Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,669,298 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,669,2980GC99.3% 664.2 / NA 285intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (2/0);  new base C (129/154);  total (131/154)
Fisher's exact test for biased strand distribution p-value = 2.10e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,669,2990CG99.3% 663.2 / NA 285intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  major base G (126/154);  minor base A (2/0);  total (131/154)
Fisher's exact test for biased strand distribution p-value = 2.05e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,669,3000TA99.7% 677.6 / NA 285intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (130/154);  minor base C (1/0);  total (131/154)
Fisher's exact test for biased strand distribution p-value = 4.60e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 285 total aligned reads displayed.

TGCGGCAGAAAATGTTTGCCGTCGATGATTTTCGGATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGGCTGTTCTTTTTGCTTACGCCAGCCAGGCTAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCACTGTCCGCCAATGCTTTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATAGATCGATA  >  CP042583/1669020‑1669574
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                  
  cGGCAGAAAATGTTTGCCGTCGATGATTTTCGGATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGTCGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGccg                                                                                                                                                                                                                                                                           >  2:303146/1‑286 (MQ=255)
       gAAAATGTTTGCCGTCGATGATTTTCGGATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAgg                                                                                                                                                                                                                                                                     >  1:142873/1‑289 (MQ=255)
           aTGTTTGCCGTCGATGATTTTCGGATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGaaa                                                                                                                                                                                                                                                                 <  1:1115391/289‑1 (MQ=255)
              tttGCCGTCGATGATTTTCGGATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCg                                                                                                                                                                                                                                                              <  2:2141721/289‑1 (MQ=255)
                tgcctcgattgatTTTCGGATCGTCGGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGc                                                                                                                                                                                                                                                            <  2:142873/280‑1 (MQ=255)
                tgcctccGATGATTTTCGGATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCTTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGc                                                                                                                                                                                                                                                            <  1:503336/283‑1 (MQ=255)
                tcccGTCGATGATTTTCGGATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGc                                                                                                                                                                                                                                                            <  1:1841860/287‑1 (MQ=255)
                tGCCTTCGACGATTTTCGGATCGTCTAGCCCCTTATATTCTGTATCCACCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGc                                                                                                                                                                                                                                                            <  2:1841642/289‑1 (MQ=255)
                       gatgatTTTCGGATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTaaa                                                                                                                                                                                                                                                     <  1:2354019/289‑1 (MQ=255)
                       gatgatTTTCGGATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGAGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGCATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCAAAAAGGGCTGACAAGGAAAACCggaacataaa                                                                                                                                                                                                                                                     >  2:2678238/1‑281 (MQ=255)
                          gatTTTCGGATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACa                                                                                                                                                                                                                                                  <  1:2281607/289‑1 (MQ=255)
                          catTTTCGAGTCGTCGTGCCCATGATCTTCTGCATCGACCACGTCATAGCCCAGTTCGTCCGGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACa                                                                                                                                                                                                                                                  <  2:63299/288‑1 (MQ=255)
                            ttttCGGCTCGTCTGGCCCATTATCTTCTGCATCAGCCCCGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATc                                                                                                                                                                                                                                                <  1:309636/289‑1 (MQ=255)
                            ttttCGGATCGTCTGGCCCATTCTCTTCTTCCTCAGCCACGTCATAGCCCAGTTCGTCCAGAGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTAACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATc                                                                                                                                                                                                                                                <  2:1323920/289‑1 (MQ=255)
                            ttttCGGATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATc                                                                                                                                                                                                                                                <  2:367993/289‑1 (MQ=255)
                                    ccgcttGGCCCCTTTGCTTTTGCAGCAGCACCGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACAGCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAg                                                                                                                                                                                                                                        <  2:482549/284‑1 (MQ=255)
                                      gTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATc                                                                                                                                                                                                                                                <  2:398213/279‑1 (MQ=255)
                                      gTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCg                                                                                                                                                                                                                                               <  2:763681/280‑1 (MQ=255)
                                        ctagCCCATTCTCTTCTGGATACGCCACGTCAGAGCCCAGTTCGGCCAGCGTCTGTATGGGGGTGCGGAACGTTGTACCCTGGTAGTGACTTTTCAGGTTTTTGACGTTAT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAt                                                                                                                                                                                                                                    <  2:439197/286‑1 (MQ=255)
                                            cccATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAtgtg                                                                                                                                                                                                                                 <  1:1488085/288‑1 (MQ=255)
                                                ttATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGAc                                                                                                                                                                                                                            >  2:2698639/1‑289 (MQ=255)
                                                 tATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACg                                                                                                                                                                                                                           >  1:710601/1‑289 (MQ=255)
                                                 tATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGAAGACGCGCGTCGATAATGCGTACCAAATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCTAAAACGGCTGCCAACGGACACCGGACAGCAAAACATCGGTTTCACGAATGTGTTGACg                                                                                                                                                                                                                           >  2:2656871/1‑289 (MQ=255)
