Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F28 I1 R1
|
139 |
58.0 |
1973578 |
98.9% |
1951868 |
138.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,650,746 |
A→G |
intergenic (+84/‑545) |
arsC → / → yhiS |
arsenate reductase/putative uncharacterized protein YhiS |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,650,746 | 0 | A | G | 100.0%
| 291.0
/ NA
| 79 | intergenic (+84/‑545) | arsC/yhiS | arsenate reductase/putative uncharacterized protein YhiS |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (39/40); total (39/40) |
CTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAG > NC_000913/3650608‑3650882
|
ctcCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCa < 1:139205/140‑1 (MQ=255)
aTGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCa > 2:593235/1‑129 (MQ=255)
aTGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGaaa > 1:849499/1‑140 (MQ=255)
aTGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGaaa > 2:859933/1‑140 (MQ=255)
aTGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGaaa > 2:336290/1‑140 (MQ=255)
aTGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGaaa > 1:453077/1‑140 (MQ=255)
aTGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGaaa > 1:350386/1‑140 (MQ=255)
aTGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGaaa > 1:702770/1‑140 (MQ=255)
gagaAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCg < 1:244620/140‑1 (MQ=255)
gagaAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCg < 2:350386/140‑1 (MQ=255)
agaAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGa < 2:894214/140‑1 (MQ=255)
agaAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGa > 1:702157/1‑140 (MQ=255)
gaAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGAt > 1:110600/1‑140 (MQ=255)
gaAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGAt < 2:433320/140‑1 (MQ=255)
gaAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGAt > 1:433320/1‑140 (MQ=255)
gaAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGAt < 2:13897/140‑1 (MQ=255)
gaAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGAt < 1:819100/140‑1 (MQ=255)
aGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGaa < 1:731104/140‑1 (MQ=255)
aGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGaa < 2:110600/140‑1 (MQ=255)
aGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGaa < 2:849499/140‑1 (MQ=255)
aGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGaa > 2:577310/1‑140 (MQ=255)
gTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAAt < 1:496223/140‑1 (MQ=255)
ggTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAg < 2:702157/140‑1 (MQ=255)
gTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGTTAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGt > 2:870124/1‑140 (MQ=255)
gTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGt < 2:453077/140‑1 (MQ=255)
gTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGt < 2:677226/140‑1 (MQ=255)
gTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGt < 2:202959/140‑1 (MQ=255)
gTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGt < 2:188784/140‑1 (MQ=255)
gTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGt < 2:702770/140‑1 (MQ=255)
gTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGt < 2:844940/140‑1 (MQ=255)
gTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGt < 1:870124/140‑1 (MQ=255)
cGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGAt < 2:890499/123‑1 (MQ=255)
cGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGAt > 1:890499/1‑123 (MQ=255)
cGGGTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTg > 2:700983/1‑140 (MQ=255)
gggTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGt > 1:835157/1‑140 (MQ=255)
ggTAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTa < 2:674795/140‑1 (MQ=255)
tAAGCGCCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAgg > 2:904932/1‑140 (MQ=255)
gcCTGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGa < 2:901301/140‑1 (MQ=255)
tGAAATAAAGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCTCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAg < 1:859933/140‑1 (MQ=255)
aaaGCGGCGATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAg < 2:835157/140‑1 (MQ=255)
cgATAT‑CCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCa > 2:126449/1‑140 (MQ=255)
acaGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCt < 1:784066/140‑1 (MQ=255)
aGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTAt < 1:577310/140‑1 (MQ=255)
ggTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTAtt > 1:194254/1‑140 (MQ=255)
gttAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGAtttt < 1:377960/130‑1 (MQ=255)
gttAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGAtttt < 1:619422/130‑1 (MQ=255)
gttAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGAtttt > 2:377960/1‑130 (MQ=255)
gttAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGAtttt > 2:619422/1‑130 (MQ=255)
ttAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTAt < 2:481995/134‑1 (MQ=255)
ttAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTAt > 1:481995/1‑134 (MQ=255)
cgcTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTg > 1:310567/1‑140 (MQ=255)
tCGGATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCaa > 1:260183/1‑140 (MQ=255)
ggATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGt > 2:451568/1‑128 (MQ=255)
ggATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGt < 1:451568/128‑1 (MQ=255)
ggATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAAtt > 1:710641/1‑140 (MQ=255)
ggATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAAtt > 1:519238/1‑140 (MQ=255)
ggATGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAAtt > 2:588659/1‑140 (MQ=255)
aTGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGGATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTAt > 1:327847/1‑140 (MQ=255)
aTGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTAt > 2:664763/1‑140 (MQ=255)
aTGCGACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTAt < 1:588659/140‑1 (MQ=255)
gACGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGCGAGATTCCAATTATcgcg > 1:958521/1‑140 (MQ=255)
aCGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGt > 1:648102/1‑140 (MQ=255)
cGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTc < 2:648102/140‑1 (MQ=255)
cGCTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTc > 1:507720/1‑140 (MQ=255)
cTGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCa < 2:194254/140‑1 (MQ=255)
tGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAg > 2:727833/1‑140 (MQ=255)
tGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAg > 2:130068/1‑140 (MQ=255)
tGGCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAg < 1:904932/140‑1 (MQ=255)
ggCGCGTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATCTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGc > 1:267147/1‑140 (MQ=255)
gcgTCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATg < 1:242487/140‑1 (MQ=255)
tCTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGgtg < 1:126449/140‑1 (MQ=255)
cTTATCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGgtgt > 1:891423/1‑140 (MQ=255)
tCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCGGCATGGTGTATCa > 2:828773/1‑140 (MQ=255)
tCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCa < 2:788398/140‑1 (MQ=255)
tCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCa < 1:130068/140‑1 (MQ=255)
tCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCa < 1:727833/140‑1 (MQ=255)
tCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCa > 1:788398/1‑140 (MQ=255)
tCCGACCTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCa > 1:103483/1‑140 (MQ=255)
ccTGCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAg < 2:260183/140‑1 (MQ=255)
|
CTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAG > NC_000913/3650608‑3650882
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
