Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F28 I1 R1 116 49.4 1663006 99.2% 1649701 139.1

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,794,338 G→A A118T (GCC→ACC)  rfaD → ADP‑L‑glycero‑D‑mannoheptose 6‑epimerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,794,3380GA100.0% 240.8 / NA 68A118T (GCC→ACC) rfaDADP‑L‑glycero‑D‑mannoheptose 6‑epimerase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (31/37);  total (31/37)

CGCGTGCTCTTCCACCACCGAGTGGGACGGCAAGTATATGATGGATAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGT  >  NC_000913/3794214‑3794474
                                                                                                                            |                                                                                                                                        
cgcgTGCTCTTCCACCACCGAGTGGGACGGCAAGTATATGATGGATAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCt                                                                                                                                    <  2:195983/131‑1 (MQ=255)
cgcgTGCTCTTCCACCACCGAGTGGGACGGCAAGTATATGATGGATAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCt                                                                                                                                    >  1:195983/1‑131 (MQ=255)
          tCCACCACCGAGTGGGACGGCAAGTATATGATGGATAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGa                                                                                                                 <  1:581050/140‑1 (MQ=255)
               caccGAGTGGGACGGCAAGTATATGATGGATAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTa                                                                                                            <  2:65975/140‑1 (MQ=255)
                 ccGAGTGGGACGGCAAGTATATGATGGATAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTAtt                                                                                                          >  2:374547/1‑140 (MQ=255)
                 ccGAGTGGGACGGCAAGTATATGATGGATAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTAtt                                                                                                          >  2:447947/1‑140 (MQ=255)
                 ccGAGTGGGACGGCAAGTATATGATGGATAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTAtt                                                                                                          >  1:782994/1‑140 (MQ=255)
                    aGTGGGACGGCAAGTATATGATGGATAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGaa                                                                                                       >  2:341132/1‑140 (MQ=255)
                     gTGGGACGGCAAGTATATGATGGATAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAAt                                                                                                      >  2:731117/1‑140 (MQ=255)
                          aCGGCAAGTATATGATGGATAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACAACCTACGGCGGACGCACCTCCGACTTTATTGAATCCcgc                                                                                                 <  1:230796/140‑1 (MQ=255)
                               aaGTATATGATGGATAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTa                                                                                            <  1:176814/140‑1 (MQ=255)
                                    tatGATGGATAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGaaa                                                                                       <  2:817297/140‑1 (MQ=255)
                                     atgatgGATAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGaaaa                                                                                      <  1:425482/140‑1 (MQ=255)
                                     atgatgGATAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGaaaa                                                                                      <  1:588320/140‑1 (MQ=255)
                                        atgGATAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAAcc                                                                                   >  2:488470/1‑140 (MQ=255)
                                            aTAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTg                                                                               >  2:443154/1‑140 (MQ=255)
                                            aTAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTg                                                                               >  2:460872/1‑140 (MQ=255)
                                            aTAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTg                                                                               >  1:482612/1‑140 (MQ=255)
                                            aTAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTg                                                                               >  2:580015/1‑140 (MQ=255)
                                            aTAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACG‑‑GGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGaa                                                                             >  2:81343/1‑140 (MQ=255)
                                             tAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGa                                                                              <  1:447947/140‑1 (MQ=255)
                                             tAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGa                                                                              <  1:443154/140‑1 (MQ=255)
                                             tAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGa                                                                              <  1:472011/140‑1 (MQ=255)
                                             tAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGa                                                                              <  1:783802/140‑1 (MQ=255)
                                             tAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGa                                                                              <  2:297727/140‑1 (MQ=255)
                                             tAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGa                                                                              <  1:496542/140‑1 (MQ=255)
                                             tAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGa                                                                              <  1:536347/140‑1 (MQ=255)
                                              aacaacTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGaa                                                                             <  2:782994/140‑1 (MQ=255)
                                                  acTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTc                                                                         <  1:397879/140‑1 (MQ=255)
                                                    tATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTa                                                                       <  1:374547/140‑1 (MQ=255)
                                                     aTCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTg                                                                               <  2:188341/131‑1 (MQ=255)
                                                     aTCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTg                                                                               >  1:188341/1‑131 (MQ=255)
