                                                                                                                                      tGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGt                                                                                                            <  2:588384/288‑1 (MQ=255)
                                                                                                                                                             atCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGAc                                                                                                                                                                                 >  1:1650286/1‑212 (MQ=255)
                                                                                                                                                             atCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCAt                                                                                                                                                                    <  1:360630/225‑1 (MQ=255)
                                                                                                                                                             atCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATgtggtg                                                                                                                            <  2:775185/265‑1 (MQ=255)
                                                                                                                                                               cATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGc                                                                                                                    <  2:2226039/271‑1 (MQ=255)
                                                                                                                                                                  aGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACt                                                                                                                                                                                                                                                <  2:649425/144‑1 (MQ=255)
                                                                                                                                                                  aGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACt                                                                                                                                                                                                                                                >  1:649425/1‑144 (MQ=255)
                                                                                                                                                                  aGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGAt                                                                                                                                                                                                                           <  1:150953/165‑1 (MQ=255)
                                                                                                                                                                  aGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTg                                                                                               >  2:1198321/1‑289 (MQ=255)
                                                                                                                                                                  aGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTg                                                                                               >  2:2418883/1‑289 (MQ=255)
                                                                                                                                                                  aGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTg                                                                                               >  1:1480199/1‑289 (MQ=255)
                                                                                                                                                                  aGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTg                                                                                               >  2:2158827/1‑289 (MQ=255)
                                                                                                                                                                  aGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTg                                                                                               >  1:97450/1‑289 (MQ=255)
                                                                                                                                                                  aGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATCCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAAGGCAGTATTCACg                                                                                                                                               >  2:1814486/1‑241 (MQ=255)
                                                                                                                                                                    aCTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCATTGa                                                                                              >  1:912512/1‑288 (MQ=255)
                                                                                                                                                                    aCTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGa                                                                                              >  2:1917868/1‑288 (MQ=255)
                                                                                                                                                                    aCTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGa                                                                                              >  1:2143363/1‑288 (MQ=255)
                                                                                                                                                                    aCTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGa                                                                                              >  2:2474897/1‑288 (MQ=255)
                                                                                                                                                                    aCTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCG‑TACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCagaag                                                                                                                                    <  2:418175/249‑1 (MQ=255)
                                                                                                                                                                      tAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTAc                                                                                                                                                                                      >  1:1736949/1‑198 (MQ=255)
                                                                                                                                                                       aaaCGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCgg                                                                                                                                                                                                                                             >  2:1424601/1‑142 (MQ=255)
                                                                                                                                                                       aaaCGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCgg                                                                                                                                                                                                                                             <  1:2403566/142‑1 (MQ=255)
                                                                                                                                                                        aaCGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATg                                                                                                                                                          <  1:2475481/224‑1 (MQ=255)
                                                                                                                                                                        aaCGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGt                                                                                         >  1:742550/1‑289 (MQ=255)
                                                                                                                                                                        aaCGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGt                                                                                         >  1:5645/1‑289 (MQ=255)
                                                                                                                                                                              tACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACg                                                                                                                                               >  2:612115/1‑229 (MQ=255)
                                                                                                                                                                                cATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTccc                                                                                 <  1:2449235/289‑1 (MQ=255)
                                                                                                                                                                                  tCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCa                                                                                                                                                 >  2:1763615/1‑223 (MQ=255)
                                                                                                                                                                                  tCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCa                                                                                                                                                 <  1:1763615/223‑1 (MQ=255)
                                                                                                                                                                                      ttAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTTTCCCAGTGACCTGTTTTTTCCCACAgg                                                                            >  2:1321742/1‑288 (MQ=255)
                                                                                                                                                                                        accTTCATTGCGAATTTTTTCGTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGaca                                                                         <  2:2582008/287‑1 (MQ=255)
                                                                                                                                                                                        aaCTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCCGGCCATGCAGCGAACCTGACGGCGCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGaca                                                                         <  2:2309014/289‑1 (MQ=255)
                                                                                                                                                                                        aaCTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGaca                                                                         <  1:708766/289‑1 (MQ=255)
                                                                                                                                                                                            tCATCGCGAATTTGTTCTTCAGTACAGCAGATATGCGCGTCATCCTGGGTAAATCCACGCACCCGTATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTAGCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACTGTTCTCAGAAGATGTGGTTAACATTGCATCTTTGTAGTTGTCCCAGTGCCCGGTTTTTTCCCACAGGACACGGt                                                                     <  1:1152673/289‑1 (MQ=255)
