Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F1 I2 R1 772 77.0 3769570 91.6% 3452926 105.3

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,755,416 (T)6→5 coding (1096/1539 nt) aldB ← aldehyde dehydrogenase B

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,755,4110T.100.0% 234.6 / NA 58coding (1101/1539 nt)aldBaldehyde dehydrogenase B
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base . (30/28);  total (30/28)

CACCGGGCCAAAAATCTCCTCCTGGAACACCCGCATATTGTTCTGACCAAACAGAATCGTCGGTTCGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTCTTTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCGAGCGGGTTACCGCTACGAATGCTTTCGACACGGCGGATGGCGCGTT  >  NC_000913/3755273‑3755538
                                                                                                                                          |                                                                                                                               
cACCGGGCCAAAAATCTCCTCCTGGAACACCCGCATATTGTTCTGACCAAACAGAATCGTCGGTTCGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCctct                                                                                                                                 >  2:233971/1‑139 (MQ=255)
    gggCCAAAAATCTCCTCCTGGAACACCCGCATATTGTTCTGACCAAACAGAATCGTCGGTTCGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTCttttt                                                                                                                             >  2:894728/1‑139 (MQ=255)
    gggCCAAAAATCTCCTCCTGGAACACCCGCATATTGTTCTGACCAAACAGAATCGTCGGTTCGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTCttttt                                                                                                                             >  1:745963/1‑139 (MQ=255)
    gggCCAAAAATCTCCTCCTGGAACACCCGCATATTGTTCTGACCAAACAGAATCGTCGGTTCGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTCttttt                                                                                                                             >  1:188874/1‑139 (MQ=255)
       ccAAAAATCTCCTCCTGGAACACCCGCATATTGTTCTGACCAAACAGAATCGTCGGTTCGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTCtttttacc                                                                                                                          <  1:894728/139‑4 (MQ=255)
       ccAAAAATCTCCTCCTGGAACACCCGCATATTGTTCTGACCAAACAGAATCGTCGGTTCGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTCtttttacc                                                                                                                          <  2:400657/139‑4 (MQ=255)
         aaaaaTCTCCTCCTGGAACACCCGCATATTGTTCTGACCAAACAGAATCGTCGGTTCGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGa                                                                                                                       <  2:712737/139‑1 (MQ=255)
         aaaaaTCTCCTCCTGGAACACCCGCATATTGTTCTGACCAAACAGAATCGTCGGTTCGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGa                                                                                                                       <  1:233971/139‑1 (MQ=255)
          aaaaTCTCCTCCTGGAACACCCGCATATTGTTCTGACCAAACAGAATCGTCGGTTCGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGat                                                                                                                      <  1:1176105/139‑1 (MQ=255)
                          acacCCGCATATTGTTCTGACCAAACAGAATCGTCGGTTCGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAgg                                                                                                      <  2:69087/139‑1 (MQ=255)
                              ccGCATATTGTTCTGACCAAACAGAATCGTCGGTTCGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATgg                                                                                                  >  1:72070/1‑139 (MQ=255)
                               cGCATATTGTTCTGACCAAACAGAATCGTCGGTTCGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAgg                                                                                                      >  2:1332072/1‑134 (MQ=255)
                               cGCATATTGTTCTGACCAAACAGAATCGTCGGTTCGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTCAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAgg                                                                                                      <  1:1332072/134‑1 (MQ=255)
                                   tatTGTTCTGACCAAACAGAATCGTCGGTTCGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTcc                                                                                             >  2:1742844/1‑139 (MQ=255)
                                      tGTTCTGACCAAACAGAATCGTCGGTTCGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGatat                                                                                                                    <  2:181975/113‑1 (MQ=255)
                                      tGTTCTGACCAAACAGAATCGTCGGTTCGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGatat                                                                                                                    >  1:181975/1‑113 (MQ=255)
                                        ttCTGACCAAACAGAATCGTCGGTTCGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAAt                                                                                                                <  2:580259/115‑1 (MQ=255)
                                        ttCTGACCAAACAGAATCGTCGGTTCGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAAt                                                                                                                >  1:580259/1‑115 (MQ=255)
                                          cTGACCAAACAGAATCGTCGGTTCGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGcc                                                                                      <  2:1150920/139‑1 (MQ=255)
                                             aCCAAACAGAATCGTCGGTTCGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTCtttttacc                                                                                                                          >  2:356592/1‑98 (MQ=255)
                                             aCCAAACAGAATCGTCGGTTCGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTCtttttacc                                                                                                                          <  1:356592/101‑4 (MQ=255)
                                                  aCAGAATCGTCGGTTCGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTCtttttac                                                                                                                           <  1:130739/95‑3 (MQ=255)
                                                  aCAGAATCGTCGGTTCGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTCtttttac                                                                                                                           >  2:130739/1‑93 (MQ=255)
                                                  aCAGAATCGTCGGTTCGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGATGAGGATGGTTTCCAGTTGCCCGTGAGaa                                                                              >  1:42622/1‑139 (MQ=255)
                                                   cAGAATCGTCGGTTCGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGaaa                                                                             <  2:701780/139‑1 (MQ=255)
                                                                tCGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTT‑‑‑‑GTGAGAAACCTGCGCGCCCATTTGc                                                            >  2:726921/1‑139 (MQ=255)
                                                                 cGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTT‑‑‑‑GTGAGAAACCTGCGCGCCCATTTGCg                                                           <  1:726921/139‑1 (MQ=255)
                                                                         tagCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTCtttttac                                                                                                                           <  1:449799/72‑3 (MQ=255)
                                                                         tagCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTCtttttac                                                                                                                           >  2:449799/1‑70 (MQ=255)
                                                                              gTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGGGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGt                                                  >  2:751191/1‑139 (MQ=255)
                                                                              gTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGt                                                  >  2:260018/1‑139 (MQ=255)
                                                                                cTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAAt                                                                                                                >  1:437794/1‑75 (MQ=255)
                                                                                cTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAAt                                                                                                                <  2:437794/75‑1 (MQ=255)
                                                                                cTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAgg                                                                                                      <  2:396577/85‑1 (MQ=255)
                                                                                cTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAgg                                                                                                      >  1:396577/1‑85 (MQ=255)
                                                                                cTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCg                                                >  1:1305905/1‑139 (MQ=255)
                                                                                cTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCg                                                >  2:379182/1‑139 (MQ=255)
                                                                                 tttCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCGa                                               >  2:635896/1‑139 (MQ=255)
                                                                                  ttCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCGAg                                              <  1:379182/139‑1 (MQ=255)
                                                                                   tCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCGAGc                                             >  2:1233663/1‑139 (MQ=255)
                                                                                       ttCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCGAGCGGGt                                         <  2:953696/139‑1 (MQ=255)
                                                                                           ccTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCGAGCGGGTTAcc                                     <  2:1718879/139‑1 (MQ=255)
                                                                                              tCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCGAg                                              >  1:248419/1‑127 (MQ=255)
                                                                                              tCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCGAg                                              <  2:248419/127‑1 (MQ=255)
                                                                                                  gcagcTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGatat                                                                                                                    >  1:217903/1‑53 (MQ=255)
                                                                                                  gcagcTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGatat                                                                                                                    <  2:217903/53‑1 (MQ=255)
                                                                                                        tGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAgg                                                                                                      <  1:1408429/61‑1 (MQ=255)
