Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A11 F60 I1 R1 18 56.4 1905474 98.8% 1882608 138.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,999,358 A→T Q459L (CAG→CTG)  uvrD → ssDNA translocase and dsDNA helicase ‑ DNA helicase II

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,999,3580AT98.4% 204.1 / ‑3.6 61Q459L (CAG→CTG) uvrDssDNA translocase and dsDNA helicase ‑ DNA helicase II
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base T (28/32);  total (29/32)
Fisher's exact test for biased strand distribution p-value = 4.75e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.74e-01

CCAACGCGGGGTATTGGTGACCGGACGCTGGACGTGGTACGTCAGACATCGCGCGATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCAGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAA  >  NC_000913/3999222‑3999483
                                                                                                                                        |                                                                                                                             
ccAACGCGGGGTATTGGTGACCGGACGCTGGACGTGGTACGTCAGACATCGCGCGATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCg                                                                                                                            <  1:818068/140‑1 (MQ=255)
ccAACGCGGGGTATTGGTGACCGGACGCTGGACGTGGTACGTCAGACATCGCGCGATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCg                                                                                                                            <  1:517844/140‑1 (MQ=255)
 cAACGCGGGGTATTGGTGACCGGACGCTGGACGTGGTACGTCAGACATCGCGCGATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGa                                                                                                                           >  2:58142/1‑140 (MQ=255)
    cgcgGGGTATTGGTGACCGGACGCTGGACGTGGTACGTCAGACATCGCGCGATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGAttt                                                                                                                        >  1:851482/1‑140 (MQ=255)
    cgcgGGGTATTGGTGACCGGACGCTGGACGTGGTACGTCAGACATCGCGCGATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGAttt                                                                                                                        >  2:719997/1‑140 (MQ=255)
      cgGGGTATTGGTGACCGGACGCTGGACGTGGTACGTCAGACATCGCGCGATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTAt                                                                                                                      >  1:272995/1‑140 (MQ=255)
         ggTATTGGTGACCGGACGCTGGACGTGGTACGTCAGACATCGCGCGATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGa                                                                                                                   >  1:266650/1‑140 (MQ=255)
              tGGTGACCGGACGCTGGACGTGGTACGTCAGACATCGCGCGATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTaa                                                                                                              >  2:944339/1‑140 (MQ=255)
               ggTGACCGGACGCTGGACGTGGTACGTCAGACATCGCGCGATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAAt                                                                                                             >  2:485950/1‑140 (MQ=255)
                     cGGACGCTGGACGTGGTACGTCAGACATCGCGCGATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGc                                                                                                       >  1:762249/1‑140 (MQ=255)
                     cGGACGCTGGACGTGGTACGTCAGACATCGCGCGATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGc                                                                                                       >  2:349887/1‑140 (MQ=255)
                     cGGACGCTGGACGTGGTACGTCAGACATCGCGCGATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGc                                                                                                       >  1:229598/1‑140 (MQ=255)
                       gACGCTGGACGTGGTACGTCAGACATCGCGCGATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCt                                                                                                     <  2:851482/140‑1 (MQ=255)
                       gACGCTGGACGTGGTACGTCAGACATCGCGCGATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATCAATCGACGCCt                                                                                                     <  1:58142/140‑1 (MQ=255)
                         cGCTGGACGTGGTACGTCAGACATCGCGCGATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTa                                                                                                   <  2:795833/140‑1 (MQ=255)
                          gCTGGACGTGGTACGTCAGACATCGCGCGATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAg                                                                                                  >  2:133648/1‑140 (MQ=255)
                                 gTGGTACGTCAGACATCGCGCGATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTa                                                                                                   <  2:30263/132‑1 (MQ=255)
                                 gTGGTACGTCAGACATCGCGCGATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTa                                                                                                   >  1:30263/1‑132 (MQ=255)
                                 gTGGTACGTCAGACATCGCGCGATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGa                                                                                           <  1:718743/140‑1 (MQ=255)
                                   ggTACGTCAGACATCGCGCGATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGaaa                                                                                         >  2:58090/1‑140 (MQ=255)
                                    gTACGTCAGACATCGCGCGATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAAc                                                                                        >  1:9193/1‑140 (MQ=255)
                                               aTCGCGCGATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGc                                                                             >  2:944829/1‑140 (MQ=255)
                                                tCGCGCGATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGcc                                                                            <  1:133648/140‑1 (MQ=255)
                                                tCGCGCGATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGcc                                                                            <  2:272995/140‑1 (MQ=255)
                                                 cgcgcgATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGcc                                                                            >  1:539295/1‑139 (MQ=255)
                                                 cgcgcgATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGcc                                                                            <  2:539295/139‑1 (MQ=255)
                                                 cgcgcgATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCg                                                                           >  2:559675/1‑140 (MQ=255)
                                                 cgcgcgATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCg                                                                           >  2:507216/1‑140 (MQ=255)
