Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,646,891 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,646,8910AT99.3% 699.0 / NA 294intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (147/145);  minor base G (1/1);  total (148/146)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,646,8920CG99.7% 695.0 / ‑4.5 294intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (148/145);  minor base A (0/1);  total (148/146)
Fisher's exact test for biased strand distribution p-value = 4.97e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.28e-01
*CP0425831,646,8930TA99.3% 695.1 / NA 294intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (147/145);  minor base G (1/1);  total (148/146)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 294 total aligned reads displayed.

GCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATAACTGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATGCTCGTCATTGGCTGCCCACTGGTCATACGACTAGCCAGAATAATTCCGGCTATCGCACTTACCAGGCCACTGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCTTCGATACCGACCGCTTTACCGTCACTAATGATGTACGCCAGACCTCGAACAATCTGCATCGTTGCCAAT  >  CP042583/1646611‑1647170
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                     
gCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAAc                                                                                                                                                                                                                                                                                 <  2:2613264/289‑1 (MQ=255)
  ttGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACaa                                                                                                                                                                                                                                                                               <  2:1874773/289‑1 (MQ=255)
  ttGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACa                                                                                                                                                                                                                                                                                <  1:1087248/288‑1 (MQ=255)
     tAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGa                                                                                                                                                                                                                                                                            >  1:1065215/1‑289 (MQ=255)
           tCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGAtaataa                                                                                                                                                                                                                                                                      >  2:150441/1‑289 (MQ=255)
                      cGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGa                                                                                                                                                                                                                                                           <  1:2302712/289‑1 (MQ=255)
                         tgacagcagGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTAATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACAACATATGAGATTTTACCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGaaca                                                                                                                                                                                                                                                        <  2:326454/286‑1 (MQ=255)
                         tGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACACAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGaaca                                                                                                                                                                                                                                                        >  1:2457024/1‑289 (MQ=255)
                                   aTTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTaca                                                                                                                                                                                                                                               <  2:633040/288‑1 (MQ=255)
                                   aTTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTa                                                                                                                                                                                                                                                 <  1:1310432/286‑1 (MQ=255)
                                   aTTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTa                                                                                                                                                                                                                                                 <  1:150441/286‑1 (MQ=255)
                                   aTTAAGCCGAGAACCACGTACTGCGAGAAAGGAGAAATAATAAGCAGGTTCAGGGCGTTTTCCAAGGGTCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTaca                                                                                                                                                                                                                                               <  2:2161547/288‑1 (MQ=255)
                                       aGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGCTAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCg                                                                                                                                                                                                                                           >  1:2674940/1‑288 (MQ=255)
                                            cgAACCACGTACTGCGCGAAAGGAGATATATTAAGCAGGGTCATGGCTTTTTCCACGGTGCCTAAAATTAATATACCCGCCACCACATATGAGATTTTTCAGATGCCACCTTTCAGAGAAACGCCGCCTAACACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGGCATTGGCTGCCCACTGGTCATACGTGCAGCCAGAATAATTCCGGCTAACGCTGCTACCAGCACTGAGAGCACCAAAATAATAATCTTGGTCCGTACAACCAGTACACCCGCCAgc                                                                                                                                                                                                                                      >  2:1576076/1‑287 (MQ=255)
                                               cccaggtacacggcgAAAGGAGAAATATTAAGCAGGTTCAGGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAGCGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGAcgcg                                                                                                                                                                                                                                  <  2:301091/277‑1 (MQ=255)
                                                          cgcgAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTa                                                                                                                                                                                                                                                 <  1:365131/263‑1 (MQ=255)
                                                           gcgTAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATGGGCTGCCCATTGCTCATACGTGAAGCCAGAATAATTCCGGTCATCGCTGATACCGGGCCGGAGCGGACAAAGTTAATAATTTTTGTTCGAACAATCGGTACACCCGCCAGATCCGCGGCCTCTTCga                                                                                                                                                                                                                      >  2:130008/1‑288 (MQ=255)
                                                                    gaAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCgg                                                                                                                                                                                                                                                   >  2:77213/1‑251 (MQ=255)
                                                                    gaAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTaca                                                                                                                                                                                                                                               <  1:290964/255‑1 (MQ=255)
                                                                    gaAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCa                                                                                                                                                                                                              <  2:2269850/288‑1 (MQ=255)
                                                                    gaAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCa                                                                                                                                                                                                              <  2:1065215/288‑1 (MQ=255)
                                                                           tAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAg                                                                                                                                                                                                      <  1:928218/289‑1 (MQ=255)
                                                                           tAAGCACGTTCATGGCGTTTTCCACGAGGCCTAAAATTAGGATACCCGCCCCCACATATGAGATTATTCCGATACCACCTTTCAAAAAAACGCCAACTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAGTCGTCGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCTGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAg                                                                                                                                                                                                      <  2:2427974/289‑1 (MQ=255)