                                                   tcttctGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGaa                                                                                                                                                                                                                         <  1:616740/289‑1 (MQ=255)
                                                        tGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTGACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGt                                                                                                                                                                                                                    <  1:1273298/289‑1 (MQ=255)
                                                                 gacataaagagccAGTTCGTGCGGCGGTGTCATCATGATACGGAACGTTCTGTCCTTGTCGTGACTTTTGCGTTTTTTGCCGTTTTGCGA‑CACAAACATCACCGGAGGGAGCGGGTCGATAAGGCGTACCACCACAAAAAGCAGCGGGCCCTGGGTAGCGCAGGCAAAACCGTGGGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTccgccgc                                                                                                                                                                                                            <  2:2605079/277‑1 (MQ=255)
                                                                    gTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCg                                                                                                                                                                                                                                                              >  1:2452492/1‑235 (MQ=255)
                                                                         aGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCtcatc                                                                                                                                                                                                   >  1:1538323/1‑289 (MQ=255)
                                                                         aGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCtcat                                                                                                                                                                                                    >  1:2682825/1‑288 (MQ=255)
                                                                              aGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGGTGACGACTATGTTTCGCCGCCGCCTCAtcactc                                                                                                                                                                                               >  1:1602346/1‑288 (MQ=255)
                                                                                ttCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAt                                                                                                                                                                                                                                    >  1:832906/1‑249 (MQ=255)
                                                                                ttCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCAtcactcac                                                                                                                                                                                             >  1:785255/1‑288 (MQ=255)
                                                                                ttCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACATTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGCCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTCTTCGATACGCCAGCCAGCTAAAATGGCTGACAAGGGAAACCGGCAAGTAAAACATCGTGTTCAGGAATGTGGTGACGAAAATGTTCCGCCGCCGCGTCAtcccccac                                                                                                                                                                                             >  2:847084/1‑288 (MQ=255)
                                                                                   gTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGcc                                                                                                                                                                                          >  2:5526/1‑288 (MQ=255)
                                                                                     ccAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCctt                                                                                                                                                                                        <  1:2665671/288‑1 (MQ=255)
                                                                                         cGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACa                                                                                                                                                                                                                                                  >  2:1104610/1‑226 (MQ=255)
                                                                                         cGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTa                                                                                                                                                                                   >  1:379906/1‑289 (MQ=255)
                                                                                          gTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGc                                                                                                                                                                                                                                                            <  2:2684081/215‑1 (MQ=255)
                                                                                             tGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCttt                                                                                                                                                                                    <  1:1054577/284‑1 (MQ=255)
                                                                                                       tgCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGAt                                                                                                                                                                     >  1:550606/1‑289 (MQ=255)
                                                                                                       tgCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGAt                                                                                                                                                                     >  1:870166/1‑289 (MQ=255)
                                                                                                               gTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGa                                                                                                                                                             <  1:2376227/289‑1 (MQ=255)
                                                                                                                  ttACCCTGGTCGTGACTTTTCAGGTTTTTGCCGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGatat                                                                                                                                                          <  1:968603/289‑1 (MQ=255)
                                                                                                                          gTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCctt                                                                                                                                                                                        <  1:2429970/251‑1 (MQ=255)
                                                                                                                          gTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTa                                                                                                                                                  >  1:1293147/1‑289 (MQ=255)
                                                                                                                          gTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCCTTATGGCTGTGGGTGATTGCGCGGGTATCTTCATTa                                                                                                                                                  >  2:1207724/1‑289 (MQ=255)
                                                                                                                          gTCGTGACTTTTCAGGTTTTTGACGTTTA‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGa                                                                                                                                                                                                                             >  1:1828535/1‑214 (MQ=255)
                                                                                                                          gTCGTGACTTTTCAGGTTTTTGACGTTTA‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGa                                                                                                                                                                                                                             <  2:1828535/214‑1 (MQ=255)
                                                                                                                                  ttttCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGCGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAatgatg                                                                                                                                          <  2:24497/289‑1 (MQ=255)
                                                                                                                                    ttCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCg                                                                                                                                        >  1:2254562/1‑289 (MQ=255)
