Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A11 F28 I1 R1 228 65.7 2434974 91.7% 2232871 138.5

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,795,309 T→C Y353H (TAT→CAT)  gabP → 4‑aminobutyrate:H(+) symporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,795,3090TC100.0% 221.3 / NA 62Y353H (TAT→CAT) gabP4‑aminobutyrate:H(+) symporter
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (31/31);  total (31/31)

GCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACTATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGTTTATTTAGTCATCGCCGTTTCACAGTTGCGGATGCGCAAAATTCTGCGAGCAGAAGGAAGCGAAATTCGC  >  NC_000913/2795174‑2795443
                                                                                                                                       |                                                                                                                                      
gcgTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTa                                                                                                                                    <  1:483019/140‑1 (MQ=255)
 cgTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTAc                                                                                                                                   >  1:190583/1‑140 (MQ=255)
 cgTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTAc                                                                                                                                   >  1:254706/1‑140 (MQ=255)
   tCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTAcgc                                                                                                                                 <  1:1099642/140‑1 (MQ=255)
   tCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTAcgc                                                                                                                                 <  2:1137779/140‑1 (MQ=255)
    cAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTAcgcg                                                                                                                                >  2:153195/1‑140 (MQ=255)
     aaGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACgcgc                                                                                                                               <  1:922018/140‑1 (MQ=255)
     aaGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACgcgc                                                                                                                               <  1:909988/140‑1 (MQ=255)
           gCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTAcgc                                                                                                                                 <  2:1162694/132‑1 (MQ=255)
           gCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTAcgc                                                                                                                                 >  1:1162694/1‑132 (MQ=255)
           gCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGa                                                                                                                         <  2:772912/140‑1 (MQ=255)
           gCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGa                                                                                                                         <  1:935908/140‑1 (MQ=255)
                  tCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGa                                                                                                                         <  2:549785/133‑1 (MQ=255)
                  tCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGa                                                                                                                         >  1:549785/1‑133 (MQ=255)
                      tAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTaaa                                                                                                              >  2:998709/1‑140 (MQ=255)
                      tAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTa                                                                                                                >  2:683994/1‑138 (MQ=255)
                      tAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTa                                                                                                                <  1:683994/138‑1 (MQ=255)
                        aGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAAtt                                                                                                            >  2:315514/1‑140 (MQ=255)
                         gtcgtcGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAAttt                                                                                                           >  1:242180/1‑140 (MQ=255)
                         gtcgtcGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAAttt                                                                                                           >  1:885379/1‑140 (MQ=255)
                           cgtcgCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCt                                                                                                         >  2:92522/1‑140 (MQ=255)
                             tcgCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGa                                                                                                       >  2:390973/1‑140 (MQ=255)
                              cgcgGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGAt                                                                                                      >  1:876818/1‑140 (MQ=255)
                                       gCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTc                                                                                             >  1:567108/1‑140 (MQ=255)
                                          cccGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCgg                                                                                          <  2:190583/140‑1 (MQ=255)
                                           ccGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGgc                                                                                         >  2:411770/1‑140 (MQ=255)
                                             gcgGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGgcgc                                                                                       >  2:792295/1‑140 (MQ=255)
                                             gcgGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGgcgc                                                                                       <  1:843025/140‑1 (MQ=255)
                                               ggTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTa                                                                                     <  1:160729/140‑1 (MQ=255)
                                                  aaTGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGTGCTATCg                                                                                  <  2:204372/140‑1 (MQ=255)
                                                  aaTGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCg                                                                                  <  2:254706/140‑1 (MQ=255)
                                                     gggTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGccc                                                                               <  1:1094826/140‑1 (MQ=255)
