Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,663,919 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,663,9190GC100.0% 597.0 / NA 254intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (134/120);  total (134/120)
*CP0425831,663,9200CG99.2% 584.3 / NA 254intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/1);  new base G (133/117);  total (134/120)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,663,9210TA98.8% 583.4 / NA 254intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (132/118);  minor base G (1/2);  total (134/120)
Fisher's exact test for biased strand distribution p-value = 6.05e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 254 total aligned reads displayed.

TGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGACTCTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGGCTGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAG  >  CP042583/1663642‑1664199
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                      
tGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGAt                                                                                                                                                                                                                                                                               <  1:351391/289‑1 (MQ=255)
tGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGAt                                                                                                                                                                                                                                                                               <  1:785589/289‑1 (MQ=255)
    ggTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGt                                                                                                                                                                                                                                                                           >  1:157678/1‑289 (MQ=255)
    ggTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCCAGATAAAGCCGACGGTCGGCCAGTGCCTGGAGTTGTTCAAAATCATAAACCCCGGTTTCCTCCCTGCCGCTTACCCCCCGCGAGGCCCTGATGCg                                                                                                                                                                                                                                                                            >  2:2689424/1‑288 (MQ=255)
      tAATGGATTAGGCGGGGATTGTGAAAGGGCTAAATCGGGAAGGGGTGCATCTGCATGATGAGGCTCCGGCCCGCGGCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTa                                                                                                                                                                                                                                                                          <  2:1793757/288‑1 (MQ=255)
        aTGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTAtc                                                                                                                                                                                                                                                                        >  2:663039/1‑288 (MQ=255)
            ggtgcgcgGTGATTGGGAAACGGCTAACTGGTGAAGGGGTGGAGCTGAATGATGAGGTGCAGGCCCGCGGCTGGCGAACGCAGCGTGAAGGACCGGAGGGATGGGGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGAGTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTAtcgtcg                                                                                                                                                                                                                                                                    <  2:2402883/284‑1 (MQ=255)
            aTTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTACGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACTCCCATCGAGGCACTGCTGCGTATcgtcgt                                                                                                                                                                                                                                                                   >  1:707188/1‑289 (MQ=255)
            aTTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTAtcgtcg                                                                                                                                                                                                                                                                    <  2:783926/288‑1 (MQ=255)
              tACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTAc                                                                                                                                                                                                                                                                 <  1:2086922/289‑1 (MQ=255)
                cgcgGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTAc                                                                                                                                                                                                                                                                 >  1:587494/1‑287 (MQ=255)
                cgcgGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTAc                                                                                                                                                                                                                                                                 >  1:1624079/1‑287 (MQ=255)
                cgcgGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTAc                                                                                                                                                                                                                                                                 >  1:1852961/1‑287 (MQ=255)
                 gcgGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTActct                                                                                                                                                                                                                                                              <  1:2579305/289‑1 (MQ=255)
                     tGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGCGGCACTGATGCGTATCGTCGTACTCTTGGc                                                                                                                                                                                                                                                          >  1:2272176/1‑289 (MQ=255)
                     tGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGc                                                                                                                                                                                                                                                          >  1:370963/1‑289 (MQ=255)
                     tGATTGAGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGc                                                                                                                                                                                                                                                          >  1:2367714/1‑289 (MQ=255)
                       aTTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCg                                                                                                                                                                                                                                                         <  2:315359/288‑1 (MQ=255)
                            gAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCaa                                                                                                                                                                                                                                                    <  2:157678/288‑1 (MQ=255)
                               aGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGTCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCTCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACAt                                                                                                                                                                                                                                                 >  1:1950819/1‑288 (MQ=255)
                                 ggCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGACGCTGCTTACCCCCAGCGACGCACCGCAGGGTATCGTCGAAATCTTGGCGATCAACAtcc                                                                                                                                                                                                                                               >  1:428145/1‑287 (MQ=255)
                                     aaaTCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCtttt                                                                                                                                                                                                                                          <  2:587494/289‑1 (MQ=255)
                                           tGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTTGCGATCAACATCTCTTTTTCAttt                                                                                                                                                                                                                                    >  1:1998416/1‑289 (MQ=255)
                                                    gCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAg                                                                                                                                                                                                                            <  1:91091/288‑1 (MQ=255)
                                                    gCATCTGCATGAGGAGGATCCGGCCCGCGACTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGt                                                                                                                                                                                                                           <  1:2130193/289‑1 (MQ=255)
                                                     cATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTc                                                                                                                                                                                                                          >  1:1236909/1‑289 (MQ=255)
                                                          gaaggaggaGGATCCGGCCCGCGTCTGGCGACAGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAAt                                                                                                                                                                                                                      <  2:1582707/281‑1 (MQ=255)
                                                          gCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGGGACTGGAGTTGTTCAACATGATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTATTGGCGTGCACCATCTCTTTTGCATTTAATGTCATTCGatt                                                                                                                                                                                                                      >  2:1079147/1‑286 (MQ=255)
                                                             tgatgaGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAAt                                                                                                                                                                                                                      <  2:445348/285‑1 (MQ=255)
                                                                tgaGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCACCACCTCTTTTTCATTTAATTTCAGTCGAATACGt                                                                                                                                                                                                                  >  1:881867/1‑286 (MQ=255)
                                                                   ggATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCATCATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCg                                                                                                                                                                                                            >  1:2056303/1‑289 (MQ=255)
                                                                   ggATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGc                                                                                                                                                                                                             <  2:2208008/288‑1 (MQ=255)
