Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,677,046 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,677,0460AT99.5% 520.3 / NA 219intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (136/82);  minor base C (1/0);  total (137/82)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,677,0470GC99.5% 509.5 / NA 219intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (136/80);  total (137/82)
Fisher's exact test for biased strand distribution p-value = 3.73e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,677,0480CG99.5% 518.4 / NA 219intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (137/81);  total (137/82)
Fisher's exact test for biased strand distribution p-value = 3.74e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 219 total aligned reads displayed.

AACAAAATCTTGAAAGTTTCTTCCCTGAGATCCCCGTTGAATTTCATATTAATAAAGTGAACGAGCATTATCATGTGCCTTTATTACTTAGCCAATATGGGTATAGTACCTATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAAAGTGATGTTACGGCCGAGAGCG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATAAAGTTTCCGGTTATAATAACTTCTATGAATTCGGGCTGGATAAAGCCGATCCCGCCGCTAATGCTGGTAGCCTGAAAACC  >  CP042583/1676768‑1677327
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                        
aaCAAAATCTTGAAAGTTTCTTCCCTGAGATCCCCGTTGAATTTCATATTAATAAAGTGAACGAGCATTATCATGTGCCTTTATTACTTAGCCAATATGGGTATTCAACCTATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTAGGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCtt                                                                                                                                                                                                                                                                                 >  2:1815305/1‑289 (MQ=255)
             aaGTTTCTTCCCTGCGATCCCCGTTGAATTTCATATTAATAAAGTGAACGAGCATTATCATGTACCTTTATTGCTTAGCCAATATGGGTATTCAACCTATCATGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTTGG‑TATTCTTTATGAAGCGTCgg                                                                                                                                                                                                                                                                    <  2:1204192/289‑1 (MQ=255)
                      cccTGAGATCCCCGTTGAATTTCATATTAATAAAGTGAACGAGCATTATCATGTGCCTTTATTACTTAGCCAATATGGGTATTCAACCTATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTAGG‑TATTCTTTATTAAGCGTCGGCAGGTGGTa                                                                                                                                                                                                                                                           >  2:1348690/1‑289 (MQ=255)
                                  cGTTGAATTTCATATTAATAAATTGAGCGAGCATTATCATGTGCCTTTATTACTTAGCCAATATGGGTATTCAACCTATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCa                                                                                                                                                                                                                                                                  <  1:136924/270‑1 (MQ=255)
                                                        gTGAACGAGCATTATCATGTGCCTTTATTACTTAGCCAATATGGGTATTCAACCTATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCActttctt                                                                                                                                                                                                                         >  1:856080/1‑289 (MQ=255)
                                                           aaCGAGCATTATCATGTGCCTTTATTACTTAGCCAATATGGGTATTCAACCTATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTg                                                                                                                                                                                                                       >  1:2109314/1‑288 (MQ=255)
                                                                     aTCATGTGCCTTTATTACTTAGCCAATATGGGTATTCAACCTATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTg                                                                                                                                                                                                             >  2:1172623/1‑288 (MQ=255)
                                                                        aTGTGCCTTTATTACTTAGCCAATATGGGTATTCAACCTATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCa                                                                                                                                                                                                         <  1:1781006/289‑1 (MQ=255)
                                                                         tgtgCCTTTATTACTTAGCCAATATGGGTATTCAACCTATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCAt                                                                                                                                                                                                        >  2:1992286/1‑289 (MQ=255)
                                                                           tgCCTTTATTACTTAGCCAATATGGGTATTCAACCTATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTATACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATg                                                                                                                                                                                                       >  1:1664603/1‑288 (MQ=255)
                                                                           tgCCTTTATTACTTAGCCAATATGGGTATTCAACCTATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCAATTTCTTTGCCTCACGCTGCGCATg                                                                                                                                                                                                       >  1:2200776/1‑288 (MQ=255)
                                                                             ccTTTATTACTTAGCCAATATGGGTATTCAACCTATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCg                                                                                                                                                                                                    >  1:979075/1‑289 (MQ=255)
                                                                                ttattaCTTAGCCAATATGGGTATTCAACCTATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCActttct                                                                                                                                                                                                                          <  2:1538858/264‑1 (MQ=255)
                                                                                ttattaCTTAGCCAATATGGGTATTCAACCTATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCActttct                                                                                                                                                                                                                          >  1:1538858/1‑264 (MQ=255)
                                                                                ttattaCTTAGCCAATATGGGTATTCAACCTATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTTCCTCACGCTGCGCATGCCGa                                                                                                                                                                                                   >  2:2494206/1‑287 (MQ=255)
                                                                                ttattaCTTAGCCAATATGGGTATTCAACCTATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCg                                                                                                                                                                                                    >  1:1850408/1‑286 (MQ=255)
                                                                                     aCTTAGCCAATATGGGTATTCAACCTATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCtt                                                                                                                                                                                            >  1:2036397/1‑289 (MQ=255)