                                                       gTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCctg                                                                             <  1:145377/140‑1 (MQ=255)
                                                       gTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCctg                                                                             <  2:192577/140‑1 (MQ=255)
                                                           aaTCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTgg                                                                         <  2:885379/140‑1 (MQ=255)
                                                           aaTCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTgg                                                                         >  1:953282/1‑140 (MQ=255)
                                                            aTCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGt                                                                        <  1:1040890/140‑1 (MQ=255)
                                                            aTCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGt                                                                        <  2:1049591/140‑1 (MQ=255)
                                                            aTCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGt                                                                        <  1:315514/140‑1 (MQ=255)
                                                             tCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGtt                                                                       <  1:532949/140‑1 (MQ=255)
                                                               aaCCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGttta                                                                     >  1:1041884/1‑140 (MQ=255)
                                                                aCCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGtttat                                                                    >  2:1007617/1‑140 (MQ=255)
                                                                   gCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGtttattta                                                                 <  1:741090/140‑1 (MQ=255)
                                                                      gTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGTTTATTTAGTc                                                              >  1:412041/1‑140 (MQ=255)
                                                                        aaaaCCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGTTTATTTAGTCAt                                                            <  2:493238/140‑1 (MQ=255)
                                                                          aaCCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGTTTATTTAGTCATCg                                                          <  2:876818/140‑1 (MQ=255)
                                                                            ccccGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGTTTATTTAGTCATCGcc                                                        >  2:274249/1‑140 (MQ=255)
                                                                                  aCGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGTTTATTTAGTCATCGCCGTTTca                                                  <  1:274249/140‑1 (MQ=255)
                                                                                  aCGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGTTTATTTAGTCATCGCCGTTTca                                                  <  1:792295/140‑1 (MQ=255)
                                                                                      ggCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGTTTATTTAGTCATCGCCGTTTCACAGt                                              >  1:25601/1‑140 (MQ=255)
                                                                                           tgtTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGTTTATTTAGTCATCGCCGTTTCACAGTTGCgg                                         >  1:1123019/1‑140 (MQ=255)
                                                                                                 tctcCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGTTTATTTAGTCATCGCCGTTTCACAGTTGCGGATgcgc                                   <  1:1064107/140‑1 (MQ=255)
                                                                                                     cACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGTTTATTTAGTCATCGCCGTTTCACAGTTGCGGATGCGCaaaa                               >  2:783262/1‑140 (MQ=255)
                                                                                                     cACCGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGTTTATTTAGTCATCGCCGTTTCACAGTTGCGGATGCGCaaaa                               >  2:468524/1‑140 (MQ=255)
                                                                                                       ccGGCGCGGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGTTTATTTAGTCATCGCCGTTTCACAGTTGCGGATGCGCAAAAtt                             >  1:1177426/1‑140 (MQ=255)
                                                                                                           cgcgGCATTCTTAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGTTTATTTAGTCATCGCCGTTTCACAGTTGCGGATGCGCAAAATTCTGc                         >  1:844943/1‑140 (MQ=255)
                                                                                                             cgGCATTCTTAACGGTGGTGGTGAACCATTGCGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGTTTATTTAGTCATCGCCGTTTCACAGTTGCGGATGCGCAAAATTCTGCGa                       >  2:402485/1‑140 (MQ=255)
                                                                                                                      tAACGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGTTTATTTAGTCATCGCCGTTTCACAGTTGCGGATGCGCAAAATTCTGCGAGCAgaagga              <  1:998709/140‑1 (MQ=255)
                                                                                                                        aCGGTGGTGGTGAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGTTTATTTAGTCATCGCCGTTTCACAGTTGCGGATGCGCAAAATTCTGCGAGCAgaaggaag            <  1:711327/140‑1 (MQ=255)
                                                                                                                              gtggtgAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGTTTATTTAGTCATCGCCGTTTCACAGTTGCGGATGCGCAAAATTCTGCGAGCAGAAGGAAGCGAAAt      >  2:619883/1‑140 (MQ=255)
                                                                                                                              gtggtgAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGTTTATTTAGTCATCGCCGTTTCACAGTTGCGGATGCGCAAAATTCTGCGAGCAGAAGGAAGCGAAAt      >  1:351502/1‑140 (MQ=255)
                                                                                                                                  tgAACCATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGTTTATTTAGTCATCGCCGTTTCACAGTTGCGGATGCGCAAAATTCTGCGAGCAGAAGGAAGCGAAATTCGc  >  1:607074/1‑140 (MQ=255)
                                                                                                                                       |                                                                                                                                      
GCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACTATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGTTTATTTAGTCATCGCCGTTTCACAGTTGCGGATGCGCAAAATTCTGCGAGCAGAAGGAAGCGAAATTCGC  >  NC_000913/2795174‑2795443

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A