Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,492,345 3 bp→TCA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,492,3450AT99.5% 905.2 / NA 385intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (1/1);  new base T (219/162);  total (221/164)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,492,3460GC99.5% 912.2 / NA 385intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (218/164);  minor base A (2/0);  total (221/164)
Fisher's exact test for biased strand distribution p-value = 5.09e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,492,3470TA99.5% 919.5 / NA 385intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (1/0);  major base A (219/163);  minor base C (1/1);  total (221/164)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 385 total aligned reads displayed.

AATTTAAGAGAAAGAGTTACACCGTCACCACTTCCGTGCACTGTATAAAAATCCTATACTGTACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGAGCTTTCTTGGGCAGCGATTAAAATGGATAAGTAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTGGCCATGCCGCTGGCGTTTCCGCTTGCCTATCCTGGTTCCCCAAAAGGGCAACCAACTGGAACGTTTTATCTGCATGG  >  CP042583/1492072‑1492621
                                                                                                                                                                                                                                                                                  |||                                                                                                                                                                                                                                                                                  
   ttAAGAGAAAGAGTTACACCGTCACCACTTCCGTGCACTGTATAAAAATCCTATACTGTACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCcgcg                                                                                                                                                                                                                                                                    <  2:2543003/289‑1 (MQ=255)
            agagTTACACCGTCACCACTTCCGTGCACTGTATAAAAATCCTATACTGTACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTggg                                                                                                                                                                                                                                                            >  2:40277/1‑288 (MQ=255)
                  acacCGTCACCACTTCCGTGCACTGTATAAAAATCCTATACTGTACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTg                                                                                                                                                                                                                                                     <  1:40277/289‑1 (MQ=255)
                      cGTCACCACTTCCGTGCACTGTATAAAAATCCTATACTGTACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGttt                                                                                                                                                                                                                                                 <  2:2295486/289‑1 (MQ=255)
                        tCACCACTTCCGTGCACTGTATAAAAATCCTATACTGTACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCGTGTGGGCATCGTGGtttt                                                                                                                                                                                                                                                >  1:1609670/1‑288 (MQ=255)
                        tCACCACTTCCGTGCACTGTATAAAAATCCTATACTGTACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATAGATCACCCAAAGTCGTTTCTTGGGCAGCGATTACAATGGATATCAAAACCGAATGCCCGCGTCTTTGGGCATCCTGGtttt                                                                                                                                                                                                                                                >  1:2242502/1‑288 (MQ=255)
                                tCCGTGCACTGTATAAAAATCCTATACTGTACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCg                                                                                                                                                                                                                                                       <  2:2196026/273‑1 (MQ=255)
                                 ccGTGCACTGTATGAAAATCCGAACATGTACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCcac                                                                                                                                                                                                                                          <  2:1476637/285‑1 (MQ=255)
                                 ccGTGCACTGTATAAAAATCCTATACTGTACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGt                                                                                                                                                                                                                                       <  1:2051192/288‑1 (MQ=255)
                                        cTGTATAAAAATCCTATACTGTACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGc                                                                                                                                                                                                                               <  1:2357342/289‑1 (MQ=255)
                                         tGTATAAAAATCCTATACTGTACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCg                                                                                                                                                                                                                              >  2:1856165/1‑289 (MQ=255)
                                         tGTATAAAAATCCTATACTGTACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCAATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTAcc                                                                                                                                                                                                                                             >  1:1982025/1‑274 (MQ=255)
                                         tGTATAAAAATCCTATACTGTACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCAATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTAcc                                                                                                                                                                                                                                             <  2:1982025/274‑1 (MQ=255)
                                          gTATAAAAATCCTATACTGTACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCgg                                                                                                                                                                                                                             >  2:670961/1‑289 (MQ=255)
                                           tataAAAATCCTATACTGTACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCCATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCTATTAAAATGGATATCAACACCGATCGCCCGCTGCTTTGGGCATCGTTGTTTTACCCACAGTCCTCTGGCGGt                                                                                                                                                                                                                            >  2:2263545/1‑289 (MQ=255)
                                           tataAAAATCCTATACTGTACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCcgcg                                                                                                                                                                                                                                                                    >  1:1318556/1‑249 (MQ=255)
                                           tataAAAATCCTATACTGTACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTg                                                                                                                                                                                                                                                     <  1:884388/264‑1 (MQ=255)
                                           tataAAAATCCTATACTGTACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGttt                                                                                                                                                                                                                                                 <  1:1338603/268‑1 (MQ=255)
                                           tataAAAATCCTATACTGTACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTgg                                                                                                                                                                                                                                >  1:1476637/1‑285 (MQ=255)
                                           tataAAAATCCTATACTGTACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGt                                                                                                                                                                                                                            >  2:23949/1‑289 (MQ=255)
                                           tataAAAATCCTATACTGTACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGt                                                                                                                                                                                                                            >  1:2499126/1‑289 (MQ=255)
                                           tataAAAATCCTATACTGTACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGt                                                                                                                                                                                                                            >  2:2658880/1‑289 (MQ=255)
                                           tataAAAATCCTATACTGTACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTACTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCcg                                                                                                                                                                                                                                                                      >  2:53469/1‑247 (MQ=255)
                                                  aTCCTTTACTGTACTGTTCGAAAGTTTATTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGGGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTgcg                                                                                                                                                                                                                     <  2:1036105/289‑1 (MQ=255)
                                                   tCCTATACTGTACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTgc                                                                                                                                                                                                                      >  1:2569837/1‑287 (MQ=255)
                                                   tCCTATACTGTACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTgc                                                                                                                                                                                                                      >  1:2118285/1‑287 (MQ=255)
                                                     cTATACTGTACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCgct                                                                                                                                                                                                                   >  1:1879934/1‑288 (MQ=255)
                                                             tACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCACTCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGTCATCGTGGTTTTACCCACAGTCTTCTGGCCGTATTTGCTCCGCTGGCaa                                                                                                                                                                                                           >  2:1799373/1‑288 (MQ=255)
                                                             tACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTTGGCATCGTGGTTTTACCCACCGTCTGCTGGCGGTATTTGCGCTGCTGGCaa                                                                                                                                                                                                           >  1:191929/1‑288 (MQ=255)
                                                             tACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCcac                                                                                                                                                                                                                                          >  2:795178/1‑257 (MQ=255)
                                                             tACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCca                                                                                                                                                                                                                                           <  1:829036/256‑1 (MQ=255)
                                                             tACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAg                                                                                                                                                                                                                                        <  2:2614835/259‑1 (MQ=255)
                                                             tACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTctgct                                                                                                                                                                                                                                  <  1:2540589/265‑1 (MQ=255)
                                                             tACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCaa                                                                                                                                                                                                           >  2:1735864/1‑288 (MQ=255)
                                                             tACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGGGGTTTTACCCACAGTTCGCTGGCGGTATTTGCGCTGGTTGCaa                                                                                                                                                                                                           >  2:886797/1‑288 (MQ=255)
                                                                  aTCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCcg                                                                                                                                                                                                                                                                      >  1:557282/1‑224 (MQ=255)
                                                                  aTCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCtttt                                                                                                                                                                                                     >  2:1448395/1‑289 (MQ=255)
                                                                  aTCGACAGCTTAGTGAGTTTTATCATGACGGCGCAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGCTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATTACCCAAAGCTGTTTCTTGGCCAGCGATGCAAATGGATATCAAAACCTATCTCCCGCGCTTTTTGGCATCGTGTTTCTACCCAAATTCTGCCTGTGGTCTTTGAGCTTCTGTCAACCtttc                                                                                                                                                                                                     >  2:567085/1‑288 (MQ=255)
                                                                    cGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTa                                                                                                                                                                                                    >  1:360747/1‑288 (MQ=255)
                                                                       cAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCtt                                                                                                                                                                                                >  2:1149845/1‑289 (MQ=255)
                                                                       cAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCtt                                                                                                                                                                                                >  1:571372/1‑289 (MQ=255)
                                                                            tAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGt                                                                                                                                                                                           >  2:737555/1‑289 (MQ=255)
                                                                                  gTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGa                                                                                                                                                                                     >  2:1321863/1‑289 (MQ=255)
                                                                                    tttATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAg                                                                                                                                                                                   >  1:2423016/1‑289 (MQ=255)
                                                                                      tATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGc                                                                                                                                                                                 <  1:670961/289‑1 (MQ=255)
                                                                                                         cACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAACAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTGCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGAt                                                                                                                                                               <  1:2687933/288‑1 (MQ=255)
                                                                                                         cACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGAt                                                                                                                                                               >  1:1834559/1‑288 (MQ=255)
                                                                                                                tctTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACa                                                                                                                                                       <  2:1915362/289‑1 (MQ=255)
                                                                                                                  ttttCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAg                                                                                                                                                     >  1:1190364/1‑289 (MQ=255)
