Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A27 F30 I1 R1 23 104.4 3531544 99.3% 3506823 138.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,744,255 IS5 (+) +4 bp intergenic (+45/‑70) yiaL → / → yiaM DUF386 domain‑containing protein YiaL/2,3‑diketo‑L‑gulonate:Na(+) symporter ‑ membrane subunit

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2288919 =NA (NA)141 (1.350) 66/276 0.2 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 3744255 = 0 (0.000)intergenic (+45/‑73) yiaL/yiaM DUF386 domain‑containing protein YiaL/2,3‑diketo‑L‑gulonate:Na(+) symporter ‑ membrane subunit
* ? NC_000913 = 2290113NA (NA)126 (1.210) 70/276 0.2 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 3744258 0 (0.000)intergenic (+48/‑70) yiaL/yiaM DUF386 domain‑containing protein YiaL/2,3‑diketo‑L‑gulonate:Na(+) symporter ‑ membrane subunit

Only 100 of 141 total aligned reads displayed.

GGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2289057‑2288919
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTAT  >  NC_000913/3744255‑3744392
                                                                                                                                                                                                                                                                                     
GGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                                                                           <  1:812094/140‑1
GGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                                                                           <  1:86144/140‑1
GGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                                                                           >  2:86144/1‑140
GGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                                                                           >  1:880437/1‑140
GGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                                                                           >  2:1182358/1‑140
GGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                                                                           >  1:1573601/1‑140
  ATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA                                                                                                                                         <  1:367564/140‑1
  ATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA                                                                                                                                         <  2:726118/140‑1
  ATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA                                                                                                                                         >  1:1732065/1‑140
  ATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA                                                                                                                                         <  1:1691456/140‑1
   TAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA                                                                                                                                        <  1:943170/140‑1
   TAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA                                                                                                                                        <  1:522460/140‑1
    AACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAC                                                                                                                                       >  2:327020/1‑140
    AACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAC                                                                                                                                       <  1:346972/140‑1
    AACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAC                                                                                                                                       >  1:102075/1‑140
    AACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAC                                                                                                                                       <  1:1559764/140‑1
    AACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAC                                                                                                                                       <  1:795470/140‑1
    AACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAC                                                                                                                                       >  1:1163251/1‑140
    AACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAC                                                                                                                                       >  2:1422438/1‑140
    AACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA                                                                                                                                        >  1:539736/1‑139
    AACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA                                                                                                                                        <  2:539736/139‑1
     ACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACT                                                                                                                                      <  1:609008/140‑1
            AAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAC                                                                                                                                       >  1:1305270/1‑132
            AAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAC                                                                                                                                       <  2:1305270/132‑1
                GGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAAT                                                                                                                           <  1:1479089/140‑1
                GGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAAT                                                                                                                           >  1:900202/1‑140
                  CGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAC                                                                                                                                       >  1:844442/1‑126
                  CGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAC                                                                                                                                       <  2:844442/126‑1
                   GAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCA                                                                                                                        <  2:900202/140‑1
                   GAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCA                                                                                                                        <  2:582486/140‑1
                   GAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA                                                                                                                                        <  2:542171/124‑1
                           GGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTG                                                                                                                <  1:327020/140‑1
                                AAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCGAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACAT                                                                                                           <  2:377690/140‑1
                                 AATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATG                                                                                                          <  1:717214/140‑1
                                      GCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACT                                                                                                     >  1:1612890/1‑140
                                      GCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACT                                                                                                     >  1:1568987/1‑140
                                      GCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACT                                                                                                     >  1:1361693/1‑140
                                      GCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACT                                                                                                     <  1:1225059/140‑1
                                      GCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACT                                                                                                     <  2:1300194/140‑1
                                      GCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACAT                                                                                                           >  2:1250705/1‑134
                                      GCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACAT                                                                                                           <  1:1250705/134‑1
                                         gacTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGA                                                                                                  >  2:1281960/4‑140
                                         GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCACTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGA                                                                                                  >  1:244852/1‑140
                                          ATTCAAGGCACTTACGGGCGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGCAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAA                                                                                                 >  2:1512973/1‑140
                                           TTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAAT                                                                                                >  1:813255/1‑140
                                           TTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAAT                                                                                                >  2:807222/1‑140
                                           TTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAAT                                                                                                >  1:1036795/1‑140
                                           TTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAAT                                                                                                >  1:1164485/1‑140
                                           TTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAAT                                                                                                >  1:1256486/1‑140
                                           TTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAAT                                                                                                >  1:193034/1‑140
