Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A5 F28 I1 R1	139	58.0	1973578	98.9%	1951868	138.2

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,901,630	T→C	A51A (GCA→GCG)	yoaL ←	protein YoaL

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,901,630	0	T	C	100.0%	305.3 / NA	83	A51A (GCA→GCG)	yoaL	protein YoaL
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (44/39); total (44/39)

ATGAAGACCAGGTTATCGATACCCAGCACAATTTCGAGAACAACAAGCGTGAGTAGCCCCGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAATGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTGCGGGCTACTGCCCTATACTCCAT  >  NC_000913/1901494‑1901758

aTGAAGACCAGGTTATCGATACCCAGCACAATTTCGAGAACAACAAGCGTGAGTAGCCCCGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCa                                                                                                                               <  2:712492/140‑1 (MQ=255)

   aaGACCAGGTTATCGATACCCAGCACAATTTCGAGAACAACAAGCGTGAGTAGCCCCGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGc                                                                                                                            >  1:926766/1‑140 (MQ=255)

           gTTATCGATACCCAGCACAATTTCGAGAACAACAAGCGTGAGTAGCCCCGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGAc                                                                                                                    >  2:549102/1‑140 (MQ=255)

           gTTATCGATACCCAGCACAATTTCGAGAACAACAAGCGTGAGTAGCCCCGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGAc                                                                                                                    >  1:669893/1‑140 (MQ=255)

               tCGATACCCAGCACAATTTCGAGAACAACAAGCGTGAGTAGCCCCGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACaaaa                                                                                                                >  1:669658/1‑140 (MQ=255)

               tCGATACCCAGCACAATTTCGAGAACAACAAGCGTGAGTAGCCCCGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACaaaa                                                                                                                >  2:196583/1‑140 (MQ=255)

                cGATACCCAGCACAATTTCGAGAACAACAAGCGTGAGTAGCCCCGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAAt                                                                                                               >  1:149072/1‑140 (MQ=255)

                 gATACCCAGCACAATTTCGAGAACAACAAGCGTGAGTAGCCCCGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATg                                                                                                              <  2:926766/140‑1 (MQ=255)

                    aCCCAGCACAATTTCGAGAACAACAAGCGTGAGTAGCCCCGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCaa                                                                                                           >  1:846826/1‑140 (MQ=255)

                     cccAGCACAATTTCGAGAACAACAAGCGTGAGTAGCCCCGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCaaa                                                                                                          >  2:488651/1‑140 (MQ=255)

                        aGCACAATTTCGAGAACAACAAGCGTGAGTAGCCCCGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATg                                                                                                              >  1:849468/1‑133 (MQ=255)

                        aGCACAATTTCGAGAACAACAAGCGTGAGTAGCCCCGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATg                                                                                                              <  2:849468/133‑1 (MQ=255)

                        aGCACAATTTCGAGAACAACAAGCGTGAGTAGCCCCGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGa                                                                                                       >  1:119635/1‑140 (MQ=255)

                         gCACAATTTCGAGAACAACAAGCGTGAGTAGCCCCGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGaa                                                                                                      >  1:509810/1‑140 (MQ=255)

                         gCACAATTTCGAGAACAACAAGCGTGAGTAGCCCCGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGaa                                                                                                      <  2:669893/140‑1 (MQ=255)

                             aaTTTCGAGAACAACAAGCGTGAGTAGCCCCGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGt                                                                                                  <  2:669658/140‑1 (MQ=255)

                               tttCGAGAACAACAAGCGTGAGTAGCCCCGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGc                                                                                                >  1:573931/1‑140 (MQ=255)

                                 tCGAGAACAACAAGCGTGAGTAGCCCCGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCgg                                                                                              <  1:196583/140‑1 (MQ=255)

                                     gaACAACAAGCGTGAGTAGCCCCGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATa                                                                                          <  2:119635/140‑1 (MQ=255)

                                     gaACAACAAGCGTGAGTAGCCCCGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATa                                                                                          <  1:488651/140‑1 (MQ=255)

                                           caaGCGTGAGTAGCCCCGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGc                                                                                    <  2:846826/140‑1 (MQ=255)

                                                  gAGTAGCCCCGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAag                                                                             >  2:861211/1‑140 (MQ=255)

                                                  gAGTAGCCCCGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAag                                                                             >  2:925236/1‑140 (MQ=255)

                                                   aGTAGCCCCGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAagg                                                                            >  1:856383/1‑140 (MQ=255)

                                                    gTAGCCCCGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAaggc                                                                           <  2:587727/140‑1 (MQ=255)

                                                    gTAGCCCCGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAaggc                                                                           <  1:284994/140‑1 (MQ=255)

                                                        ccccGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAaggcaggc                                                                       >  2:422335/1‑140 (MQ=255)

                                                        ccccGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAaggcaggc                                                                       >  1:803582/1‑140 (MQ=255)

                                                        ccccGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAaggcaggc                                                                       >  1:942679/1‑140 (MQ=255)

                                                        ccccGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAaggcaggc                                                                       >  2:491204/1‑140 (MQ=255)

                                                             cccAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTaa                                                                  >  2:56602/1‑140 (MQ=255)

                                                             cccAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTaa                                                                  >  2:531404/1‑140 (MQ=255)

                                                              ccAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTaaa                                                                 <  2:247812/140‑1 (MQ=255)

                                                                   ttGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGcc                                                            <  2:42175/140‑1 (MQ=255)

                                                                     gAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTg                                                          <  2:509810/140‑1 (MQ=255)

                                                                        gggTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATg                                                       >  1:809305/1‑140 (MQ=255)