                                                      tCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACg                                                                     >  2:154629/1‑140 (MQ=255)
                                                        aaTACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGt                                                                   <  1:357853/140‑1 (MQ=255)
                                                         aTACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGtt                                                                  <  2:657829/140‑1 (MQ=255)
                                                             tCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTc                                                              >  1:453701/1‑140 (MQ=255)
                                                              ccAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCa                                                             >  1:43143/1‑140 (MQ=255)
                                                                aaGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCaaa                                                           >  2:94051/1‑140 (MQ=255)
                                                                aaGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCaaa                                                           >  1:23475/1‑140 (MQ=255)
                                                                aaGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCaaa                                                           >  1:550277/1‑140 (MQ=255)
                                                                  ggAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAAt                                                         >  1:228260/1‑140 (MQ=255)
                                                                    aGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTc                                                       >  2:42849/1‑140 (MQ=255)
                                                                    aGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTc                                                       >  2:443217/1‑140 (MQ=255)
                                                                      ctgctgCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCt                                                     >  2:582200/1‑140 (MQ=255)
                                                                      ctgctgCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCt                                                     >  2:398717/1‑140 (MQ=255)
                                                                       tgctgcACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCt                                                     >  2:489002/1‑139 (MQ=255)
                                                                       tgctgcACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCt                                                     <  1:489002/139‑1 (MQ=255)
                                                                       tgctgcACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTg                                                    >  1:276931/1‑140 (MQ=255)
                                                                       tgctgcACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTg                                                    <  1:488470/140‑1 (MQ=255)
                                                                        gctgcACTACTGCCTGGAGCGAGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGt                                                   >  2:588618/1‑140 (MQ=255)
                                                                         ctgcACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGtt                                                  <  1:24327/140‑1 (MQ=255)
                                                                         ctgcACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGtt                                                  <  1:94051/140‑1 (MQ=255)
                                                                         ctgcACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGtt                                                  <  1:443217/140‑1 (MQ=255)
                                                                           gcACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTtg                                                <  1:460872/140‑1 (MQ=255)
                                                                           gcACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTtg                                                <  1:341132/140‑1 (MQ=255)
                                                                                    ccTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATg                                       <  2:474863/140‑1 (MQ=255)
                                                                                    ccTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATg                                       <  1:580015/140‑1 (MQ=255)
                                                                                        gAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCg                                   >  2:183183/1‑140 (MQ=255)
                                                                                              gAAATCCCGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAAt                             <  1:155594/140‑1 (MQ=255)
                                                                                                   cccGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATcctgc                        <  2:276931/140‑1 (MQ=255)
                                                                                                     cGTTCCTGTACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATcctgcct                      >  2:701041/1‑140 (MQ=255)
                                                                                                             tACGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGaa              <  1:582200/140‑1 (MQ=255)
                                                                                                              aCGCTTCTTCCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAAc             <  2:396914/140‑1 (MQ=255)
                                                                                                                    cttcCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAg       >  1:440072/1‑140 (MQ=255)
                                                                                                                    cttcCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAg       <  2:228260/140‑1 (MQ=255)
                                                                                                                     ttcCGCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGa      >  2:585228/1‑140 (MQ=255)
                                                                                                                         gCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGAttgt  <  2:632914/140‑1 (MQ=255)
                                                                                                                         gCAACCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGAttgt  <  2:482612/140‑1 (MQ=255)
                                                                                                                            |                                                                                                                                        
CGCGTGCTCTTCCACCACCGAGTGGGACGGCAAGTATATGATGGATAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGT  >  NC_000913/3794214‑3794474

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A