Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F28 I1 R1
|
228 |
65.7 |
2434974 |
91.7% |
2232871 |
138.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,717,091 |
A→G |
D182G (GAC→GGC) |
yiaD → |
PF13488 family lipoprotein YiaD |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,717,091 | 0 | A | G | 98.4%
| 211.0
/ ‑4.3
| 64 | D182G (GAC→GGC) | yiaD | PF13488 family lipoprotein YiaD |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (24/39); minor base T (1/0); total (25/39) |
| Fisher's exact test for biased strand distribution p-value = 3.91e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 |
AAAGAGTATCCGAAAACGGCGGTTAACGTGATTGGTTATACCGACAGCACGGGTGGTCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGACGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGAT > NC_000913/3716961‑3717226
|
aaaGAGTATCCGAAAACGGCGGTTAACGTGATTGGTTATACCGACAGCACGGGTGGTCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCg < 1:1112115/140‑1 (MQ=255)
aaaGAGTATCCGAAAACGGCGGTTAACGTGATTGGTTATACCGACAGCACGGGTGGTCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCg < 2:651981/140‑1 (MQ=255)
aaaGAGTATCCGAAAACGGCGGTTAACGTGATTGGTTATACCGACAGCACGGGTGGTCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCg < 1:970213/140‑1 (MQ=255)
agagTATCCGAAAACGGCGGTTAAAGTGATTGGTTATACCGACAGCACGGGGGGGCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGGTTCCGTTGCCCGCGCGTTGATCACCCCGGGCGTGGGGGCCAGCCGcc > 2:1112115/1‑139 (MQ=255)
agTATCCGAAAACGGCGGTTAACGTGATTGGTTATACCCACAGCACGGGGGGGCACGACCTGAACATGCGTCTCTCCCCGCAACGTGCGGGTTCCGTTGCCAGCGCGTTGATCACCCAGGGCGGGGGCGCCCGCCGCATc > 2:789329/1‑140 (MQ=255)
gTATCCGAAAACGGCGGTTAACGTGATTGGTTATACCGACAGCACGGGTGGTCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATcc < 2:794671/140‑1 (MQ=255)
gTATCCGAAAACGGCGGTTAACGTGATTGGTTATACCGACAGCACGGGGGGTCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGGTTCCGTTGCCCGCGCGGTGATCACCCAGGGCGGGGGCGCCCGCCGCATcc > 2:811129/1‑140 (MQ=255)
gTATCCGAAAACGGCGGTTAACGTGATTGGTTATACCGACAGCACGGGGGGGCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTTCCCGCGCGTTGATCACCCAGGGCGGGGGCGCCAGCCGCATcc > 2:1115011/1‑140 (MQ=255)
gTATCCGAAAACGGCGGTTAACGTGATTGGGTATACCCACAACACGGGGGGGCACGACCCGAACATGCGTCTCTCCCCGCAACGCGCGGGTTTCGTTGCCCGCGCGTTGATCACCCCGGGCGGGGGCGCCCGCCGCATcc > 2:1028515/1‑140 (MQ=255)
tATCCGAAAACGGCGGTTAACGTGATTGGTTATACCGACAGCTCGGGTGGTCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGCTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCg < 2:1136604/140‑1 (MQ=255)
tCCGAAAACGGCGGTTTAAGTGATTGGTTTTACCCACAGCACGGGGGGGCACGACCTGAACAAGCGTCTCTCCCCGCAACGAGCGGATTCCGTTGCCAGCGCGTTGATCACCCACGGCGGGGACGCCCGCCGCCTCCGTa > 2:619363/1‑140 (MQ=255)
tCCGAAAACGGCGGTTAACGTGATTGGTTATACCGACAGCACGGGGGGGCACGACCTGAACAAGCGTCTCTCCCCGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCCGGGCGGGGGGGCCAGCCGCATCCGTa > 2:491485/1‑140 (MQ=255)
aaaaCGGCGGTTAACGTGATTGGTTATACCGACAGCACGGGTGGTCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCa < 1:1028515/140‑1 (MQ=255)
aaaaCGGCGGTTAACGTGATTGGTTATACCGACAGCACGGGTGGTCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCa < 1:726573/140‑1 (MQ=255)
aaaaCGGCGGTTAACGTGATTGGTTATACCGACAGCACGGGTGGTCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCa < 2:260/140‑1 (MQ=255)
cggTTAAAGTGATTGGTTATACCGACAGCACGGGGGGGCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGGTTCCGTTGCCAGCGCGGTGATCACCCAGGGCGTGGGGGCCAGCCGCCTCCGTACTCAGGGCCtt > 2:54668/1‑140 (MQ=255)
ttAACGTGATTGGTTATACCGACAGCACGGGTGGTCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGc < 1:481438/140‑1 (MQ=255)
ttAACGTGATTGGTTATACCGACAGCACGGGTGGTCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGc < 2:549527/140‑1 (MQ=255)
cGTGATTGGTTATACCGACAGCACGGGTGGTCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCgg < 2:1166884/140‑1 (MQ=255)
gATTGGTTATACCGACAGCACGGGTGGTCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTa < 2:424861/140‑1 (MQ=255)
ataCCGACAGCACGGGTGGTCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATc > 1:394571/1‑140 (MQ=255)
aCCGACAGCACGGGTGGTCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGc > 2:807881/1‑140 (MQ=255)
ccGACAGCACGGGTGGTCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGcc < 1:491485/140‑1 (MQ=255)
cGACAGCACGGGTGGTCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCa > 1:695550/1‑140 (MQ=255)
cAGCACGGGTGGTCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCa > 2:515314/1‑140 (MQ=255)
cAGCACGGGTGGTCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCa > 2:810217/1‑140 (MQ=255)
gCACGGGTGGTCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAAc < 1:1115011/140‑1 (MQ=255)
cGGGTGGTCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGc > 1:578172/1‑140 (MQ=255)
gggTGGTCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCACGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCa < 2:1064898/140‑1 (MQ=255)
ggtggtCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCAc > 1:765795/1‑140 (MQ=255)
gtggtCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCAcc < 2:765795/140‑1 (MQ=255)
tggtCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCg < 2:634679/140‑1 (MQ=255)
aCGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGaa > 1:165361/1‑140 (MQ=255)
ccTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAg < 1:371177/126‑1 (MQ=255)
ccTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAg > 2:371177/1‑126 (MQ=255)
ccTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCa > 1:398982/1‑128 (MQ=255)
ccTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCa < 2:398982/128‑1 (MQ=255)
aaCATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGgc > 1:420200/1‑140 (MQ=255)
gCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGTGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCaaa > 1:151584/1‑140 (MQ=255)
cGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCaaaa > 1:662375/1‑140 (MQ=255)
ctctcCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAAccg < 1:946875/140‑1 (MQ=255)
ctctcCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAAccg < 1:54668/140‑1 (MQ=255)
tctcCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAAccgc < 1:789329/140‑1 (MQ=255)
tctcCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAAccgc < 1:570903/140‑1 (MQ=255)
tcCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAAccgccg > 1:771309/1‑140 (MQ=255)
ccAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCgtg < 2:771309/140‑1 (MQ=255)
ccAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCgtg < 2:578172/140‑1 (MQ=255)
ccAGAAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCgtg < 2:689597/140‑1 (MQ=255)
cAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGTCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCgtgt > 1:23024/1‑140 (MQ=255)
cAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCgtgt > 2:1121295/1‑140 (MQ=255)
gCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAg < 1:811129/140‑1 (MQ=255)
cGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAAt < 1:515314/140‑1 (MQ=255)
cGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAAt < 2:662375/140‑1 (MQ=255)
gCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAAt < 1:252622/137‑1 (MQ=255)
gCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAAt > 2:252622/1‑137 (MQ=255)
gCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAAt < 2:150921/137‑1 (MQ=255)
gCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAAt > 1:150921/1‑137 (MQ=255)
gATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCtt > 2:1103290/1‑140 (MQ=255)
cGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGcc < 2:165361/140‑1 (MQ=255)
cGTTGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGcc < 1:807881/140‑1 (MQ=255)
tGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCtt > 2:953526/1‑132 (MQ=255)
tGCCAGCGCGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCtt < 1:953526/132‑1 (MQ=255)
gcgcGTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTaa > 1:920873/1‑140 (MQ=255)
cgcgTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAAt < 1:461670/140‑1 (MQ=255)
cgcgTTGATCACCCAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAAt < 2:315447/140‑1 (MQ=255)
ccAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTg < 1:27690/124‑1 (MQ=255)
ccAGGGCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTg > 2:27690/1‑124 (MQ=255)
gggCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAgg < 1:304963/140‑1 (MQ=255)
gCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTg > 2:399097/1‑140 (MQ=255)
gCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTg > 2:629722/1‑140 (MQ=255)
gCGTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTg > 2:832988/1‑140 (MQ=255)
gTGGGCGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGAt < 2:771427/140‑1 (MQ=255)
|
AAAGAGTATCCGAAAACGGCGGTTAACGTGATTGGTTATACCGACAGCACGGGTGGTCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGACGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGAT > NC_000913/3716961‑3717226
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