                                                                           tCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGcc                                                            >  2:344707/1‑132 (MQ=255)

                                                                           tCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGcc                                                            <  1:344707/132‑1 (MQ=255)

                                                                                     aTTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTc                                          >  2:577166/1‑140 (MQ=255)

                                                                                     aTTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTc                                          >  1:147724/1‑140 (MQ=255)

                                                                                       tCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGaa                                                  <  2:529432/130‑1 (MQ=255)

                                                                                       tCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGaa                                                  >  1:529432/1‑130 (MQ=255)

                                                                                       tCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCgg                                        >  1:512294/1‑140 (MQ=255)

                                                                                         cATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTg                                      <  1:711695/140‑1 (MQ=255)

                                                                                         cATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTg                                      <  2:803582/140‑1 (MQ=255)

                                                                                         cATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTg                                      <  2:809305/140‑1 (MQ=255)

                                                                                         cATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTg                                      >  1:521571/1‑140 (MQ=255)

                                                                                           tGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGAc                                    <  2:521714/140‑1 (MQ=255)

                                                                                              cAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACACAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGAt                                 <  2:102647/140‑1 (MQ=255)

                                                                                              cAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACACAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGAt                                 >  1:102647/1‑140 (MQ=255)

                                                                                                 gCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACACAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTg                                      >  2:574064/1‑132 (MQ=255)

                                                                                                 gCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAACACAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTg                                      <  1:574064/132‑1 (MQ=255)

                                                                                                      tGCTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTg                         >  2:979501/1‑140 (MQ=255)

                                                                                                        cTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTGCg                       <  1:531404/140‑1 (MQ=255)

                                                                                                        cTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGAATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGa                                     >  2:809330/1‑126 (MQ=255)

                                                                                                        cTTAAGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGAATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGa                                     <  1:809330/126‑1 (MQ=255)

                                                                                                            aGGAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTGCGGGCt                   >  1:91496/1‑140 (MQ=255)

                                                                                                             ggAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTGCGGGCTa                  <  2:512294/140‑1 (MQ=255)

                                                                                                             ggAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTGCGGGCTa                  <  2:521571/140‑1 (MQ=255)

                                                                                                             ggAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTGCGGGCTa                  <  2:942679/140‑1 (MQ=255)

                                                                                                             ggAATAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTGCGGGCTa                  <  2:573931/140‑1 (MQ=255)

                                                                                                               aaTAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTGCGGGCTACt                <  1:577166/140‑1 (MQ=255)

                                                                                                                aTAGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTGCGGGCTACTg               <  2:149072/140‑1 (MQ=255)

                                                                                                                  aGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTg                         <  2:819961/128‑1 (MQ=255)

                                                                                                                  aGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTg                         >  1:819961/1‑128 (MQ=255)

                                                                                                                  aGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTGCg                       <  2:916314/130‑1 (MQ=255)

                                                                                                                  aGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTGCg                       >  1:916314/1‑130 (MQ=255)

                                                                                                                  aGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTGCGGGCTACTGcc             >  2:307874/1‑140 (MQ=255)

                                                                                                                  aGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTGCGGGCTACTGcc             >  2:957121/1‑140 (MQ=255)

                                                                                                                  aGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTGCGGGCTACTGcc             >  1:134762/1‑140 (MQ=255)

                                                                                                                  aGCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTGCGGGCTACTGcc             <  1:979501/140‑1 (MQ=255)

                                                                                                                   gCTATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTGCGGGCTACTGccc            >  2:233919/1‑140 (MQ=255)

                                                                                                                     tATTCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTGCGGGCTACTGCCCta          <  1:233919/140‑1 (MQ=255)

                                                                                                                       ttCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTGCGGGCTACTGCCCtata        <  1:861211/140‑1 (MQ=255)

                                                                                                                       ttCGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTGCGGGCTACTGCCCtata        <  1:925236/140‑1 (MQ=255)

                                                                                                                         cGACGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTGCGGGCTACTGCCCTATACt      >  1:589192/1‑140 (MQ=255)

                                                                                                                            cGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTGCGGGCTACTGCCCTATACTCCa   >  1:471552/1‑140 (MQ=255)

                                                                                                                            cGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTGCGGGCTACTGCCCTATACTCCa   <  1:491204/140‑1 (MQ=255)

                                                                                                                            cGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTGCGGGCTACTGCCCTATACTCCa   <  1:56602/140‑1 (MQ=255)

                                                                                                                            cGCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTGCGGGCTACTGCCCTATACTCCa   >  1:714238/1‑140 (MQ=255)

                                                                                                                             gCCAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTGCGGGCTACTGCCCTATACTCCAt  >  2:985208/1‑140 (MQ=255)

                                                                                                                               cAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTGCGGGCTa                  >  2:735676/1‑122 (MQ=255)

                                                                                                                               cAGAAATAACGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTGCGGGCTa                  <  1:735676/122‑1 (MQ=255)

ATGAAGACCAGGTTATCGATACCCAGCACAATTTCGAGAACAACAAGCGTGAGTAGCCCCGCCCAAATTGAGGGGTCCATTAAGAATTCCATGACAAGCTCCTGCTTAAGGAATAGCTATTCGACGCCAGAAATAATGCAGGCGTAACGACAAAATGCAAACGAAAGGTGCGGCATAGAGTGCCAGAAAGGCAGGCGTTAAAAGGCCTGATGCTGAAATGACGTCGGTGACGATCCATACTGCGGGCTACTGCCCTATACTCCAT  >  NC_000913/1901494‑1901758

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A