                                                                    gATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAAt                                                                                                                                                                                                                      <  1:1023742/278‑1 (MQ=255)
                                                                     aTCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGa                                                                                                                                                                                                           >  1:526393/1‑288 (MQ=255)
                                                                      tCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGAc                                                                                                                                                                                                          <  2:1140692/288‑1 (MQ=255)
                                                                         ggCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCTCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTAAGTCGAATACGTTCTGCGACCTcc                                                                                                                                                                                                      >  1:1194795/1‑289 (MQ=255)
                                                                         ggCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTc                                                                                                                                                                                                       >  2:1854576/1‑288 (MQ=255)
                                                                          gCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTcc                                                                                                                                                                                                      >  2:554110/1‑288 (MQ=255)
                                                                          gCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTcc                                                                                                                                                                                                      >  1:675580/1‑288 (MQ=255)
                                                                                gTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGcc                                                                                                                                                                                                <  1:1210639/288‑1 (MQ=255)
                                                                                    ggCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGt                                                                                                                                                                                           <  1:378835/289‑1 (MQ=255)
                                                                                          cGCAGCGTGAAGGACAGGAGGGATGGCTGGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACt                                                                                                                                                                                     <  2:1050729/289‑1 (MQ=255)
                                                                                            cAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCACCATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGTCGCCTCCGGCAGtctc                                                                                                                                                                                    >  2:1176147/1‑288 (MQ=255)
                                                                                               cGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGCATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTcgcg                                                                                                                                                                                 <  1:2262646/288‑1 (MQ=255)
                                                                                                        ccGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGaa                                                                                                                                                                       <  1:1142264/289‑1 (MQ=255)
                                                                                                             aGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATcaca                                                                                                                                                                  <  2:675580/289‑1 (MQ=255)
                                                                                                                aTGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCCACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGCCCTCCGCAGCCTCCGTCAGACTCGCTCCTGTCAGACTCACAGaa                                                                                                                                                               >  2:270223/1‑289 (MQ=255)
                                                                                                                aTGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACaa                                                                                                                                                               >  1:2650389/1‑289 (MQ=255)
                                                                                                                 tGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCACCCCCCGTCAGCCTCCCGCCTGGCAGAATCACACaaa                                                                                                                                                              >  2:1454250/1‑289 (MQ=255)
                                                                                                                 tGGCGGGAAGGCTTGGCCCATTTTTTCCCCGCCCTTTAACGTTTATACCTCGCGAATACCCGATTACGCCCAGACTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACaa                                                                                                                                                               <  2:511034/288‑1 (MQ=255)
                                                                                                                  ggCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACaaa                                                                                                                                                              >  2:1983763/1‑288 (MQ=255)
                                                                                                                   gCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACaaaa                                                                                                                                                             <  2:2367344/288‑1 (MQ=255)
                                                                                                                        aaGGCCTGGACCATGTTTTCCCCGCCCGTTAGGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAGAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAActcct                                                                                                                                                        <  2:347800/288‑1 (MQ=255)
                                                                                                                            gCTGGACCATTTTTTCTCCGCCCGTTGAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTcac                                                                                                                                                     <  1:2466772/287‑1 (MQ=255)
                                                                                                                             cTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGaa                                                                                                                                                                       <  2:2263504/268‑1 (MQ=255)
                                                                                                                              tGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACaaaa                                                                                                                                                             >  1:2715039/1‑277 (MQ=255)
                                                                                                                                  ccATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGAcc                                                                                                                                             <  1:1504469/289‑1 (MQ=255)
                                                                                                                                          tctcCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCCGACTCGCGCCTGGCAGAATCACCCAAAACTCCTCACCCCCGACCCGCACGGc                                                                                                                                     >  1:131854/1‑289 (MQ=255)
                                                                                                                                           ctcCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAGGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGcc                                                                                                                                                                                                >  2:2738895/1‑229 (MQ=255)
                                                                                                                                           ctcCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAGGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGcc                                                                                                                                                                                                <  1:2738895/229‑1 (MQ=255)
                                                                                                                                           ctcCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCa                                                                                                                                    <  1:2171713/289‑1 (MQ=255)
                                                                                                                                             ccGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAAttt                                                                                                                                                                                                                               >  2:480048/1‑196 (MQ=255)
                                                                                                                                             ccGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAAttt                                                                                                                                                                                                                               <  1:480048/196‑1 (MQ=255)
                                                                                                                                                      aaGCGTTATCGCTCGCGCATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTgcgc                                                                                                                         <  1:1128360/289‑1 (MQ=255)
                                                                                                                                                      aaGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTgcgc                                                                                                                         <  1:631253/289‑1 (MQ=255)
                                                                                                                                                           ttATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCCGAATCACACAAAACCCCTCACCACCGACCCGCCCGGCAACGCCCTCctcaccca                                                                                                                    >  2:2663014/1‑289 (MQ=255)