                                                                                       ttggCCAAGAGGGGTATTTAACCTTACGTGGCAGTTAATGCATCAATATGTAAAAGCAGATCTCGGCTACTGTTAGGGAGGACACTCCCTGACAGTTTAACAGTAAACGGCTATTGCTGGATAACGACAAAAAAGTGTGACGGATTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TACTCGTTATGAAGAGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGAAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAg                                                                                                                                                                                          <  2:809215/286‑1 (MQ=255)
                                                                                       ttAGCCAATATGGGTATTCAACCTATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAg                                                                                                                                                                                          <  2:501076/289‑1 (MQ=255)
                                                                                           ccAATATGGGTATTCAACCTATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTgg                                                                                                                                                                                      >  1:81600/1‑289 (MQ=255)
                                                                                               tatGGGTATTCAACCTATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACCGTAAACGGCTCTTGCTGGCTAACGACAAACAAGTGTGATGGCTTATGAAAAAGAAGCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTa                                                                                                                                                                                  <  2:2629774/289‑1 (MQ=255)
                                                                                                     tattcaaCCTATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCa                                                                                                                                                                                                                                                     >  2:572882/7‑216 (MQ=255)
                                                                                                     tattcaaCCTATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGa                                                                                                                                                                            >  1:451454/7‑289 (MQ=255)
                                                                                                     tattcaaCCTATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGACGAGTCGG‑TCTTCTTTATGAAGCGGTGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTTCCTCACGCTGCGCATGCGCATCTGCTTTGCTGGCTTCAAGGGa                                                                                                                                                                            >  2:1116204/7‑289 (MQ=255)
                                                                                                        tcaaCCTATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACg                                                                                                                                                                         >  1:1614986/4‑289 (MQ=255)
                                                                                                               aTCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAg                                                                                                                                                                                                                                                                 <  2:2582397/194‑1 (MQ=255)
                                                                                                               aTCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAg                                                                                                                                                                                                                                                                 >  1:2582397/1‑194 (MQ=255)
                                                                                                               aTCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATcgcc                                                                                                                                                                   >  2:880189/1‑288 (MQ=255)
                                                                                                                 cGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCTGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGAACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATcgcccg                                                                                                                                                                 >  1:1729856/1‑288 (MQ=255)
                                                                                                                    ggCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATcgcccgccc                                                                                                                                                              >  1:1436746/1‑288 (MQ=255)
                                                                                                                      cAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATcgcccgcccgc                                                                                                                                                            >  1:1766601/1‑288 (MQ=255)
                                                                                                                          tAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGcccgcccc                                                                                                                                                         <  1:1094274/287‑1 (MQ=255)
                                                                                                                                       tGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAGAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAgc                                                                                                                                             >  1:1408966/1‑286 (MQ=255)
                                                                                                                                       tGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAgc                                                                                                                                             >  1:509348/1‑286 (MQ=255)
                                                                                                                                        gTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTg                                                                                                                                         <  1:158832/289‑1 (MQ=255)
                                                                                                                                         tAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTgg                                                                                                                                        >  1:917894/1‑289 (MQ=255)
                                                                                                                                         tAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTgg                                                                                                                                        >  1:2187745/1‑289 (MQ=255)
                                                                                                                                                 gATCTCTGCTACTGTTAGGGAGGACACTCCCCGACAGATTAACAGTAAACGGCTCTTGCTGGCT‑ACGACAAAAAAGGGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTTGTAAAAGCCCTGGGCATCAGGGCAACTGCACTTTCTTTGCCTAACGCCGCCCATGCCGTTCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCCCCGGAAAACGGCTGGAGTTcgcca                                                                                                                               >  2:93423/1‑285 (MQ=255)