                                                                                                                                     tCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGa                                                                                                                                                                      >  2:1890711/1‑258 (MQ=255)
                                                                                                                                          tttttGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCg                                                                                                                                  <  2:1990120/289‑1 (MQ=255)
                                                                                                                                             ttgccgtcat‑CGCGCAAAAACAGCGGCGGACGACGCGGCTCGATAGTGCGTACCACAGCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGAt                                                                                                                               <  2:2380271/280‑1 (MQ=255)
                                                                                                                                             ttGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGAt                                                                                                                               <  1:1414365/289‑1 (MQ=255)
                                                                                                                                             ttGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGAt                                                                                                                               <  1:2633245/289‑1 (MQ=255)
                                                                                                                                             ttGACCGTTT‑CGAGAAAAAACATCGCCGGACGACGCGCGTCGATAATGCGGACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGAt                                                                                                                               <  2:1284155/289‑1 (MQ=255)
                                                                                                                                             tgaaCGTTTT‑CCAGCACGACCATCGCCGGACGACGCGCGTCGATAATGCGTACCACAGCAAAAAGCAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGAt                                                                                                                               <  2:1050683/286‑1 (MQ=255)
                                                                                                                                                   gttttagataccaAGCATCTCCACACGACGCGCGTCCATAATCAGAACCACATCAAAAAACCGCGTGGCCTTGTAACCGCAGCCAAAACCGCTCGCCGGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGACAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCaa                                                                                                                          <  2:1602346/278‑1 (MQ=255)
                                                                                                                                                      t‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCaataat                                                                                                                      >  1:416308/1‑289 (MQ=255)
                                                                                                                                                         gAGCACAAACATCCACGGACGACCGGCGTCGATAATGCGTACCACATCAAACACCAGCGTGCCCTGAGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATgg                                                                                                                    <  2:25916/289‑1 (MQ=255)
                                                                                                                                                            cacaAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGtt                                                                                                                  <  2:710601/288‑1 (MQ=255)
                                                                                                                                                             acacacATCGCCGGGAGACACGACTGGATGAAGCTTAACCAATAAAAAACCATCGGGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCACGAGCGATTTCTGTTGCGATAAGCCAGCCAGCGAAAATGGCTGACAAGGGAAGCCGGCCAGTAATACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGTTATTTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTgg                                                                                                                <  2:2215095/289‑1 (MQ=255)
                                                                                                                                                             acaAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGtt                                                                                                                  <  2:948538/287‑1 (MQ=255)
                                                                                                                                                             acaAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGtt                                                                                                                  <  1:1207724/287‑1 (MQ=255)
                                                                                                                                                             acaAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGtt                                                                                                                  <  1:259530/287‑1 (MQ=255)
                                                                                                                                                               aaaCATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTg                                                                                                                                                                       >  2:254946/1‑232 (MQ=255)
                                                                                                                                                                  cATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTta                                                                                                           <  2:888815/289‑1 (MQ=255)
                                                                                                                                                                    tCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCGGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGACTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTtata                                                                                                         <  1:572412/289‑1 (MQ=255)
                                                                                                                                                                    tCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTtata                                                                                                         <  1:2049357/289‑1 (MQ=255)
                                                                                                                                                                        cGGACGAAGCGCGTAGATAATGCGTACCCCAGCAAAAAACAGCGTGACCTGGGTATCGCAGGCAAAACGTTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTg                                                                                                     <  2:1086223/289‑1 (MQ=255)
                                                                                                                                                                               cgcgcgTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGa                                                                                                                                                                                                                             <  2:786350/162‑1 (MQ=255)
                                                                                                                                                                                    gTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTg                                                                                                                                                                       <  2:2301088/211‑1 (MQ=255)
                                                                                                                                                                                                  ccACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTc                                                                              >  1:2208139/1‑286 (MQ=255)
                                                                                                                                                                                                    acaTCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTgg                                                                         <  1:2305507/289‑1 (MQ=255)
                                                                                                                                                                                                      aTCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATgg                                                                                                                                                                                <  1:899579/184‑1 (MQ=255)
                                                                                                                                                                                                      aTCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGtt                                                                                                                  >  2:2211102/1‑246 (MQ=255)
                                                                                                                                                                                                           aaaaCAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAacac                                                                  >  1:2698515/1‑289 (MQ=255)