                                                                                                                   tttCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGt                                                                                                                                                                             >  2:1162725/1‑264 (MQ=255)
                                                                                                                     tCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGaa                                                                                                                                                  <  2:859605/289‑1 (MQ=255)
                                                                                                                     tCTATGGCTTGTGCGGTCTTTGCCAAAAATGCCGAGCTGACGCCCGGGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGaa                                                                                                                                                  <  2:135513/289‑1 (MQ=255)
                                                                                                                         ttGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCa                                                                                                                                                                                                            >  2:1623947/1‑227 (MQ=255)
                                                                                                                         ttGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCAAAGGGTGAATGGGGGCATAATGTAGCTTCCGCAATCCTGACGTGTTTG‑TTACCGGCCATCGATCACCCAAGGTCGTTTATTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGCTATTTGCGCTGCTGGCAACCGTTTACCTTAAGGCTTCGGAAGGCGAGTTCATTCCCGAACATGAGTTACAAAGAATgag                                                                                                                                              >  2:1563216/1‑287 (MQ=255)
                                                                                                                            cTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGCTCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGaaatgt                                                                                                                                              >  2:1083645/1‑282 (MQ=255)
                                                                                                                            cTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCca                                                                                                                                                                                                                                           <  1:1045641/193‑1 (MQ=255)
                                                                                                                              tgtgCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCg                                                                                                                                                                                                                                                       <  2:1687506/179‑1 (MQ=255)
                                                                                                                              tgtgCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTctg                                                                                                                                                                                                                                    >  1:1011276/1‑198 (MQ=255)
                                                                                                                              tgtgCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGc                                                                                                                                            >  2:819795/1‑286 (MQ=255)
                                                                                                                              tgtgCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTgg                                                                                                                                         >  2:252272/1‑289 (MQ=255)
                                                                                                                                tgCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCGGGGt                                                                                                                                       >  2:320821/1‑289 (MQ=255)
                                                                                                                                       tttGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCg                                                                                                                                                                                                                                                       <  2:966587/170‑1 (MQ=255)
                                                                                                                                               aaaTGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATgcg                                                                                                                                                            <  1:2447735/253‑1 (MQ=255)
                                                                                                                                               aaaTGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTg                                                                                                                                             <  2:2602578/268‑1 (MQ=255)
                                                                                                                                                        gCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCTCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGa                                                                                                                <  2:698689/288‑1 (MQ=255)
                                                                                                                                                         cTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGat                                                                                                               <  2:2428385/288‑1 (MQ=255)
                                                                                                                                                                 cGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGaca                                                                                                      <  1:1668443/289‑1 (MQ=255)
                                                                                                                                                                   tGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATg                                                                                                            <  1:313842/281‑1 (MQ=255)
                                                                                                                                                                   tGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTCGCCGGTAGTCTGccac                                                                                                     >  2:384517/1‑288 (MQ=255)
                                                                                                                                                                         cacaGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACccgccg                                                                                               <  1:1705404/288‑1 (MQ=255)
                                                                                                                                                                              ggTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGaa                                                                                                                                                  >  2:291695/1‑232 (MQ=255)
                                                                                                                                                                              ggTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCg                                                                                                                 >  2:2030552/1‑265 (MQ=255)
                                                                                                                                                                              ggTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGtt                                                                                          >  1:1542478/1‑288 (MQ=255)
                                                                                                                                                                                  aCTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTcc                                                                                        >  1:241382/1‑286 (MQ=255)
                                                                                                                                                                                      gtggCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTggg                                                                                                                                        >  1:770104/1‑234 (MQ=255)