                                                                                                                                                   tctcTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCaa                                                                                                                              >  1:2484098/1‑289 (MQ=255)
                                                                                                                                                              gTTAGGGATGACACTCCCTGACAGATTAACAGTAAACGGATCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCt                                                                                                                   <  2:469927/289‑1 (MQ=255)
                                                                                                                                                              gTTAGGGAGGACACTCCCTGACAGATTAACAGGAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGACGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCt                                                                                                                   <  2:1195469/289‑1 (MQ=255)
                                                                                                                                                               ttAGGGAGGACACTCCCTGACAGATTAACAGTACACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTgccgcccg                                                                                                                  >  1:1130894/1‑287 (MQ=255)
                                                                                                                                                                 aGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGc                                                                                                                >  2:187425/1‑289 (MQ=255)
                                                                                                                                                                 aGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGc                                                                                                                >  1:717768/1‑289 (MQ=255)
                                                                                                                                                                 aGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCCTAGCTGTTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAACACCGCTGGAGTTCCGCCAGCCTGCCCCCTgc                                                                                                                 >  2:2533764/1‑287 (MQ=255)
                                                                                                                                                                   ggaggaCACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCaa                                                                                                              >  1:655613/1‑289 (MQ=255)
                                                                                                                                                                   ggaggaCACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCCTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTACAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAACGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCaa                                                                                                              >  2:2392322/1‑289 (MQ=255)
                                                                                                                                                                      ggaCACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTa                                                                                                                                                                                  <  2:234178/218‑1 (MQ=255)
                                                                                                                                                                      ggaCACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTa                                                                                                                                                                                  >  1:234178/1‑218 (MQ=255)
                                                                                                                                                                       gaCACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCTGATGTTACGGCCGAGTCGG‑TATTc                                                                                                                                                                                                                                                                                   <  1:2408812/120‑1 (MQ=255)
                                                                                                                                                                       gaCACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTGTGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGGCCTGGGGTTCAACCAGCCCACCCCCCGGCAAAATa                                                                                                          >  2:2183711/1‑289 (MQ=255)
                                                                                                                                                                       gaCACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATa                                                                                                          >  2:2291281/1‑289 (MQ=255)
                                                                                                                                                                         cacTTCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATaa                                                                                                         >  2:817572/1‑288 (MQ=255)
                                                                                                                                                                         cacTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACg                                                                                                                                                                                                                >  1:744864/1‑185 (MQ=255)
                                                                                                                                                                          acTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAAcc                                                                                                       <  2:2036397/289‑1 (MQ=255)
                                                                                                                                                                          acTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAAcc                                                                                                       <  1:880189/289‑1 (MQ=255)
                                                                                                                                                                               cTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCa                                                                                                  <  1:2426335/289‑1 (MQ=255)
                                                                                                                                                                                      aTTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAgcgc                                                                                                                                           <  2:2705499/241‑1 (MQ=255)
                                                                                                                                                                                      aTTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAgcgc                                                                                                                                           >  1:2705499/1‑241 (MQ=255)
