Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A23 F60 I1 R1 18 61.6 2092650 99.2% 2075908 139.4

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,605,562 C→A V17F (GTC→TTC)  yhhM ← DUF2500 domain‑containing protein YhhM

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,605,5620CA98.3% 202.9 / ‑5.0 60V17F (GTC→TTC) yhhMDUF2500 domain‑containing protein YhhM
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base A (24/35);  total (24/36)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

GCTGGCGCGAACGGCGATCGTTAATCGGTTTTTCCCGCTTGTTGCTCACCACCACCAGCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTGCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAAC  >  NC_000913/3605430‑3605692
                                                                                                                                    |                                                                                                                                  
gctgGCGCGAACGGCGATCGTTAATCGGTTTTTCCCGCTTGTTGCTCACCACCACCAGCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGACGCTGTTTCATAAAACCAAACGATGCGGCGAAGACAAtt                                                                                                                             >  2:419507/1‑140 (MQ=255)
   ggCGCGAACGGCGATCGTTAATCGGTTTTTCCCGCTTGTTGCTCACCACCACCAGCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAg                                                                                                                          <  2:105341/140‑1 (MQ=255)
   ggCGCGAACGGCGATCGTTAATCGGTTTTTCCCGCTTGTTGCTCACCACCACCAGCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAg                                                                                                                          <  2:787750/140‑1 (MQ=255)
   ggCGCGAAAGGCGATCGATAATAGGTTTTTCTCTCTTGTTGCTCACCACCACCAGCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAg                                                                                                                          <  2:490798/140‑1 (MQ=255)
    gcgcGAACGGCGATCGTTAATCGGTTTTTCCCGCTTGTTGCTCACCACCACCAGCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGc                                                                                                                         >  1:837484/1‑140 (MQ=255)
    gcgcGAACGGCGATCGTTAATCGGTTTTTCCCGCTTGTTGCTCACCACCACCAGCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTCCCCGTCGCAGTTGCATAAAACGAAAAGATGTGGCGAAGACAATTAAGc                                                                                                                         >  2:288589/1‑140 (MQ=255)
     cgcgAACGGCGATCGTTAATCGGTTTTTCCCGCTTGTTGCTCACCACCACCAGCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGcc                                                                                                                        >  2:607932/1‑140 (MQ=255)
     cgcgAACGGCGATCGCTAATCGTTTCTTCCCGCTTGTTGCTCACCACCACCAGCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGcc                                                                                                                        <  1:288589/140‑1 (MQ=255)
          atggCGATCGTTAATCGCTTTTTCCCGCTTGCTGCTCACCACCACCAGCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGa                                                                                                                   <  2:348184/138‑1 (MQ=255)
          aCGGCGATCGTTAATCGTTTTTTCCCGCTTGTTGCTCACAACCACCAGTTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGa                                                                                                                   <  2:304435/140‑1 (MQ=255)
           tggCGATCGTTAATCGGTTTTTCCCGCTTGTTGCTCACCACCACCAGCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGAt                                                                                                                  <  2:527399/139‑1 (MQ=255)
           cGGCGATCGTTAATCGGTTTTTCCCGCTTGTTGCTCACCACCACCAGCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGAt                                                                                                                  <  1:62550/140‑1 (MQ=255)
               gATCGTTAATCGGTTTTTCCCGGTTGTTGCTTACCGCCATCAGCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACa                                                                                                              <  2:346662/140‑1 (MQ=255)
               gATCGTTAATCGGTTTTTCCCGCTTGTTGCTCACCACCACCAGCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACa                                                                                                              <  2:620145/140‑1 (MQ=255)
                      aaTCGGTTTTTCCCGCTTGTTGCTCACCACCACCAGCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGcc                                                                                                                        >  1:249665/1‑123 (MQ=255)
                      aaTCGGTTTTTCCCGCTTGTTGCTCACCACCACCAGCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGcc                                                                                                                        <  2:249665/123‑1 (MQ=255)
                      aaTCGGTTTTTCCCGCTTGTTGCTCACCACCACCAGCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATaaaga                                                                                                       >  1:549331/1‑140 (MQ=255)
                        tCGGTTTTTCCCGCTTGTTGCTCACCACCACCAGCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATaaagaaa                                                                                                     >  2:932698/1‑140 (MQ=255)
                            tttttCCCGCTTGTTGCTCACCACCACCAGCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAagag                                                                                                 >  2:155270/1‑140 (MQ=255)
                               ttCCCGCTTGTTGCTCACCACCACCAGCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAggcg                                                                                              >  2:247288/1‑138 (MQ=255)
                                 cccGCTTGTTGCTCACCACCACCAGCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAggtggt                                                                                            <  2:837484/140‑1 (MQ=255)
                                     cTTGTTGCTCACCACCACCAGCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGc                                                                                        <  1:644174/140‑1 (MQ=255)
                                      ttgttgCTCACCACCACCAGCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCt                                                                                       <  1:13911/140‑1 (MQ=255)
                                      ttgttgCTCACCACCACCAGCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCt                                                                                       <  1:824225/140‑1 (MQ=255)
                                      ttgttgCTCACCACCACCAGCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCt                                                                                       <  2:822969/140‑1 (MQ=255)
                                      ttgttgCTCACCACCACCAGCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCt                                                                                       <  1:247288/140‑1 (MQ=255)
                                                   ccaccaGCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATCACAATAAAGAAAAGAGGTGGTGTGCTCATCTTTATCCCt                                                                          >  2:431601/1‑140 (MQ=255)
                                                       caGCTTTAGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATc                                                                      >  2:554609/1‑140 (MQ=255)
                                                         gCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGTAAAGAGGTGGTTGGCTCCTCTTTATCCCTCATCgg                                                                    >  2:305182/1‑140 (MQ=255)