                                                                                                                                                                                              aTCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGTTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTTTCCCAGTGACCGGTTTTTTCCCACAGGCCACGGTcc                                                                   >  1:1000283/1‑289 (MQ=255)
                                                                                                                                                                                                cgcgAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGGGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCca                                                                  >  1:2022882/1‑288 (MQ=255)
                                                                                                                                                                                                       taatgaacaaGTCCAGAAGATATGCTCGTCATCATGCGTAACACCACGCACGCGCGTCTGGCCATGCAGCGAACCAGACGGCTCGTTACGGTGGCATCTACCAAACTCGGCCGTACGCAGCGGCAGATCGCGGTAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTAGTCACGGTTCTCATAATATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAAc                                                          <  2:1850860/280‑1 (MQ=255)
                                                                                                                                                                                                                   aCAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTaa                                                <  2:727924/287‑1 (MQ=255)
                                                                                                                                                                                                                       aagaTATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTAc                                                                                                                                                                                      <  1:787694/149‑1 (MQ=255)
                                                                                                                                                                                                                       aagaTATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTg                                                                                                                     <  2:446804/214‑1 (MQ=255)
                                                                                                                                                                                                                       aagaTATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACtt                                             >  1:2258018/1‑286 (MQ=255)
                                                                                                                                                                                                                         gaTATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCagaag                                                                                                                                    >  2:2084597/1‑197 (MQ=255)
                                                                                                                                                                                                                         gaTATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGa                                        >  2:377991/1‑289 (MQ=255)
                                                                                                                                                                                                                           tatcggctgcaaccTGGGTAAATCCACGAACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGATa                                      <  2:2555165/277‑1 (MQ=255)
                                                                                                                                                                                                                           tatGCCCGGCATCCTGGGTACATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGa                                        <  2:2629179/287‑1 (MQ=255)
                                                                                                                                                                                                                            atGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGCAGATGTGGTTAACATTGCATCTTTGTAGTTGTCCCAGTGACCGG‑TTTTTCCCACAGGACACGGTCCTTCCTGAACGGACCTTTAACTTCCTTATACt                                    >  2:1539850/1‑289 (MQ=255)
                                                                                                                                                                                                                            atGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAATGGACCTTTAACTTCCTGAt                                       >  1:619927/1‑287 (MQ=255)
                                                                                                                                                                                                                            atGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGAt                                       >  2:2190504/1‑287 (MQ=255)
                                                                                                                                                                                                                              gcgcGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCt                                                                                                                                                               <  2:1249366/165‑1 (MQ=255)
                                                                                                                                                                                                                              gcgcGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCt                                                                                                                                                               >  1:1249366/1‑165 (MQ=255)
                                                                                                                                                                                                                              gcgcGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGATACTg                                   >  1:2171095/1‑289 (MQ=255)
                                                                                                                                                                                                                                 cgTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGc                                                                                                                                                         <  2:332638/168‑1 (MQ=255)
                                                                                                                                                                                                                                 cgTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGATACTGGt                                 >  2:792080/1‑288 (MQ=255)
                                                                                                                                                                                                                                 cgTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGATACTGGt                                 >  1:1115144/1‑288 (MQ=255)
                                                                                                                                                                                                                                 cgTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTGTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGATACTGGt                                 >  1:2750/1‑288 (MQ=255)
                                                                                                                                                                                                                                   tCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGATACTGGTAc                               >  1:2236149/1‑288 (MQ=255)
                                                                                                                                                                                                                                       ccTGGGTAAATCCCGGCCCGCGCACCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCAAGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGATACTGGTACTCttt                          <  2:871159/289‑1 (MQ=255)
                                                                                                                                                                                                                                       ccTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGATACTGGTACTCttt                          <  1:1190838/289‑1 (MQ=255)
                                                                                                                                                                                                                                               aaTCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGATACTGGTACTCTTTCAGTTTAg                  <  2:1975999/289‑1 (MQ=255)
                                                                                                                                                                                                                                                aTCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGAc                                                                                                                                                                                 <  2:2384061/129‑1 (MQ=255)
                                                                                                                                                                                                                                                aTCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGaca                                                                         <  1:1871002/233‑1 (MQ=255)
                                                                                                                                                                                                                                                aTCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTaa                                                <  2:1138420/258‑1 (MQ=255)
                                                                                                                                                                                                                                                     cgcacgcGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACCTTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTTATACTGGTACTCTTTCAGTTTAaaacgaa            >  2:48604/1‑289 (MQ=255)
                                                                                                                                                                                                                                                     cgcacgcGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCt                                                                                                                <  1:413200/189‑1 (MQ=255)
                                                                                                                                                                                                                                                     cgcacgcGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCt                                                                                                                >  2:413200/1‑189 (MQ=255)
                                                                                                                                                                                                                                                     cgcacgcGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGATACTGGTACTCTTTCAGTTTAgaacga             >  1:1019708/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                            |||                                                                                                                                                                                                                                                                                 
CTTCACCCAGTTGATATTCAAACGGGATGTTGTTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGTGGAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGGCTACCACTCGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGATACTGGTACTCTTTCAGTTTAGAACGAACAAACACTTC  >  CP042583/1483147‑1483690

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A