                                                                                                                                                                                      aTTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGCGTTCAGCAAGCCGGCCGGCTGGCAAAATAACCTGcccatgcag                                                                                            >  2:362630/1‑281 (MQ=255)
                                                                                                                                                                                      aTTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCa                                                                                                               <  2:1762857/269‑1 (MQ=255)
                                                                                                                                                                                      aTTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACg                                                                                            >  1:1088592/1‑288 (MQ=255)
                                                                                                                                                                                      aTTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACg                                                                                            >  1:1175776/1‑288 (MQ=255)
                                                                                                                                                                                      aTTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACg                                                                                            >  1:2164206/1‑288 (MQ=255)
                                                                                                                                                                                        tAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTg                                                                                                                                         >  2:1090429/1‑241 (MQ=255)
                                                                                                                                                                                              tAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCt                                                                                                                                                                                        >  1:212688/1‑188 (MQ=255)
                                                                                                                                                                                              tAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCt                                                                                                                                                                                        <  2:212688/188‑1 (MQ=255)
                                                                                                                                                                                                aaCGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACg                                                                                                                                                                                                                <  2:145954/162‑1 (MQ=255)
                                                                                                                                                                                                aaCGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACg                                                                                                                                                                                                                >  1:145954/1‑162 (MQ=255)
                                                                                                                                                                                                aaCGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTATAGGGAACGATCGCCCGCCCGCCCCCGCCGCAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCACCTGACGCGAGCGGATaa                                                                                 >  2:482666/1‑289 (MQ=255)
                                                                                                                                                                                                aaCGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATaa                                                                                 >  1:1161794/1‑289 (MQ=255)
                                                                                                                                                                                                aaCGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATaa                                                                                 >  1:2508052/1‑289 (MQ=255)
                                                                                                                                                                                                aaCGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCAGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATaa                                                                                 >  1:32847/1‑289 (MQ=255)
                                                                                                                                                                                                     ctctTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATAAAGtt                                                                             >  1:73341/1‑288 (MQ=255)
                                                                                                                                                                                                      tctTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATAAAGTTTc                                                                           <  1:1992286/289‑1 (MQ=255)
                                                                                                                                                                                                      tctTGATGGTGAAGGAAAAAAAAGTGTGATGGCTGATGTAAAAGAATCAATTTTTAAAATATTCGGATGTTGCGGCTGA‑TGCGTTATTCTTTATGAATCGTCGGCAGGTGTTAGAAGCACTGGCGATCAGGGCAACTGCGATTTCTTTGCCTCACGCTGCGCATGCCGATCTGATTAGCTGGTTTACAGGGAACGATCGCCCGCCCGCCCCCGCCGGAGAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCTAGCAGATAAAGttt                                                                            <  2:2200776/288‑1 (MQ=255)
                                                                                                                                                                                                      cctTGCTGGCTAACGACAAAAAAGGGTGATGGCTTATGCAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATAAAGttt                                                                            <  2:2656805/287‑1 (MQ=255)
                                                                                                                                                                                                       ctTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATAAAGTTTcc                                                                          >  1:620682/1‑289 (MQ=255)
                                                                                                                                                                                                        ttGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATAAAGTTTCCg                                                                         <  1:2291281/289‑1 (MQ=255)
                                                                                                                                                                                                        ttGCTGGCTAACGAAAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCca                                                                                         <  2:2425703/273‑1 (MQ=255)