                                                         gCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCgg                                                                    >  1:901029/1‑140 (MQ=255)
                                                          cTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGa                                                                   <  1:607932/140‑1 (MQ=255)
                                                               gCTGGAGCGGAGCCATATCATTATCAGCCTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATg                                                              <  2:535792/140‑1 (MQ=255)
                                                                 tGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCg                                                            <  1:171791/140‑1 (MQ=255)
                                                                 tGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGACGCTGTTGCATATAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCg                                                            <  2:378719/140‑1 (MQ=255)
                                                                 tGGAGCGGAGCCATAACATTATCAGTTTTATCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCg                                                            <  1:419507/140‑1 (MQ=255)
                                                                   gagcggagcCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGa                                                          <  1:155270/140‑1 (MQ=255)
                                                                    agcggagcCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGaa                                                         >  1:7027/1‑140 (MQ=255)
                                                                    agcggagcCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGaa                                                         >  2:64436/1‑140 (MQ=255)
                                                                    agcggagcCATATCAGTATCAGCTTATTCTCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGaa                                                         <  1:343953/140‑1 (MQ=255)
                                                                     gcggagcCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAGCGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGaaa                                                        <  1:932698/140‑1 (MQ=255)
                                                                     gcggagcCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGaaa                                                        <  2:986383/140‑1 (MQ=255)
                                                                      cggagcCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGCTTGCTCAGCTTGATTCCTCATGGGAAAATGCGGAAAt                                                       >  1:281640/1‑140 (MQ=255)
                                                                         agcCATATCATTATCAGTTTTTTCCCGTCGCAGTTACATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAg                                                    <  2:281640/140‑1 (MQ=255)
                                                                             atatCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATa                                                <  1:64436/140‑1 (MQ=255)
                                                                                   ttATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTGc                                          >  2:532490/1‑140 (MQ=255)
                                                                                   ttATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTGc                                          >  1:968224/1‑140 (MQ=255)
                                                                                   ttATCAGATTTTTGCCGTGGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTGc                                          <  2:968224/140‑1 (MQ=255)
                                                                                     aTCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGaaa                                                        <  2:860861/124‑1 (MQ=255)
                                                                                     aTCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGaaa                                                        >  1:860861/1‑124 (MQ=255)
                                                                                     aTCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCa                                                  >  2:212144/1‑130 (MQ=255)
                                                                                     aTCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCa                                                  <  1:212144/130‑1 (MQ=255)
                                                                                     aTCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTGCCa                                        >  1:10971/1‑140 (MQ=255)
                                                                                           tttttCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTGCCAGTTATg                                  <  2:879626/140‑1 (MQ=255)
                                                                                           tttttCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTGCCAGTTATg                                  <  2:10971/140‑1 (MQ=255)
                                                                                                    tCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTGCCAGTTATg                                  <  1:889569/131‑1 (MQ=255)
                                                                                                    tCGCTGTTGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTGCCAGTTATg                                  >  2:889569/1‑131 (MQ=255)
                                                                                                           tGCATAAAACGAAACGATGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTGCCAGTTATGGTGTTGTCATCCGTcc                  <  2:901029/140‑1 (MQ=255)
                                                                                                                aaaaCGAAACGATGCTGCGAAGACACTTACGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTGCCAGTTATGGTGTTGTCATCCGTCCACCCt             <  1:431601/140‑1 (MQ=255)
                                                                                                                     gaaacgaTGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTGCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCa        <  2:7027/140‑1 (MQ=255)
                                                                                                                       aacgaTGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTGCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACt      >  2:160684/1‑140 (MQ=255)
                                                                                                                          gaTGCGGCGAAGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTAT‑CCTCATCGGAAAATGCGGAAATAAGCATACCCTGCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAAc  >  1:93318/1‑140 (MQ=255)
                                                                                                                                    |                                                                                                                                  
GCTGGCGCGAACGGCGATCGTTAATCGGTTTTTCCCGCTTGTTGCTCACCACCACCAGCTTTTGCTGGAGCGGAGCCATATCATTATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTGCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAAC  >  NC_000913/3605430‑3605692

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A