Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F28 I1 R1
|
126 |
206.4 |
6980590 |
99.2% |
6924745 |
138.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,516,070 |
(T)5→6 |
coding (1237/1287 nt) |
damX ← |
cell division protein DamX |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,516,065 | 1 | . | T | 100.0%
| 800.7
/ NA
| 224 | N414K (AAC→AAA) | damX | cell division protein DamX |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base T (105/119); total (105/119) |
Only 100 of 260 total aligned reads displayed.
TACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑TTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAG > NC_000913/3515928‑3516199
|
tACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑tt > 2:1516971/1‑140 (MQ=255)
tACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑tt > 1:3149257/1‑140 (MQ=255)
tACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑tt > 1:2171557/1‑140 (MQ=255)
cacCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑tttt > 2:2123586/1‑140 (MQ=255)
acCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑ttttt > 2:137372/1‑140 (MQ=255)
cTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑ttttttg > 2:2382135/1‑138 (MQ=255)
cTTCTCCGGCTGTGGAGAAAGCCCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGTTAACCTTCATTACTTCAGATCGGCCTGTACCTTACGCAGCGGTTTCGCCCACGGG‑ctttttg > 2:2263515/1‑138 (MQ=255)
tctcCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑ttttttggc > 1:864772/1‑136 (MQ=255)
tctcCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑ttttttggc < 1:2382135/140‑5 (MQ=255)
ctcCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑ttttttggcc > 1:1125020/1‑135 (MQ=255)
ctcCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑ttttttggcc > 1:2809955/1‑135 (MQ=255)
ctcCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑ttttttggcc < 2:243864/140‑6 (MQ=255)
ctcCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑ttttttggcc > 1:1891296/1‑135 (MQ=255)
ctcCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑tttt < 2:2787937/134‑1 (MQ=255)
tcCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCt > 2:2581567/1‑140 (MQ=255)
tcCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑tttt < 2:1282883/133‑1 (MQ=255)
tcCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑tttt > 1:1282883/1‑133 (MQ=255)
ggCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGa < 2:1032205/140‑1 (MQ=255)
gtgGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATc < 2:1692814/140‑1 (MQ=255)
tgGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATct < 1:1751137/140‑1 (MQ=255)
tgGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATct > 1:3291526/1‑140 (MQ=255)
tgGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATct > 2:460337/1‑140 (MQ=255)
tgGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATct > 1:1613814/1‑140 (MQ=255)
tgGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑ttttttggcc > 2:1120519/1‑126 (MQ=255)
gaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATctgctg < 2:2771651/140‑1 (MQ=255)
gaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATctgctg < 1:2455517/140‑1 (MQ=255)
gaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATctgctg < 2:3219131/140‑1 (MQ=255)
aaGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGc < 1:214377/140‑1 (MQ=255)
cTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAt > 2:2983082/1‑140 (MQ=255)
tCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑g > 1:481139/1‑140 (MQ=255)
cATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATAcc > 1:3097701/1‑140 (MQ=255)
tCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGc > 1:1486520/1‑140 (MQ=255)
cgcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCttttt > 1:725183/1‑140 (MQ=255)
gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCtttttt > 1:3044781/1‑140 (MQ=255)
cAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGcc < 2:2171557/140‑1 (MQ=255)
ggCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCctc > 1:1045673/1‑140 (MQ=255)
ggCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCctc < 2:2461831/140‑1 (MQ=255)
cTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTcttctt > 2:2857/1‑140 (MQ=255)
tCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCttt > 2:2368800/1‑140 (MQ=255)
gCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGaa < 2:3161450/140‑1 (MQ=255)
gCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGaa < 2:3044781/140‑1 (MQ=255)
gCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGaa < 1:45613/140‑1 (MQ=255)
cAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAATGTAGTAGATACCGCTTTTTTCGCCTCTTCTTTCg < 1:2748807/140‑1 (MQ=255)
tAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTaca < 1:896516/140‑1 (MQ=255)
tAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTaca < 1:584880/140‑1 (MQ=255)
tAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTaca < 1:3449910/140‑1 (MQ=255)
ccATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGcc < 2:2035357/140‑1 (MQ=255)
ccATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGcc < 2:725183/140‑1 (MQ=255)
cATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTcttctt > 2:770579/1‑123 (MQ=255)
cATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTcttctt < 1:770579/123‑1 (MQ=255)
cATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCa < 1:356808/140‑1 (MQ=255)
ttGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTacacctgtct > 2:640615/1‑134 (MQ=255)
ttGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCa > 2:1616537/1‑138 (MQ=255)
ttGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCa < 1:1616537/138‑1 (MQ=255)
tGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCa < 1:169720/137‑1 (MQ=255)
tGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGaa > 2:2108668/1‑140 (MQ=255)
cGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAAc < 2:701874/140‑1 (MQ=255)
gaTAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGa > 1:3423745/1‑140 (MQ=255)
gaTAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGa > 1:2191915/1‑140 (MQ=255)
aaCCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTGGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGa > 2:848078/1‑137 (MQ=255)
ttGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCa < 1:2108668/140‑1 (MQ=255)
tGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCAc > 1:2041470/1‑140 (MQ=255)
tGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCAc > 1:290777/1‑140 (MQ=255)
aTTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACgg > 1:2337282/1‑140 (MQ=255)
ttACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACgg < 2:269799/139‑1 (MQ=255)
ttACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGc > 2:117155/1‑140 (MQ=255)
tACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCt < 1:1578088/140‑1 (MQ=255)
tACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCt < 1:1903976/140‑1 (MQ=255)
ttCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGa < 1:3478561/125‑1 (MQ=255)
ttCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGAc > 1:1244783/1‑140 (MQ=255)
ttCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGAc > 2:3454264/1‑140 (MQ=255)
aTCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATAcc < 1:3045344/126‑1 (MQ=255)
aTCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTa > 2:1407338/1‑140 (MQ=255)
aTCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTa > 1:109461/1‑140 (MQ=255)
aTCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTa < 2:3149257/140‑1 (MQ=255)
aTCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTa > 2:1933632/1‑140 (MQ=255)
cGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTAcg < 1:1772155/140‑1 (MQ=255)
cGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGAAACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTAcg > 2:3416798/1‑140 (MQ=255)
gCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTAcgcg < 1:2610872/140‑1 (MQ=255)
gCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTAcgcg < 2:178698/140‑1 (MQ=255)
ccTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGcgt > 1:676604/1‑140 (MQ=255)
cTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGcgtc < 1:1057424/140‑1 (MQ=255)
cTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGcgtc < 2:116234/140‑1 (MQ=255)
cTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGcgtc < 2:3354083/140‑1 (MQ=255)
cTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGcgtc < 1:1946762/140‑1 (MQ=255)
cTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGcgtc < 1:3205864/140‑1 (MQ=255)
tACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGtt > 1:2965587/1‑140 (MQ=255)
gACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATa > 2:1738622/1‑140 (MQ=255)
gACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATa < 2:3055579/140‑1 (MQ=255)
gACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATa < 2:1602451/140‑1 (MQ=255)
aCGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGcgtc < 1:2549796/131‑1 (MQ=255)
aCGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGtt < 1:1528897/134‑1 (MQ=255)
aCGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAg > 1:2698522/1‑140 (MQ=255)
cGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTATTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGa < 1:1402065/140‑1 (MQ=255)
aGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACaa > 1:624964/1‑140 (MQ=255)
aGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACaa < 2:109461/140‑1 (MQ=255)
aGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACaa > 2:1575398/1‑140 (MQ=255)
ttCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGt < 2:350655/140‑1 (MQ=255)
gCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGtttt < 1:1309983/140‑1 (MQ=255)
aCGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAg < 1:1354887/140‑1 (MQ=255)
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TACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑TTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAG > NC_000913/3515928‑3516199
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