                                                                            aaGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAgg                                                                                                                                                                                                     <  2:2563692/289‑1 (MQ=255)
                                                                            aaGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAgg                                                                                                                                                                                                     <  2:868607/289‑1 (MQ=255)
                                                                            aaGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCCACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGaac                                                                                                                                                                                                                                                         <  1:610663/237‑1 (MQ=255)
                                                                            aaGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCACCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAgg                                                                                                                                                                                                     <  2:1126501/289‑1 (MQ=255)
                                                                                  gTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGtt                                                                                                                                                                                                >  1:1989692/1‑288 (MQ=255)
                                                                                   ttCATGGCGGTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGtt                                                                                                                                                                                                <  2:2738848/287‑1 (MQ=255)
                                                                                            ttttCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAgg                                                                                                                                                                                     >  1:743820/1‑289 (MQ=255)
                                                                                            ttttCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGGTCCCGCCAATCGCCAGGGGGTTCATACCAAAgg                                                                                                                                                                                     >  2:27019/1‑289 (MQ=255)
                                                                                             tttCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggt                                                                                                                                                                                    >  2:495859/1‑289 (MQ=255)
                                                                                               tCCACGGTGCCTAAAATTAAGATACCCGCAACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACACAGATAATAATTTTGGTGCGAACAACCGGTCCACCCGCCAGACGCCAGGCCTCTTCGTTCCCGCCAATCGCCAGGCTCTTACGAACAAAggtgg                                                                                                                                                                                  >  1:1036343/1‑289 (MQ=255)
                                                                                                 cACTGTGCCTAAAATTAAGACCCCCGCCACCAAATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTTCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGtt                                                                                                                                                                                <  1:1186928/289‑1 (MQ=255)
                                                                                                      tGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTAt                                                                                                                                                                            >  2:519755/1‑288 (MQ=255)
                                                                                                      tGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATA‑CAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAg                                                                                                                                                                                                      >  2:552974/1‑261 (MQ=255)
                                                                                                                  aGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAAt                                                                                                                                                                                                            >  1:2162987/1‑244 (MQ=255)
                                                                                                                      aCCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAg                                                                                                                                                           <  2:1989692/289‑1 (MQ=255)
                                                                                                                         cGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGCAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACa                                                                                                                                                                                                                                                                                >  1:554926/1‑169 (MQ=255)
                                                                                                                                      gagATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGc                                                                                                                                                                                                         >  2:1020488/3‑227 (MQ=255)
                                                                                                                                      gagATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGc                                                                                                                                                                                                         <  1:1020488/225‑1 (MQ=255)
                                                                                                                                         aTTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTTCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTTGTGCGAACAACCGGTACACCCGCCAGACGCCCGCCCTCTTCGTTCCCGCCAATCGCCAGGGTGTGAAGACCAAAGTTGGGTTTATTCAACCGCAAACAAACGATAACCAGAAACACAACgg                                                                                                                                        >  2:1252173/1‑289 (MQ=255)
                                                                                                                                         aTTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGaac                                                                                                                                                                                                                                                         >  1:2537356/1‑176 (MQ=255)
                                                                                                                                         aTTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTGACGACCAACGGTGGTTTTACTCAGCAGCAAACCAAAGATAATCAAACACGCGCCgg                                                                                                                                        >  2:2717301/1‑289 (MQ=255)
                                                                                                                                             ttCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTcc                                                                                                                                                                                                                   >  2:2493528/1‑210 (MQ=255)
                                                                                                                                                      caccgtgaagagAAAACCCACCTAAAACACAGGCGGAGATAACACTCAGCCACTAAC‑CATTCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTgg                                                                                                                           <  2:2457024/281‑1 (MQ=255)
                                                                                                                                                            tCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCgcagg                                                                                                                     <  1:1008827/289‑1 (MQ=255)
                                                                                                                                                                   aaCGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTgg                                                                                                                           <  2:666607/276‑1 (MQ=255)