                                                                                                                                                                                                               cAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCAc                                                              <  2:2110290/289‑1 (MQ=255)
                                                                                                                                                                                                                  cGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGc                                                                                                                                                                                                                                                            <  1:1726309/96‑1 (MQ=255)
                                                                                                                                                                                                                  cGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGc                                                                                                                                                                                                                                                            >  2:1726309/1‑96 (MQ=255)
                                                                                                                                                                                                                  cGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTgg                                                                                                                >  1:1937747/1‑236 (MQ=255)
                                                                                                                                                                                                                    tGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCa                                                               >  1:1675827/1‑283 (MQ=255)
                                                                                                                                                                                                                       ccTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCg                                                                                              >  2:1564133/1‑249 (MQ=255)
                                                                                                                                                                                                                       ccTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCg                                                                                              <  1:1564133/249‑1 (MQ=255)
                                                                                                                                                                                                                           ggTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCACTGTCCGCCAAt                                                   <  1:1387030/288‑1 (MQ=255)
                                                                                                                                                                                                                                cGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGAt                                                                                                                               >  1:2535642/1‑207 (MQ=255)
                                                                                                                                                                                                                                cGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACg                                                                 >  1:1966182/1‑269 (MQ=255)
                                                                                                                                                                                                                                cGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCACTGTCCGCCAAtcgattc                                             >  1:1768784/1‑283 (MQ=255)
                                                                                                                                                                                                                                cGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCGGACAAGGGAAACCGGCCAGAAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATAACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTGGCCGGATCGAAATAATGGTTGGCTTTATAAGTGCGTACGGCATGTTTGTTCCATTCGCTGGTAAACACGCACTGTCCGCCAATGcatc                                              >  2:1942789/1‑285 (MQ=255)
                                                                                                                                                                                                                                     gCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATc                                                                                                                                                                                                                                                >  1:1475881/1‑89 (MQ=255)
                                                                                                                                                                                                                                     gCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATc                                                                                                                                                                                                                                                <  2:1475881/89‑1 (MQ=255)
                                                                                                                                                                                                                                     gCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTTGCTTTATAAGTGCGTACCGCATGTTTGGTCCATTCGCTGGTAAACACGCAATGTCCGCCCAtcgaatcaaaa                                         >  2:1387030/1‑278 (MQ=255)
                                                                                                                                                                                                                                     gCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCACTGTCCGCCAATCGATTCaaaa                                         >  1:1612593/1‑288 (MQ=255)
                                                                                                                                                                                                                                     gCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGCGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCACTTGCTGGTAACCACGCACTGTCCGCCAACCCATTCaaaa                                         >  2:1481795/1‑288 (MQ=255)
                                                                                                                                                                                                                                               gcgcCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATc                                                                                                                                                         >  1:2324259/1‑166 (MQ=255)
                                                                                                                                                                                                                                               gcgcCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATc                                                                                                                                                         <  2:2324259/166‑1 (MQ=255)
                                                                                                                                                                                                                                               gcgcCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGtt                                                                                                                  >  2:2502763/1‑205 (MQ=255)
                                                                                                                                                                                                                                               gcgcCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGtt                                                                                                                  <  1:2502763/205‑1 (MQ=255)
                                                                                                                                                                                                                                               gcgcCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCACTGTCCGCCAATCGATTCAAAACCGCGACGGAt                              <  1:1019325/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                           tACGCCAGCCAGCGAAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCACTGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATAGATCGATa  >  1:2384779/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                  
TGCGGCAGAAAATGTTTGCCGTCGATGATTTTCGGATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTT‑CGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGGCTGTTCTTTTTGCTTACGCCAGCCAGGCTAAATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAATGTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCACTGTCCGCCAATGCTTTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATAGATCGATA  >  CP042583/1669020‑1669574

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A