Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A4 F28 I1 R1	164	66.7	2276140	99.1%	2255654	138.7

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,123,682	T→C	I42V (ATC→GTC)	glcB ←	malate synthase G

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,123,682	0	T	C	100.0%	217.1 / NA	58	I42V (ATC→GTC)	glcB	malate synthase G
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (30/28); total (30/28)

TTCACGCAGGAAAGATTTATAGGCCGCTTTATCTTTTACCGGCCCCGGATTGCTGCGATGCCACTCATCAAGCGCTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGATCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTAAACGGCTCTGGGTTATGGTTTGACTCATTGTTTAT  >  NC_000913/3123545‑3123812

ttCACGCAGGAAAGATTTATAGGCCGCTTTATCTTTTACCGGCCCCGGATTGCTGCGATGCCACTCATCAAGCGCTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGAcct                                                                                                                                  >  1:758025/1‑140 (MQ=255)

ttCACGCAGGAAAGATTTATAGGCCGCTTTATCTTTTACCGGCCCCGGATTGCTGCGATGCCACTCATCAAGCGCTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGAcct                                                                                                                                  >  2:1064103/1‑140 (MQ=255)

ttCACGCAGGAAAGATTTATAGGCCGCTTTATCTTTTACCGGCCCCGGATTGCTGCGATGCCACTCATCAAGCGCTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGAcct                                                                                                                                  >  2:308029/1‑140 (MQ=255)

     gCAGGAAAGATTTATAGGCCGCTTTATCTTTTACCGGCCCCGGATTGCTGCGATGCCACTCATCAAGCGCTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCtcatca                                                                                                                             >  2:1127181/1‑140 (MQ=255)

                     ggCCGCTTTATCTTTTACCGGCCCCGGATTGCTGCGATGCCACTCATCAAGCGCTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAAcg                                                                                                             <  1:1062517/140‑1 (MQ=255)

                        cGCTTTATCTTTTACCGGCCCCGGATTGCTGCGATGCCACTCATCAAGCGCTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAAcgccg                                                                                                          <  1:1127181/140‑1 (MQ=255)

                         gCTTTATCTTTTACCGGCCCCGGATTGCTGAGATGCCACTCATCAAGCGCTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCAAGATCATGAACGACCTCATCAAAATTGCGCCAGAAcgccgc                                                                                                         >  2:349268/1‑140 (MQ=255)

                          cTTTATCTTTTACCGGCCCCGGATTGCTGCGATGCCACTCATCAAGCGCTGCCTGAATGCGATCTCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCa                                                                                                        >  2:922179/1‑140 (MQ=255)

                          cTTTATCTTTTACCGGCCCCGGATTGCTGCGATGCCACTCATCAAGCGCTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCa                                                                                                        >  1:804429/1‑140 (MQ=255)

                                    tACCGGCCCCGGATTGCTGCGATGCCACTCATCAAGCGCTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGcc                                                                                              <  2:758025/140‑1 (MQ=255)

                                     aCCGGCCCCGGATTGCTGCGATGCCACTCATCAAGCGCTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGccc                                                                                             >  1:145465/1‑140 (MQ=255)

                                         gCCCCGGATTGCTGCGATGCCACTCATCAAGCGCTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGtt                                                                                         >  2:476890/1‑140 (MQ=255)

                                         gCCCCGGATTGCTGCGATGCCACTCATCAAGCGCTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGtt                                                                                         >  2:422671/1‑140 (MQ=255)

                                         gCCCCGGATTGCTGCGATGCCACTCATCAAGCGCTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGtt                                                                                         >  1:398078/1‑140 (MQ=255)

                                         gCCCCGGATTGCTGCGATGCCACTCATCAAGCGCTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGtt                                                                                         >  2:1086167/1‑140 (MQ=255)

                                          ccccGGATTGCTGCGATGCCACTCATCAAGCGCTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTc                                                                                        >  2:580790/1‑140 (MQ=255)

                                          ccccGGATTGCTGCGATGCCACTCATCAAGCGCTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTc                                                                                        >  2:160984/1‑140 (MQ=255)

                                                    ctgcGCTGCCACTCATCAAGCGCTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCACAGTCCAGCCCAGTTGCCGGTAAAAc                                                                              >  2:697464/1‑140 (MQ=255)

                                                    ctgcGATGCCACTCATCAAGCGCTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTccc                                                                                      >  2:634646/1‑132 (MQ=255)

                                                    ctgcGATGCCACTCATCAAGCGCTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTccc                                                                                      <  1:634646/132‑1 (MQ=255)

                                                    ctgcGATGCCACTCATCAAGCGCTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTc                                                                                        >  1:124251/1‑130 (MQ=255)

                                                    ctgcGATGCCACTCATCAAGCGCTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTc                                                                                        <  2:124251/130‑1 (MQ=255)

                                                    ctgcGATGCCACTCATCAAGCGCTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAAc                                                                              >  2:224721/1‑140 (MQ=255)