                                                                                                                                                                   aaCGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCg                                                                                                              >  2:1003187/1‑289 (MQ=255)
                                                                                                                                                                     cGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCaa                                                                                                                                                                                                             >  1:2086502/1‑192 (MQ=255)
                                                                                                                                                                         aCCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAg                                                                                                        <  1:1210839/289‑1 (MQ=255)
                                                                                                                                                                         aCCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCAGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAg                                                                                                        <  2:716074/289‑1 (MQ=255)
                                                                                                                                                                          ccTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTcagcag                                                                                                                                                                     <  1:533987/227‑1 (MQ=255)
                                                                                                                                                                               aaCGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCg                                                                                                  <  2:1854752/289‑1 (MQ=255)
                                                                                                                                                                               aaCGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCg                                                                                                  <  1:2601695/289‑1 (MQ=255)
                                                                                                                                                                               aaCGCAGGACGAGATAAACATACGGACAGAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGGCTGGGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCg                                                                                                  <  2:2393502/289‑1 (MQ=255)
                                                                                                                                                                                   cAGGCGGGAATAACAATCACCTCAAAACACAGCGC‑AGTCATTGGCTGACCACTGGTCATACGAGAAGCAAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCATGCAGACCGAACCAGTTGGCg                                                                                                  <  2:1202965/285‑1 (MQ=255)
                                                                                                                                                                                    aGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCATGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAAcc                                                                                             >  1:1756960/1‑289 (MQ=255)
                                                                                                                                                                                     ggCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAgg                                                                                                                                                                                     <  1:671228/200‑1 (MQ=255)
                                                                                                                                                                                              aacaacCAGCTCATAAC‑CAATCGCCGTCATTGGCTGCCCACGGGTCATACGTGAAGCAAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAaag                                                                                   <  2:1346451/289‑1 (MQ=255)
                                                                                                                                                                                                cAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAaagaa                                                                                 >  2:1619169/1‑289 (MQ=255)
                                                                                                                                                                                                     aGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCtt                                                                             >  2:1682160/1‑288 (MQ=255)
                                                                                                                                                                                                      gCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCaa                                                                                                                                                                                                             <  2:2037221/159‑1 (MQ=255)
                                                                                                                                                                                                        tCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTc                                                                           <  1:1124884/287‑1 (MQ=255)
                                                                                                                                                                                                        tCATAAC‑AAATCGACTTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTc                                                                           <  2:175946/287‑1 (MQ=255)
                                                                                                                                                                                                                  atcgacGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCGCTTCGTTCTCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCTTCGATa                                                                 >  1:820739/6‑288 (MQ=255)
                                                                                                                                                                                                                     gacGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGCTTTATTCAGCAGCAAACCCAAGATAACCAGACACCCGACGGTGAGCCCGATTGCCCCAGGCACAACGCACCAGTGTGCCGACCCAAGGGGTAAGAAGATTTCAACtcacgcaccc                                                              >  2:1186536/3‑279 (MQ=255)
                                                                                                                                                                                                                          cATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGAATGGCGCAGGCAGACCGAACCAGTTGGCGGAACCCAGGGCAAAGAAGCTTTCATCTTCGAGACCGACCGCt                                                        >  2:2196688/1‑289 (MQ=255)
                                                                                                                                                                                                                            ttGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCTTCGATACCGACCGCttt                                                      <  1:1438043/289‑1 (MQ=255)
                                                                                                                                                                                                                                 tGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCTTCGATACCGACCGCTTTACCg                                                  >  1:2495018/1‑288 (MQ=255)
                                                                                                                                                                                                                                 tGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCTTCGATACCGACCGCTTTACCGt                                                 <  1:1619169/289‑1 (MQ=255)
                                                                                                                                                                                                                                   cccACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTcagcag                                                                                                                                                                     >  2:1734883/1‑171 (MQ=255)
                                                                                                                                                                                                                                   cccACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTcagcag                                                                                                                                                                     <  1:1734883/171‑1 (MQ=255)
                                                                                                                                                                                                                                       cTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGAAACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCTTCGATACCGACCGCTTTACCGTctgaaa                                           <  2:2674940/289‑6 (MQ=255)
