Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F28 I1 R1
|
143 |
98.3 |
3330986 |
99.3% |
3307669 |
138.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,967,608 |
C→T |
G298G (GGG→GGA) |
cheB ← |
protein‑glutamate methylesterase/protein glutamine deamidase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,967,608 | 0 | C | T | 100.0%
| 180.9
/ NA
| 54 | G298G (GGG→GGA) | cheB | protein‑glutamate methylesterase/protein glutamine deamidase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (40/14); total (40/14) |
ACTAATTTTTGCCAACATTTGCTGGCTTACCTGGCTAAGATCGACCACTTCGCAGACACCACCCATATTGATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCCCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATGGAACAACACATCTACCGAAGGCCGATGACGG > NC_000913/1967476‑1967740
|
aCTAATTTTTGCCAACATTTGCTGGCTTACCTGGCTAAGATCGACCACTTCGCAGACACCACCCATATTGATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCt > 1:1327651/1‑140 (MQ=255)
aTTTTTGCCAACATTTGCTGGCTTACCTGGCTAAGATCGACCACTTCGCAGACACCACCCATATTGATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACg > 1:463091/1‑140 (MQ=255)
tttGCCAACATTTGCTGGCTTACCTGGCTAAGATCGACCACTTCGCAGACACCACCCATATTGATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCAt < 1:1205981/140‑1 (MQ=255)
tttGCCAACATTTGCTGGCTTACCTGGCTAAGATCGACCACTTCGCAGACACCACCCATATTGATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCAt < 1:348115/140‑1 (MQ=255)
tGCCAACATTTGCTGGCTTACCTGGCTAAGATCGACCACTTCGCAGACACCACCCATATTGATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCg > 1:1498343/1‑140 (MQ=255)
ccAACATTTGCTGGCTTACCTGGCTAAGATCGACCACTTCGCAGACACCACCCATATTGATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGcc < 1:434143/140‑1 (MQ=255)
cTTACCTGGCTAAGATCGACCACTTCGCAGACACCACCCATATTGATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCcgccgc > 1:709545/1‑140 (MQ=255)
ttACCTGGCTAAGATCGACCACTTCGCAGACACCACCCATATTGATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCcgccgcg > 1:1144960/1‑140 (MQ=255)
ttACCTGGCTAAGATCGACCACTTCGCAGACACCACCCATATTGATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCcgccgcg > 1:1519511/1‑140 (MQ=255)
cTAAGATCGACCACTTCGCAGACACCACCCATATTGATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGtt > 2:1616995/1‑140 (MQ=255)
cTAAGATCGACCACTTCGCAGACACCA‑CCATATTGATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCACCAACA‑TTCCCGCCGCGCCGTCGTTg > 2:1577692/1‑140 (MQ=255)
aTCGACCACTTCGCAGACACCACCCATATTGATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCcgccgcg < 2:858766/127‑1 (MQ=255)
aTCGACCACTTCGCAGACACCACCCATATTGATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCcgccgcg > 1:858766/1‑127 (MQ=255)
ggACCACTTCGCAGACACCACCCATATGGAGGGCCTCGCGCGGCATGCCGAACACCACCCAACTTGCTTCTTTTTGCGAAAGGGTCCATGCTCCCGCCTGCCGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATa < 2:189069/139‑1 (MQ=255)
agacagcTTCGCAGACACCCCCAATATTGATGGCCTCGCGCGGCATGCCGAACACCACGAAACTTGCTTCGTTTTGCGCAAGGCTCCATGCTCCCGCCTGACGCACCGCCAACA‑TCCCCGCCGCGCCGTCGTTGCCCATa < 2:1402063/134‑1 (MQ=255)
aCCACTTCGCAGACACCATCCATATTGATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATAcc > 1:1114056/1‑140 (MQ=255)
aCCACTTCGCAGACACCACCCATATTGATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATAcc > 1:1648951/1‑140 (MQ=255)
aCCACTTCGCAGACACCACCCATATTGATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATAcc > 2:257436/1‑140 (MQ=255)
aCCACTTCGCAGACACCACCCATATTGATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATAcc > 1:252615/1‑140 (MQ=255)
aCCACTTCGCAGACACCACCCATATTGATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATAcc > 1:1317754/1‑140 (MQ=255)
cACTTCGCAGACACCATCCATATTGATGGCCTCGCGCGGCATGCCGAACCCCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCgg < 2:1114056/140‑1 (MQ=255)
cttcagaGACACCACCCATATGCGTGGCCCCGCGCGACAAGCGCAACTCCCGACGGCTTTCTTCGTTTTGCGCGAGGTTCCTGGCTCGCTCCTCACTCA‑GGCCTACAGTGCCCGCCGCGCCGTCGTTGCCCATACCGTTc < 2:691069/134‑1 (MQ=255)
ttCGCAGACACCACCCATATTGATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCa > 2:1384447/1‑140 (MQ=255)
cGCAGACACCACCCATATTGATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAgg < 1:739092/140‑1 (MQ=255)
acacCACCCATATTGATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCAc < 1:257436/140‑1 (MQ=255)
ccaccCATATTGATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGATTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATctgtct > 1:1402063/1‑135 (MQ=255)
ccATATTGATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAAcc > 2:1367986/1‑140 (MQ=255)
ccATATTGATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAAcc > 2:149281/1‑140 (MQ=255)
cATATTGATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCg < 1:1367986/140‑1 (MQ=255)
gATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTAc > 1:318392/1‑140 (MQ=255)
gATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTAc > 1:76783/1‑140 (MQ=255)
gATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTAc > 1:819021/1‑140 (MQ=255)
gATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTAc > 2:690794/1‑140 (MQ=255)
gtgcccTCGCGCGGCATGCCGAACCCCACGCAACTTGCTTCGTTTTGCGCAGGGGTCCATGCCCCCGCCTGACGCATCGCCAACA‑TCCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACg < 2:1144960/136‑1 (MQ=255)
ggCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGcc > 2:163749/1‑140 (MQ=255)
ggCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGcc > 1:692736/1‑140 (MQ=255)
ggCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGcc > 1:680327/1‑140 (MQ=255)
ggCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCACCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGcc > 1:858130/1‑140 (MQ=255)
ccccgcgcgGCATGCCGAACCCCCCGCAACTTGCTTCGTTTTGCGCAGGGGCCCATGCCCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGcccc < 2:1317754/137‑1 (MQ=255)
ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGcccc > 1:264138/1‑140 (MQ=255)
cTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCg > 1:1055274/1‑140 (MQ=255)
cTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCg > 2:873521/1‑140 (MQ=255)
acacccGAACCCCACGCAATTTCCTTCTTTTTGCGCAAGGGCCCTTCCCCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTgg < 2:202122/136‑1 (MQ=255)
aTGCCGACCCCCACGCAACTTGTTTCGTTTTGCGAAGGGGCCCATGCCCCCGCCTGACGCACCGCCAACA‑TCCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGc < 2:1055274/140‑1 (MQ=255)
gCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGa > 2:828137/1‑140 (MQ=255)
accccacGCAACTTGCTTCTTTTTGCGCAGGGGTCCATGCCCCCGCCTGACGCATCGCCAACA‑TCCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGaa < 2:692736/137‑1 (MQ=255)
acacCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCACCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGaa < 2:858130/140‑1 (MQ=255)
ccacGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATgg < 1:1384447/140‑1 (MQ=255)
cccAACTTGCTTCTTTTTCCGCAGGGGCCCATGCCCCCGCCGGCCGCACCGCAAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATGGaac < 2:960954/138‑1 (MQ=255)
cGCACCTTGCTTCTTTTTGCGCAGGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATGGaac < 2:1498343/140‑1 (MQ=255)
cGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGa > 1:1541073/1‑129 (MQ=255)
cGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGa < 2:1541073/129‑1 (MQ=255)
cGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATGGaac < 2:264138/140‑1 (MQ=255)
cGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATGGaac > 1:949128/1‑140 (MQ=255)
cGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATGGaac < 1:521742/140‑1 (MQ=255)
gCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATggctgt > 1:202122/1‑136 (MQ=255)
cAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCTTCGCCACCA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATGGaacaa < 2:1327651/140‑1 (MQ=255)
cAACTTGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATGGaacaa < 2:318392/140‑1 (MQ=255)
cAACTTCCTTCGTTTCGCGCAGGGCTCCATCCTCCCGCCTGACCAATCGCCACCA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATGGaacaa < 2:1313900/140‑1 (MQ=255)
aaCTTGTTTCTTTTGGCGAAGGGGTCCATCCCCCCGCCTGCCGCATCGCCAACT‑TCCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATGGaacaac < 2:1648951/140‑1 (MQ=255)
aaCTTGCTTCGTTTCGCGCAAGGGTCCATGCCCCCGCCTGACGCATCCCCAACA‑TCCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATGGaacaac < 2:1344128/140‑1 (MQ=255)
ttGCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATGGAACAAcaca > 1:273461/1‑140 (MQ=255)
tGCTTCGTTTTCCGCAGGGGCCCATGCCCCCGCCTGCCGCATCGCCAACA‑TCCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATGGAACAACACAt < 2:252615/140‑1 (MQ=255)
gCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATGGaac > 2:1495640/1‑132 (MQ=255)
gCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATGGaac < 1:1495640/132‑1 (MQ=255)
gCTTCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATGGAACAACACATc > 1:1344128/1‑140 (MQ=255)
ttCGTTTTGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATGGAACAACACATCTa > 2:1528561/1‑140 (MQ=255)
ttttGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATGGAACAACACATCTACCGa < 1:873521/140‑1 (MQ=255)
tGCGCAGGGGCCCATGCCCCCGCCTGACGCATCGCCAACA‑TCCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATGGAACAACACATCTACCGAAgg < 2:100879/140‑1 (MQ=255)
tGCGCAAGGGTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATGGAACAACACATCTACCGAAgg > 1:1606383/1‑140 (MQ=255)
gggTCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATGGAACAACACATCTACCGAAGGCCGATGa > 1:1105340/1‑140 (MQ=255)
tCCATGCTCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATGGAACAACACATCTACCGAAGGCCGATGACgg > 2:1406903/1‑140 (MQ=255)
|
ACTAATTTTTGCCAACATTTGCTGGCTTACCTGGCTAAGATCGACCACTTCGCAGACACCACCCATATTGATGGCCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCCCCCGCCTGACGCATCGCCAACA‑TTCCCGCCGCGCCGTCGTTGCCCATACCGGTCAGGATCACCCCAACCGCATTACGCCCCGCCTGTTTGGCGACAGAATGGAACAACACATCTACCGAAGGCCGATGACGG > NC_000913/1967476‑1967740
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