                                                                                                                                                                                                         tGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATAAAGTTTCCgg                                                                        <  1:493760/289‑1 (MQ=255)
                                                                                                                                                                                                                aaaCGAAAAAAAAGTGTGATGGCTTAGGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATAAAGTTTCCGGTTataat                                                                 <  2:2558883/288‑1 (MQ=255)
                                                                                                                                                                                                                         aaaaGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATAAAGTTTCCGGTTATAATAACTTCTAt                                                        <  2:1436746/289‑1 (MQ=255)
                                                                                                                                                                                                                                tgATGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCa                                                                                                                                                                                                                                              <  2:1686388/100‑1 (MQ=255)
                                                                                                                                                                                                                                   tGGCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATAAAGTTTCCGGTTATAATAACTTCTATGAATTCgg                                                >  1:2624486/1‑287 (MQ=255)
                                                                                                                                                                                                                                     gCTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGTGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATAAAGTTTCCGGTTATAATAACTTCTATGAATTCggg                                               <  1:2538255/286‑1 (MQ=255)
                                                                                                                                                                                                                                      cTTATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCCGATAAAGTTTCCGGTTATAATAACTTCTATGAATTCGGGCTgg                                           >  2:2252344/1‑289 (MQ=255)
                                                                                                                                                                                                                                        tATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATAAAGTTTCCGGTTATAATAACTTCTATGAATTCGGGCTGGAt                                         <  1:2383091/289‑1 (MQ=255)
                                                                                                                                                                                                                                        tATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATAAAGTTTCCGGTTATAATAACTTCTATGAATTCGGGCTGGAt                                         <  2:1617826/289‑1 (MQ=255)
                                                                                                                                                                                                                                          tGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATAAAGTTTCCGGTTATAATAACTTCTa                                                         <  2:2686941/271‑1 (MQ=255)
                                                                                                                                                                                                                                          tGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATAAAGTTTCCGGTTATAATAACTTCTa                                                         >  1:2686941/1‑271 (MQ=255)
                                                                                                                                                                                                                                               aaGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATAAAGTTGCCGGTTATAATAACTTCTATGAATTCGGGCTGGATAAAGCCg                                  >  2:2434596/1‑289 (MQ=255)
                                                                                                                                                                                                                                                aGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGc                                                                                                                <  2:2162821/210‑1 (MQ=255)
                                                                                                                                                                                                                                                   tctaaTTTTAAAAGGAATCAGATGTTACGGCCGGGTCGG‑TATTCTTTATGACGCGTGGGCAGGTTTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATAAAGTTTCCGGTTATAATAACTTCTATGAATTCGGGCTGGATAAAGCCGATcc                              <  2:2484098/286‑1 (MQ=255)
                                                                                                                                                                                                                                                    tCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTg                                                                                                     <  2:1388049/217‑1 (MQ=255)
                                                                                                                                                                                                                                                                    tcagATGTTACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATAAAGTTTCCGGTTATAATAACTTCTATGAATTCGGGCTGGATAAAGCCGATCCCGCCGCTAATGCTGGTa             <  1:1292155/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                            tACGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATAAAGTTTCCGGTTATAATAACTTCTATGAATTCGGGCTGGATa                                        >  1:1655241/1‑254 (MQ=255)
                                                                                                                                                                                                                                                                             aCGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATAAAGTTTCCGGTTATAATAACTTCTATGAATTCGGGCTGGATAAAGCCGATCCCGCCGCTAATGCTGGTAGCCTGaaa     >  1:1072890/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                             aCGGCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGCTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGCGTTCAGCACGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATAAAGTTACCGGTTATAATAACTTCTATGAATTCGGGCTGGATAAAGCCGACCCCGCCGCTAATGCTGACAGCCTGaca     >  2:1630956/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                               ggCCGAGTCGG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATAAAGTTTCCGGTTATAATAACTTCTATGAATTCGGGCTGGATAAAGCCGATCCCGCCGCTAATGCTGGTAGCCTGAAAAcc  <  2:856080/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                        
AACAAAATCTTGAAAGTTTCTTCCCTGAGATCCCCGTTGAATTTCATATTAATAAAGTGAACGAGCATTATCATGTGCCTTTATTACTTAGCCAATATGGGTATAGTACCTATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAACGACAAAAAAGTGTGATGGCTTATGAAAAAGAATCAATTTTTAAAAGAAAGTGATGTTACGGCCGAGAGCG‑TATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATAAAGTTTCCGGTTATAATAACTTCTATGAATTCGGGCTGGATAAAGCCGATCCCGCCGCTAATGCTGGTAGCCTGAAAACC  >  CP042583/1676768‑1677327

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A