                                                                                                        tGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAgg                                                                                                      >  2:1408429/1‑61 (MQ=255)
                                                                                                        tGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTc                                                         >  1:40019/1‑106 (MQ=255)
                                                                                                        tGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTc                                                         <  2:40019/106‑1 (MQ=255)
                                                                                                        tGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCGAGCGGGTTACCGCTACGAATGCtt                        >  1:1460751/1‑139 (MQ=255)
                                                                                                        tGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCGAGCGGGTTACCGCTACGAATGCtt                        >  1:825628/1‑139 (MQ=255)
                                                                                                        tGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCGAGCGGGTTACCGCTACGAATGCtt                        >  2:1821625/1‑139 (MQ=255)
                                                                                                         gcgcCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCa                                                        <  2:1880135/106‑1 (MQ=255)
                                                                                                         gcgcCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCa                                                        >  1:1880135/1‑106 (MQ=255)
                                                                                                         gcgcCGCCCGCCTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCGAGCGGGTTACCGCTACGAATGCttt                       >  2:301346/1‑139 (MQ=255)
                                                                                                             cgcccgtcTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCGAGCGGGTTACCGCTACGAATGCTTTCGac                   <  2:1661560/139‑1 (MQ=255)
                                                                                                               cccgccTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCGAGCGGGTTACCGCTACGAATGCTTTCGacac                 <  2:1460751/139‑1 (MQ=255)
                                                                                                                ccgccTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCGAGCGGGTTACCGCTACGAATGCTTTCGac                   >  2:1448799/1‑136 (MQ=255)
                                                                                                                ccgccTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCGAGCGGGTTACCGCTACGAATGCTTTCGac                   <  1:1448799/136‑1 (MQ=255)
                                                                                                                ccgccTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCGAGCGGGTTACCGCTACGAATGCTTTCGACAcg                <  2:825628/139‑1 (MQ=255)
                                                                                                                   ccTGTGAGCACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCGAGCGGGTTACCGCTACGAATGCTTTCGACAcggcg             >  2:1640286/1‑139 (MQ=255)
                                                                                                                           cACGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCGAGCGGGTTACCGCTACGAATGCTTTCGACACGGCGGATGgcgc     <  1:1821625/139‑1 (MQ=255)
                                                                                                                            aCGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCGAGCGGGTTACCGCTACGAATGCTTTCGACACGGCGGATGGcgcg    <  1:635896/139‑1 (MQ=255)
                                                                                                                            aCGTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCGAGCGGGTTACCGCTACGAATGCTTTCGACACGGCGGATGGcgcg    <  1:1640286/139‑1 (MQ=255)
                                                                                                                              gTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCGAGCGGGTTACCGCTACGAATGCTTTCGACACGGCGGATGGCGCGtt  >  1:1081420/1‑139 (MQ=255)
                                                                                                                              gTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCGAGCGGGTTACCGCTACGAATGCTTTCGACACGGCGGATGGCGCGtt  >  2:315596/1‑139 (MQ=255)
                                                                                                                              gTCAGCGCCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCGAGCGGGTTACCGCTACGAATGCTTTCGACACGGCGGATGGCGCGtt  >  2:1853053/1‑139 (MQ=255)
                                                                                                                                   cgcCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCGAGCGGGTTACCGCTACGAAt                            >  1:1697537/1‑108 (MQ=255)
                                                                                                                                   cgcCCTC‑TTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCGAGCGGGTTACCGCTACGAAt                            <  2:1697537/108‑1 (MQ=255)
                                                                                                                                          |                                                                                                                               
CACCGGGCCAAAAATCTCCTCCTGGAACACCCGCATATTGTTCTGACCAAACAGAATCGTCGGTTCGAGGTAGTAGCCGTCTTTCAGTTCACCTTCCAGCAGCTTGCGCCGCCCGCCTGTGAGCACGTCAGCGCCCTCTTTTTTACCGATATCAATGTAGTTGAGGATGGTTTCCAGTTGCCCGTGAGAAACCTGCGCGCCCATTTGCGTCACGCTGTCGAGCGGGTTACCGCTACGAATGCTTTCGACACGGCGGATGGCGCGTT  >  NC_000913/3755273‑3755538

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A