                                                    gcgATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTg                                                                        <  1:719997/140‑1 (MQ=255)
                                                    gcgATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTg                                                                        <  1:349887/140‑1 (MQ=255)
                                                    gcgATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTg                                                                        <  2:762249/140‑1 (MQ=255)
                                                    gcgATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTg                                                                        <  2:58511/140‑1 (MQ=255)
                                                    gcgATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTg                                                                        <  1:507216/140‑1 (MQ=255)
                                                    gcgATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTg                                                                        <  1:696367/140‑1 (MQ=255)
                                                    gcgATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTg                                                                        <  1:916817/140‑1 (MQ=255)
                                                    gcgATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTg                                                                        <  2:266650/140‑1 (MQ=255)
                                                                     ctctGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCg                                                       <  1:456266/140‑1 (MQ=255)
                                                                       ctGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCggg                                                     <  2:229598/140‑1 (MQ=255)
                                                                        tGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGt                                                    >  2:860334/1‑140 (MQ=255)
                                                                        tGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGt                                                    >  2:54779/1‑140 (MQ=255)
                                                                         ggcaggcaTGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTa                                                   >  1:724826/1‑140 (MQ=255)
                                                                         ggcaggcaTGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGACGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTa                                                   >  2:390172/1‑140 (MQ=255)
                                                                                aTGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTaa                                              >  1:473397/1‑138 (MQ=255)
                                                                                aTGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTaa                                              <  2:473397/138‑1 (MQ=255)
                                                                                     gTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTcc                                       <  1:599240/140‑1 (MQ=255)
                                                                                      tGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCAGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCg                                      >  2:633611/1‑140 (MQ=255)
                                                                                            gTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGc                                <  1:860334/140‑1 (MQ=255)
                                                                                             ttGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTaa                                              <  1:923938/125‑1 (MQ=255)
                                                                                             ttGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTaa                                              >  2:923938/1‑125 (MQ=255)
                                                                                             ttGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCg                               >  1:880311/1‑140 (MQ=255)
                                                                                                cAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTAc                            <  1:58090/140‑1 (MQ=255)
                                                                                                     aaaaGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGt                       <  2:556579/140‑1 (MQ=255)
                                                                                                     aaaaGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGt                       <  1:54779/140‑1 (MQ=255)
                                                                                                      aaaGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTa                      <  2:880311/140‑1 (MQ=255)
                                                                                                       aaGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCgg                                     <  1:500216/124‑1 (MQ=255)
                                                                                                       aaGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCgg                                     >  2:500216/1‑124 (MQ=255)
                                                                                                              cGCCGGGCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAgg              >  1:269434/1‑140 (MQ=255)
                                                                                                                   ggCGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAg         <  1:944339/140‑1 (MQ=255)
                                                                                                                     cGAGCTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAggg       <  1:559675/140‑1 (MQ=255)
                                                                                                                         cTGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGaa   >  2:260037/1‑140 (MQ=255)
                                                                                                                          tGCCAGCGCCTTGCTGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGaaa  <  2:269434/140‑1 (MQ=255)
                                                                                                                                        |                                                                                                                             
CCAACGCGGGGTATTGGTGACCGGACGCTGGACGTGGTACGTCAGACATCGCGCGATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCAGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAA  >  NC_000913/3999222‑3999483

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A