                                                                                                                                                                                                                                             atacgtgaaGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCTTCGATACCGACCGCTTTAcc                                                   >  2:1830315/9‑275 (MQ=255)
                                                                                                                                                                                                                                             atacgtgaaGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCTTCGATACCGACCGCTTTAcc                                                   <  1:1830315/267‑1 (MQ=255)
                                                                                                                                                                                                                                             atacgtgaaGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCTTCGATACCGACCGCTTTACCGTCTGAAATGATGt                                     >  1:2041324/9‑289 (MQ=255)
                                                                                                                                                                                                                                               acgtgaaGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCTTCGATACCGACCGCTTTACCGTCTGAAATGATGTAc                                   >  1:1807330/7‑289 (MQ=255)
                                                                                                                                                                                                                                                  tgaaGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCTTCGATACCGACCGCTTTACCGTCTGAAATGATGTACGcc                                >  1:1378050/4‑289 (MQ=255)
                                                                                                                                                                                                                                                   gaaGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCTTCGATACCGACCGCTTTACCGTCTGAAATGATGTACGcc                                <  1:1682160/286‑1 (MQ=255)
                                                                                                                                                                                                                                                    aaGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTc                                                                           <  2:405016/243‑1 (MQ=255)
                                                                                                                                                                                                                                                    aaGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTc                                                                           >  1:405016/2‑244 (MQ=255)
                                                                                                                                                                                                                                                    aaGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCTTCGATACCGACCGCTTTACCGTCTGAAATGATGTACGCCAg                              >  1:232694/2‑289 (MQ=255)
                                                                                                                                                                                                                                                    aaGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCTTCGATACCGACCGCTTTACCGTCTGAAATGATGTACGCCAg                              >  2:565296/2‑289 (MQ=255)
                                                                                                                                                                                                                                                    aaGCAAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAACGAAGCTTTCATCTTCGATACCGACCGCTTTACCGTCTGAAATGATGTACGCCAg                              >  1:2019358/2‑289 (MQ=255)
                                                                                                                                                                                                                                                     aGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTa                                                                                                                                                                                               >  1:792266/1‑127 (MQ=255)
                                                                                                                                                                                                                                                     aGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGc                                                                                                   >  1:1917553/1‑219 (MQ=255)
                                                                                                                                                                                                                                                     aGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGc                                                                                                   <  2:1917553/219‑1 (MQ=255)
                                                                                                                                                                                                                                                        cAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCTTCGATACCGACCGCTTTACCGTCTGAAATGATGTACGCCAGAcc                           >  1:2643046/1‑288 (MQ=255)
                                                                                                                                                                                                                                                         aGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTc                                                                           >  1:315599/1‑239 (MQ=255)
                                                                                                                                                                                                                                                           aataatTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCTTCGATACCGACCGCTTTa                                                     >  2:2068751/1‑259 (MQ=255)
                                                                                                                                                                                                                                                                ttCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCTTCGATACCGACCGCTTTACCGTCTGAAATGATGTACGCCAGACCTCGAACaa                   >  1:2208626/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                ttCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCTTCGATACCGACCGCTTTACCGTCTGAAATGATGTACGCCAGACCTCGAACAAt                  <  1:2405427/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     gCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCTTCGATACCAACCGCTTCACCGTCTGAAATGATGTACCGCAGACCTCGAATAACCCGCa             >  2:937040/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                         tcgctgatACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCTTCGATACCGACCGCTTTACCGTCTGAAATGATGTACGCCAGACCTCGAACAATCTGCATCGt         >  1:1560083/8‑289 (MQ=255)
                                                                                                                                                                                                                                                                         tcgctgatACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCTTCGATACCGACCGCTTTACCGTCTGAAATGATGTACGCCAGACCTCGAACAATCTGCATCGt         <  1:2707285/282‑1 (MQ=255)
                                                                                                                                                                                                                                                                          cgctgatACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCTTCGATACCGACCGCTTTACCGTCTGAAATGATGTACGCCAGACCCACAACCATCGTCATCGtt        >  2:109942/7‑289 (MQ=255)
                                                                                                                                                                                                                                                                              gatACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCTTCGATACCGACCGCTTTACCGTCTGAAATGATGTACGCCAGACCTCGAACAATCTGCATCGTTGCCa    <  1:2247830/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                              gatACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCTTCGATACCGACCGCTTTACCGTCTGAAATGATGTACGCCAGACCTCGAACAATCTGCATCGTTGCCa    <  2:793442/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                                tACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCTTCGATACCGACCGCTTTACCGTCTGAAATGATGTACGCCAGACCTCGAACAATCTGCATCGTTGCCAAt  <  1:495859/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                     
GCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATAACTGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATGCTCGTCATTGGCTGCCCACTGGTCATACGACTAGCCAGAATAATTCCGGCTATCGCACTTACCAGGCCACTGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCTTCGATACCGACCGCTTTACCGTCACTAATGATGTACGCCAGACCTCGAACAATCTGCATCGTTGCCAAT  >  CP042583/1646611‑1647170

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A