                                                    ctgcGATGCCACTCATCAAGCGCTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAAc                                                                              >  1:1058301/1‑140 (MQ=255)

                                                            ccACTCATCAAGCGCTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCAt                                                                      >  2:260133/1‑140 (MQ=255)

                                                                       gcgcTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGt                                                           >  2:993520/1‑140 (MQ=255)

                                                                          cTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTa                                                        >  1:1006323/1‑140 (MQ=255)

                                                                          cTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTa                                                        >  2:709022/1‑140 (MQ=255)

                                                                                  aTGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGc                                                >  2:274437/1‑140 (MQ=255)

                                                                                  aTGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGc                                                >  1:205965/1‑140 (MQ=255)

                                                                                     cGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCACATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTc                                             <  2:2692/140‑1 (MQ=255)

                                                                                      gATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCa                                            >  1:1068569/1‑140 (MQ=255)

                                                                                       aTCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCaa                                           >  2:372569/1‑140 (MQ=255)

                                                                                           cgTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCg                                       >  2:223909/1‑140 (MQ=255)

                                                                                             ttCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTa                                     >  2:607764/1‑140 (MQ=255)

                                                                                               cTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTaaa                                   <  1:160984/140‑1 (MQ=255)

                                                                                               cTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTaaa                                   <  1:580790/140‑1 (MQ=255)

                                                                                               cTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTaaa                                   <  2:852734/140‑1 (MQ=255)

                                                                                               cTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTaaa                                   <  2:145465/140‑1 (MQ=255)

                                                                                               cTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTaaa                                   <  1:922179/140‑1 (MQ=255)

                                                                                                 gCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTAAACg                                 <  1:422671/140‑1 (MQ=255)

                                                                                                  ccAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTAAACgg                                <  2:804429/140‑1 (MQ=255)

                                                                                                  ccAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTAAACgg                                <  1:1109198/140‑1 (MQ=255)

                                                                                                    aGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTAAACGGct                              <  1:260133/140‑1 (MQ=255)

                                                                                                    aGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTAAACGGct                              <  2:22319/140‑1 (MQ=255)

                                                                                                    aGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTAAACGGct                              <  2:1068569/140‑1 (MQ=255)

                                                                                                    aGCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGAGTCAATGCGTAAACGGct                              <  1:1064103/140‑1 (MQ=255)

                                                                                                     gCAACTGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTAAACGGctc                             <  1:607764/140‑1 (MQ=255)

                                                                                                          tGACGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTAAACGGCTCTGGGt                        <  2:1058301/140‑1 (MQ=255)

                                                                                                            aCGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTaaa                                   >  2:277926/1‑127 (MQ=255)

                                                                                                            aCGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTaaa                                   <  1:277926/127‑1 (MQ=255)

                                                                                                            aCGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTAAACGGctct                            >  1:507916/1‑134 (MQ=255)

                                                                                                            aCGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTAAACGGctct                            <  2:507916/134‑1 (MQ=255)

                                                                                                            aCGATTTTCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATACGTAAACGGCTCTGGGTTa                      >  1:554464/1‑140 (MQ=255)

                                                                                                                ttttCTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTAAACGGCTCTGGGTTATGGt                  <  1:387043/140‑1 (MQ=255)

                                                                                                                    cTGGTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTAAACGGCTCTGGGTTATGGTTTGa              <  2:1006323/140‑1 (MQ=255)

                                                                                                                      ggTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTAAACGGCTCTGGGTTa                      <  2:470053/130‑1 (MQ=255)

                                                                                                                      ggTGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTAAACGGCTCTGGGTTa                      >  1:470053/1‑130 (MQ=255)

                                                                                                                        tGCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTAAACGGCTCTGGGTTATGGTTTGACTCa          <  1:709022/140‑1 (MQ=255)

                                                                                                                         gCCAGATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTAAACGGCTCTGGGTTATGGTTTGACTCAt         >  1:195271/1‑140 (MQ=255)

                                                                                                                             gATCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTAAACGGCTCTGGGTTATGGTTTGACTCATTGtt     <  1:223909/140‑1 (MQ=255)

                                                                                                                              aTCATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTAAACGGCTCTGGGTTATGGTTTGACTCATTGttt    >  2:903811/1‑140 (MQ=255)

                                                                                                                                cATGAACGACCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTAAACGGCTCTGGGTTATGGTTTGACTCATTGTTTAt  <  1:1086167/140‑1 (MQ=255)

TTCACGCAGGAAAGATTTATAGGCCGCTTTATCTTTTACCGGCCCCGGATTGCTGCGATGCCACTCATCAAGCGCTGCCTGAATGCGATCGCGTTCTGCCAGCAACTGACGATTTTCTGGTGCCAGATCATGAACGATCTCATCAAAATTGCGCCAGAACGCCGCAGCGTCCAGCCCTGTTCCCGGTAAAACTTCTTCATCCACAAAACGTTTAAAATTGGCGTCAATGCGTAAACGGCTCTGGGTTATGGTTTGACTCATTGTTTAT  >  NC_000913/3123545‑3123812

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A