                                                                                                                                                                                             atTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTGGCCAt                                                                          >  1:1073151/1‑289 (MQ=255)
                                                                                                                                                                                                gTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTg                                                                                                                                             <  1:2338600/219‑1 (MQ=255)
                                                                                                                                                                                                 tCCCTTCCGCAATCCTGACGTGTTTT‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACAcc                                                                                                    <  2:488071/259‑1 (MQ=255)
                                                                                                                                                                                                 tCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACAcc                                                                                                    >  1:488071/1‑259 (MQ=255)
                                                                                                                                                                                                 tCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTGGCCATGcc                                                                       >  2:1252478/1‑288 (MQ=255)
                                                                                                                                                                                                      tCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTGGCCATGCCGCTGGc                                                                 >  1:2737453/1‑289 (MQ=255)
                                                                                                                                                                                                        cGCAATCCTGACGGGTTTG‑TTACCGGAACTCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTGGCCATGCCGCTGGCGt                                                               <  2:2467566/289‑1 (MQ=255)
                                                                                                                                                                                                           aaTCCTGACGTGTTTG‑TTGCCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTGGCCATGCCGCTGGCGttt                                                             >  2:1384273/1‑288 (MQ=255)
                                                                                                                                                                                                             cccTGCCGTGTTTT‑TTCCCGGACATCGATTACCCAAGGTCGTTTCTTGGTCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTGGCCATGCCGCTGGCGTTTCCg                                                          <  2:1236322/288‑1 (MQ=255)
                                                                                                                                                                                                              tccttcctgtttgttTACCGGACCTGGTGCACCCAAACTCGTTTCTTGGGCTGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTGGGGCACCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTGGCCATGCCGCTGGCGTTTCCg                                                          <  2:360747/282‑1 (MQ=255)
                                                                                                                                                                                                                 gACGTGTTTG‑TTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTTGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTGGCCATGCCGCTGGCGTTTCCGCTTg                                                      <  1:712161/289‑1 (MQ=255)
                                                                                                                                                                                                                       tttg‑ttACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTGGCCATGCCGCTGGCGTTTCCGCTTGCCTAt                                                 >  1:116208/1‑288 (MQ=255)
                                                                                                                                                                                                                         tg‑ttACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTGGCCATGCCGCTGGCGTTTCCGCTTGCCTATCCt                                              >  1:2612201/1‑289 (MQ=255)
                                                                                                                                                                                                                         tg‑ttACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTGGCCATGCCGCTGGCGTTTCCGCTTGCCTATCCt                                              <  1:1252478/289‑1 (MQ=255)
                                                                                                                                                                                                                                             cccAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTGGCCATGCCGCTGGCTTTTCCGCTTGCCTATCCTGGTTCCCCAAAAGGGcaa                            >  2:609281/1‑288 (MQ=255)
                                                                                                                                                                                                                                                aaagtcgtttCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTGGCCATGCCGCTGGCGTTTCCGCTTGCCTATCCTGGTTCCCCAAAAGGGcaacca                         >  1:946482/8‑288 (MQ=255)
                                                                                                                                                                                                                                                     cgtttCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTGGCCATGCCGCTGGCGTTTCCGCTTGCCTATCCTGGTTCCCCAAAAGGGCAACCAACTgg                    <  1:2225613/286‑1 (MQ=255)
                                                                                                                                                                                                                                                     cgtttCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTGGCCATGCCGCTGGCGTTTCCGCTTGCCTATCCTGGTTCCCCAAAAGGGCAACCAACTgg                    <  1:1364628/286‑1 (MQ=255)
                                                                                                                                                                                                                                                     cgtttCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTGGCCATGCCGCTGGCGTTTCCGCTTGCCTATCCTGGTTCCCCAAAAGGGCAACCAACTgg                    <  1:1384273/286‑1 (MQ=255)
                                                                                                                                                                                                                                                        ttCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTGGCCATGCCGCTGGCGTTTCCGCTTGCCTATCCTGGTTCCCCAAAAGGGCAACCAACTGGAACg                >  1:2714695/1‑289 (MQ=255)
                                                                                                                                                                                                                                                             gggCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTg                                                                                                                                             >  2:1539765/1‑159 (MQ=255)
                                                                                                                                                                                                                                                                    gATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTGGCCATGCCGCTGGCGTTTCCGCTTGCCTATCCTGGTTCCCCAAAAGGGCAACCAACTGGAACGTTTTATCTGc      <  1:1799373/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                    gATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTGGCCATGCCGCTGGCGTTTCCGCTTGCCTATCCTGGTTCCCCAAAAGGGCAACCAACTGGAACGTTTTATCTGCa     <  1:602378/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                    gATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTGGCCATGCCGCTGGCGTTTCCGCTTGCCTATCCTGGTTCCCCAAAAGGGCAACCAACTGGAACGTTTTATCTGCAt    <  1:813029/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                      ttAAAATGGCTATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTGGCCATGCCGCTGGCGTTTCCGCTTGCCTATCCTGGTTCCCCAAAAGGGCAACCAACTGGAACGTTTTATCTGCATgg  <  1:993182/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                  |||                                                                                                                                                                                                                                                                                  
AATTTAAGAGAAAGAGTTACACCGTCACCACTTCCGTGCACTGTATAAAAATCCTATACTGTACGTATCGACAGTTTAGTGAGTTTTATCATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTG‑TTACCGGACATCGATCACCCAAAGAGCTTTCTTGGGCAGCGATTAAAATGGATAAGTAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTGGCCATGCCGCTGGCGTTTCCGCTTGCCTATCCTGGTTCCCCAAAAGGGCAACCAACTGGAACGTTTTATCTGCATGG  >  CP042583/1492072‑1492621

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A