Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F28 I1 R1
|
169 |
80.7 |
2736954 |
99.0% |
2709584 |
138.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,839,566 |
A→G |
L143P (CTT→CCT) |
nlpA ← |
lipoprotein‑28 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,839,566 | 0 | A | G | 100.0%
| 236.8
/ NA
| 65 | L143P (CTT→CCT) | nlpA | lipoprotein‑28 |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (37/28); total (37/28) |
CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAA‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCC > NC_000913/3839433‑3839700
|
cTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTgg > 2:44700/1‑140 (MQ=255)
cccccTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTggtcggg < 1:44700/140‑1 (MQ=255)
cccccTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTggtcggg < 2:918190/140‑1 (MQ=255)
cTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGt < 2:734344/140‑1 (MQ=255)
cTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGt > 1:1314801/1‑140 (MQ=255)
gTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTgggg < 1:54390/140‑1 (MQ=255)
gTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTgggg < 1:1141661/140‑1 (MQ=255)
gTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTgggg < 2:1147038/140‑1 (MQ=255)
tCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACt < 1:1153172/140‑1 (MQ=255)
tGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCa < 1:1294465/136‑1 (MQ=255)
tGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCa > 2:1294465/1‑136 (MQ=255)
aaTGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTcgcg < 1:890039/140‑1 (MQ=255)
aaTGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTcgcg < 1:87130/140‑1 (MQ=255)
aTGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCCTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCgcgc < 1:1238227/140‑1 (MQ=255)
aCGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCctt < 2:1268862/140‑1 (MQ=255)
ggATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTcgcg > 1:1252681/1‑132 (MQ=255)
ggATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTcgcg < 2:1252681/132‑1 (MQ=255)
ggATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCgcgc > 1:1154116/1‑133 (MQ=255)
ggATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCgcgc < 2:1154116/133‑1 (MQ=255)
tCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTg > 2:185895/1‑140 (MQ=255)
atatCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCAc > 2:858959/1‑140 (MQ=255)
tatCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCa < 2:1206528/138‑1 (MQ=255)
tatCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCa > 1:1206528/1‑138 (MQ=255)
cgcgGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGa > 1:719307/1‑140 (MQ=255)
cgcgGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGa > 2:1117911/1‑140 (MQ=255)
cgcgGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGa > 1:111916/1‑140 (MQ=255)
cgGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGAtt > 1:877397/1‑140 (MQ=255)
gtaggtaATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGAtttt > 1:1129637/1‑140 (MQ=255)
gtaggtaATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGAtttt > 1:334039/1‑140 (MQ=255)
taggtaATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGAttttt < 2:111916/140‑1 (MQ=255)
aataaCCCTTTTCCCTCTTTCAGAGCAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGa > 1:1335919/1‑140 (MQ=255)
ccccTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTTTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATaa < 2:1338803/139‑1 (MQ=255)
cccTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAAc > 2:899519/1‑140 (MQ=255)
cccTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAAc < 1:185895/140‑1 (MQ=255)
cccTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAAc < 2:1087524/140‑1 (MQ=255)
cccTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAAc > 1:99688/1‑140 (MQ=255)
ccTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAAcc < 2:1129637/140‑1 (MQ=255)
ccTTTCCCCTTTTTCAGAGTAATTAGCTTCTTTTTTTGCAACAGTAAAGGGGCGCGCCCAG‑GGTTGGTGGGGTCGTTGGGGATCGCCACTGTCGCGCCTTTTTTTATTTGCCCCACGGTTTTGATTTTTTTGGAATAAcc < 2:334039/140‑1 (MQ=255)
cTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAAccc > 1:489644/1‑140 (MQ=255)
tttCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGc > 2:915974/1‑140 (MQ=255)
tCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCa < 1:440645/140‑1 (MQ=255)
ccTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCGG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATa < 2:1106865/140‑1 (MQ=255)
tctTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAgg > 2:600887/1‑140 (MQ=255)
ctTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAggg > 1:71407/1‑140 (MQ=255)
ctTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAggg > 2:407017/1‑140 (MQ=255)
cAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGa > 2:535470/1‑140 (MQ=255)
cAGAGAAATGACCTTCTCTTTTTGCAAGATAAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTGGGGGATCCCCACTGCCGCGCTTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAGCCCGCCATAGGGAAGa < 2:489644/140‑1 (MQ=255)
aTTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGt > 1:263269/1‑140 (MQ=255)
aTTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGt > 1:186709/1‑140 (MQ=255)
aTTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGt > 1:285622/1‑140 (MQ=255)
ttAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTa > 2:1354796/1‑140 (MQ=255)
cTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTc < 1:407017/140‑1 (MQ=255)
tctcTTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTccc > 1:739651/1‑140 (MQ=255)
ctctTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGaa < 1:243669/123‑1 (MQ=255)
ctctTTTTGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGaa > 2:243669/1‑123 (MQ=255)
tGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTAc < 1:535470/140‑1 (MQ=255)
tGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTAc < 2:739651/140‑1 (MQ=255)
tGCAACAGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTAc < 2:380491/140‑1 (MQ=255)
ggaaacatAAAAGGGCGGGGCCAAGGGTTGGTGGGGTGGTGGGGGTTGGCCCCTGTGGCGCTTTTTTTTATTTGCGCCGCGTTTTTGTTTTTTTTGAAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTAc < 2:1335919/133‑1 (MQ=255)
aaaCAGTAAAAGTGCGCGACCGG‑GGTTGGTCGGGTCGTTGGGGATCCCCACTGTCGCGCCTTCTTTTATTTGCGCCCCGGTTTTGATTTTTTTGAAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCa < 2:263269/139‑1 (MQ=255)
aGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGTCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTAc > 2:1215715/1‑134 (MQ=255)
aGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTAc < 1:608315/134‑1 (MQ=255)
aGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTAc < 1:1215715/134‑1 (MQ=255)
aGTAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTAc > 2:608315/1‑134 (MQ=255)
tAAAAGTGCGCGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTtat > 1:211956/1‑140 (MQ=255)
aGTGCGCGACCGG‑GGTTGGTGGGGTCGTTGGGGACCGCCACTGCCGCCCTTTCTTTTATTTGCGCCACGGTTTTAATTTTTTTGAAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAAcc < 2:877397/140‑1 (MQ=255)
gcgcGACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATg < 1:600887/140‑1 (MQ=255)
cgcgACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTAc < 1:88574/124‑1 (MQ=255)
cgcgACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTAc > 2:88574/1‑124 (MQ=255)
cgcgACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATgc > 2:850097/1‑140 (MQ=255)
gcgACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACATATTTCCCACCGCTACCAGTTTATAACCATgcg > 1:1269944/1‑140 (MQ=255)
cgACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATgcgc > 1:159856/1‑140 (MQ=255)
cgACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATgcgc > 2:878121/1‑140 (MQ=255)
gACCAG‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGcc < 1:892452/140‑1 (MQ=255)
|
CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAA‑GGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCC > NC_000913/3839433‑3839700
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