                                                                                                                                                             aTCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGcgcacgca                                                                                                                    <  1:1114761/287‑1 (MQ=255)
                                                                                                                                                              tcgctcgcGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAgg                                                                                                                 <  1:551225/289‑1 (MQ=255)
                                                                                                                                                                   cgcgAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGAc                                                                                                                                              <  2:1223489/255‑1 (MQ=255)
                                                                                                                                                                   cgcgAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGAc                                                                                                                                              <  2:1726389/255‑1 (MQ=255)
                                                                                                                                                                      gAATACCCGATTACGCCCAGCCTGTTTAGCTAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCAACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCta                                                                                                         <  1:2597106/289‑1 (MQ=255)
                                                                                                                                                                                ttACGCCCGGCCTGTTTAGCGAGATAAAGCCGACGGGCGGCCAGTGAATGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCgg                                                                                               <  2:2557246/289‑1 (MQ=255)
                                                                                                                                                                                ttACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCgg                                                                                               <  1:1959254/289‑1 (MQ=255)
                                                                                                                                                                                ttACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCgg                                                                                               <  2:370963/289‑1 (MQ=255)
                                                                                                                                                                                ttACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCgg                                                                                               <  1:1983763/289‑1 (MQ=255)
                                                                                                                                                                                         gCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAgg                                                                                                                 <  1:1691326/262‑1 (MQ=255)
                                                                                                                                                                                         gCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATgag                                                                                      >  2:856854/1‑289 (MQ=255)
                                                                                                                                                                                              tttAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCTAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGagaaaga                                                                                 >  1:1245652/1‑289 (MQ=255)
                                                                                                                                                                                                  gCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAacac                                                                             >  2:753909/1‑289 (MQ=255)
                                                                                                                                                                                                        tAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTCCTAATTAATCCGGCGCCATGGGAAAGCACACGGTcc                                                                        >  2:153224/1‑287 (MQ=255)
                                                                                                                                                                                                                  ggTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCAtt                                                                                                                                                                                                                                     >  1:2188238/1‑121 (MQ=255)
                                                                                                                                                                                                                         cagtgactGGAGTTGTTCAAAATCCTAATCACCGGTTTCCTCGCTGCTGCTTCCCCCCAGCGAGGCACTGTTGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCCTGTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCCCACCCGCGCCTGGCAGAATCACACAAAACTCCTTACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGTAACTGCTAATTAATCCGTCAGCATGGGAAAGAACACGGTCTCCCGCCTGATGACCAAAg                                                      <  1:1340762/283‑1 (MQ=255)
                                                                                                                                                                                                                         cagggactGGGGTTGTTCAAAGTCGTAAGCGCCGGTTTCCTCGCGGCTGCTTACCCGCGGCGAGGCACTGATGAGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAg                                                      <  2:1230359/283‑1 (MQ=255)
                                                                                                                                                                                                                             gactGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGc                                                     <  1:1791204/284‑1 (MQ=255)
                                                                                                                                                                                                                             gactGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCAGGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGc                                                     <  2:1935355/284‑1 (MQ=255)
                                                                                                                                                                                                                                  gAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTg                                                                                                            >  1:116558/1‑226 (MQ=255)
                                                                                                                                                                                                                                      tcttCCAACTCACAATCACCGGTTTCCTAGCTGCTGCTTACCCCAAGCGAGGCTCTGCTGCGTATCGTCGTACTCTTAGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAAt                                           <  2:2095490/285‑1 (MQ=255)
                                                                                                                                                                                                                                        ttCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTg                                                                                                            <  1:738358/220‑1 (MQ=255)
                                                                                                                                                                                                                                             aaTCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCTTCGTACTCGTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTaaa                                  <  1:592268/289‑1 (MQ=255)
                                                                                                                                                                                                                                             aaTCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTaaa                                  <  2:518995/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  tAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGgca                                                                                             >  1:395829/1‑225 (MQ=255)
                                                                                                                                                                                                                                                  tAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATgg                              >  1:1017009/1‑288 (MQ=255)
                                                                                                                                                                                                                                                         cGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAAt                                           <  2:389421/268‑1 (MQ=255)
                                                                                                                                                                                                                                                         cGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATc                      >  1:503234/1‑289 (MQ=255)
                                                                                                                                                                                                                                                            tttCCCCGGTGCTGCTGACACACAGCCAGGCACTGTTACGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGAc                   <  2:1330486/289‑1 (MQ=255)
                                                                                                                                                                                                                                                              tCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCt                 >  2:2513297/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                     tgctgctTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCATCATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGa           <  2:2056303/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                      gctgctTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTg                                                                                                            <  1:2611492/190‑1 (MQ=255)
                                                                                                                                                                                                                                                                      gctgctTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTg                                                                                                            >  2:2611492/1‑190 (MQ=255)
                                                                                                                                                                                                                                                                      gctgctTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACa         >  1:1858188/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                      
TGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGACTCTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGGCTGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAG  >  CP042583/1663642‑1664199

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A