                                                GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCACACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGA                                                                                           >  1:458962/1‑140
                                                  CATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACA                                                                                         <  2:1256486/140‑1
                                                     TTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGAC                                                                                      >  1:1030610/1‑140
                                                      TACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACA                                                                                     >  2:115000/1‑140
                                                      TACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACA                                                                                     <  2:503200/140‑1
                                                         GGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAG                                                                                  <  1:312490/140‑1
                                                         GGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAG                                                                                  <  1:516738/140‑1
                                                          GGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGC                                                                                 <  1:84987/140‑1
                                                          GGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCACACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGC                                                                                 <  2:458962/140‑1
                                                            AGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCT                                                                               <  2:1116320/140‑1
                                                            AGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCT                                                                               <  2:569971/140‑1
                                                            AGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCT                                                                               >  1:569971/1‑140
                                                            AGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCT                                                                               <  2:1686694/140‑1
                                                             GAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTC                                                                              <  1:1519570/140‑1
                                                             GAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTC                                                                              >  2:579926/1‑140
                                                              AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCGCATGCGACTTGAATTATGACAGACATAGCCTCA                                                                             <  1:598785/140‑1
                                                              AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCA                                                                             <  2:193034/140‑1
                                                              AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCA                                                                             >  2:1683069/1‑140
                                                              AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCA                                                                             >  1:842239/1‑140
                                                                   ATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAA                                                                        <  1:579926/140‑1
                                                                        CTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACA                                                                                     >  1:1330587/1‑122
                                                                        CTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACA                                                                                     <  2:1330587/122‑1
                                                                                 GAAGAAAAGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAA                                                          <  1:982046/140‑1
                                                                                      AATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAAATACT                                                     <  2:1612890/140‑1
                                                                                      AATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAAATACT                                                     <  2:64371/140‑1
                                                                                      AATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAAATACT                                                     <  1:1683069/140‑1
                                                                                       ATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAAATACTC                                                    >  2:1086647/1‑140
                                                                                         GAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAAATACTCGA                                                  <  2:814235/140‑1
                                                                                                 tcAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATAC                                          >  2:749378/3‑140
                                                                                                 TGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATAC                                          >  2:637002/1‑140
                                                                                                  GAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACT                                         >  1:1377568/1‑140
                                                                                                     TCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAATTACTCGAAGCAATACTGGC                                      >  2:807335/1‑140
                                                                                                        GCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGAT                                   >  2:1606129/1‑140
                                                                                                           GAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAA                                <  2:1173773/140‑1
                                                                                                             GAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATC                              >  2:501643/1‑140
                                                                                                              AAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTG                                        >  1:1397955/1‑129
                                                                                                              AAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTG                                        <  2:1397955/129‑1
                                                                                                                   TTTCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCG                        >  1:924906/1‑140
                                                                                                                     TCCCCGCTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTA                      <  1:800027/140‑1
                                                                                                                           CTTATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCC                >  2:1723419/1‑140
                                                                                                                             TATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTG              >  2:946327/1‑140
                                                                                                                              ATTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGa             <  2:1350340/140‑2
                                                                                                                               TTCGCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTA            <  2:932604/140‑1
                                                                                                                                  GCACCTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTG         <  2:924906/140‑1
                                                                                                                                      CTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATT     >  2:795777/1‑140
                                                                                                                                      CTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTC                 >  2:430032/1‑128
                                                                                                                                      CTTCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTC                 <  1:430032/128‑1
                                                                                                                                        TCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGT        <  1:476651/135‑1
                                                                                                                                        TCCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTAGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTA   >  1:249513/1‑140
                                                                                                                                         CCCTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTAT  <  1:927976/140‑1
                                                                                                                                                                                                                                                                                     
GGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2289057‑2288919
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAACTATATTAATAATTCAGGTTGCTGCACATGCGACTTGAATTATGACAGACATAGCCTCAAGGAATAGCTATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTAT  >  NC_000913/3744255‑3744392

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.

GATK/CNVnator alignment

N/A