Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A19 F60 I1 R1
|
16 |
32.4 |
1191042 |
99.2% |
1181513 |
132.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,078,730 |
A→G |
intergenic (+292/‑561) |
yiiD → / → yiiE |
putative acetyltransferase YiiD/putative DNA‑binding transcriptional regulator YiiE |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,078,730 | 0 | A | G | 100.0%
| 268.5
/ NA
| 73 | intergenic (+292/‑561) | yiiD/yiiE | putative acetyltransferase YiiD/putative DNA‑binding transcriptional regulator YiiE |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (29/44); total (29/44) |
AGAACTGAGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGCTCTGTATGTTATGAATAATTATGTTGTATGTTTGCTCTTAAACCGTGGGAAGGAGGCTATAATGGTTGC > NC_000913/4078600‑4078856
|
aGAACTGAGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCa > 2:297852/1‑133 (MQ=255)
gAACTGAGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCaa < 1:107206/133‑1 (MQ=255)
gAGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAGTATTTTTCAAACCTATAGCTAGCAAAtatt > 1:169042/1‑133 (MQ=255)
aGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTTTAGCTAGCAAAtagta > 2:348364/1‑133 (MQ=255)
aGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAAtatta > 1:90398/1‑133 (MQ=255)
aGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAAtatta > 1:409109/1‑133 (MQ=255)
aGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAAtatta > 1:393652/1‑133 (MQ=255)
aGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAAtatta > 1:338717/1‑133 (MQ=255)
aGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAAtatta > 1:78307/1‑133 (MQ=255)
aGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAAtatta > 2:340945/1‑133 (MQ=255)
aGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAAtatta > 2:45192/1‑133 (MQ=255)
aGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAAtatta > 2:509758/1‑133 (MQ=255)
aGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAAtatta > 2:587176/1‑133 (MQ=255)
aGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAAAATTTTTAAAATCTACAGCTAGAAAAtatta > 1:238502/1‑133 (MQ=255)
aGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTGTTCTCATAAATATTTTGAAAATCTAGAGCTAGCAAAtatta > 2:187572/1‑133 (MQ=255)
aGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTATTCTCATAGATATTTTGAAAATCTAAAGCTAGCAAAtatta > 2:177236/1‑133 (MQ=255)
tGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATg > 1:96512/1‑133 (MQ=255)
gCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCa < 2:489950/133‑1 (MQ=255)
cAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCaa > 1:36798/1‑133 (MQ=255)
cAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATGTTTGATAGTCAAAACCCCCTCTAGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCaa > 2:356220/1‑133 (MQ=255)
ttgCAGATACAGCTTAATTCATCATCATAGTTTATGTTTGAACGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATaa < 2:292777/131‑1 (MQ=255)
gATAATGCCTAATTCCTCCTCTCAGTTCATATTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGAc < 1:155708/133‑1 (MQ=255)
tAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTa < 2:393652/133‑1 (MQ=255)
agCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATTCTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGca < 2:67434/132‑1 (MQ=255)
gCTTAATTCATCATCTTACTTCATGTTTGATCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGcat < 1:164039/133‑1 (MQ=255)
aTTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTg < 1:340945/133‑1 (MQ=255)
aTTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTg > 1:409584/1‑133 (MQ=255)
ttCATCATCTCAGTTTATGTTTGAACGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGt < 2:254208/133‑1 (MQ=255)
atcatcTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAg < 2:308857/133‑1 (MQ=255)
tcatcTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGt < 1:520875/133‑1 (MQ=255)
catcTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTa > 2:9591/1‑133 (MQ=255)
atcTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTAt < 1:492816/133‑1 (MQ=255)
tcTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTAtc < 2:574624/133‑1 (MQ=255)
aGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTAtcattc > 1:505919/1‑133 (MQ=255)
aGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTAtcattc < 1:301387/133‑1 (MQ=255)
aGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTAtcattc < 1:301384/133‑1 (MQ=255)
cATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATACTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCAttt > 1:478809/1‑133 (MQ=255)
aTGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTa < 2:505919/133‑1 (MQ=255)
aTGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTa < 1:9591/133‑1 (MQ=255)
aTGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTa < 1:587176/133‑1 (MQ=255)
gTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACt > 1:444898/1‑133 (MQ=255)
gTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACt < 2:134121/133‑1 (MQ=255)
gTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACt > 2:315388/1‑133 (MQ=255)
gTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACt < 2:90398/133‑1 (MQ=255)
gTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACt > 2:243047/1‑133 (MQ=255)
gTTTGAGCCATTTTTGATAGTCCAAACCCCATCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACt < 1:187572/133‑1 (MQ=255)
tttGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTTTAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTg < 1:348364/133‑1 (MQ=255)
tttGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTg < 1:45192/133‑1 (MQ=255)
ttGAGCGATTTTTGAAAGTAAAAACCCCCTCTGGTGCCATACTTTTTTCA‑AAAAAATTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGct < 1:343115/133‑1 (MQ=255)
tGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGct < 2:463301/133‑1 (MQ=255)
tGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGct < 1:511886/133‑1 (MQ=255)
gAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGctc < 1:315388/133‑1 (MQ=255)
gAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGctc > 1:590226/1‑133 (MQ=255)
cGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGCTCTGt < 2:516863/133‑1 (MQ=255)
tttttGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATTATTCATTTACTGCTCTGTATg < 2:409109/133‑1 (MQ=255)
gATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGCTCTGTATGTTATg < 2:10029/133‑1 (MQ=255)
gATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGCTCTGTATGTTATg < 1:243047/133‑1 (MQ=255)
tAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGCTCTGTATGTTATGaa < 1:141169/133‑1 (MQ=255)
cccccTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGCTCTGTATGTTATGAATAATTAtgt < 1:317654/133‑1 (MQ=255)
cccTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGCTCTGTATGTTATGAATAATTAtgttg < 2:376077/133‑1 (MQ=255)
ggTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGCTCTGTATGTTATGAATAATTATGTTGTATGtt < 2:307995/133‑1 (MQ=255)
gCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGCTCTGTATGTTATGAATAATTATGTTGTATGTTTGc > 1:112866/1‑133 (MQ=255)
aCTTTTCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGCTCTGTATGTTATGAATAATTATGTTGTATGTTTGCTCTTa < 2:36798/133‑1 (MQ=255)
ttCTCATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGCTCTGTATGTTATGAATAATTATGTTGTATGTTTGCTCTTAAAcc > 1:375975/1‑133 (MQ=255)
ctcATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGCTCTGTATGTTATGAATAATTATGTTGTATGTTTGCTCTTAAACCGt > 2:415787/1‑133 (MQ=255)
ctcATAAATATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGCTCTGTATGTTATGAATAATTATGTTGTATGTTTGCTCTTAAACCGt < 1:415787/133‑1 (MQ=255)
aaaTATTTTTAAAATCTATAGCTAGCAAATATAATGCAAAGCTAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGCTCTGTATGTTATGAATAATTATGTTGTATGTTTGCTCTTAAACCGTGGGaa < 2:238502/133‑1 (MQ=255)
aaTATTTTTATAATCAATAGCTAGCAAATATTCTGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGCTCTGTATGTTATGAATAATTATGTTGTATGTTTGCTCTTAAACCGTGGGAag < 2:169042/133‑1 (MQ=255)
aaTATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGCTCTGTATGTTATGAATAATTATGTTGTATGTTTGCTCTTAAACCGTGGGAag < 1:117378/133‑1 (MQ=255)
aaTATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGCTCTGTATGTTATGAATAATTATGTTGTATGTTTGCTCTTAAACCGTGGGAag < 1:297852/133‑1 (MQ=255)
aaTATTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCA‑TTACTGCTCTGTATGTTATGAATAATTATGTTGTATGTTTGCTCTTAAACCGTGGGAagg > 2:130822/1‑133 (MQ=255)
tatTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGCTCTGTATGTTATGAATAATTATGTTGTATGTTTGCTCTTAAACCGTGGGAagga < 1:356220/133‑1 (MQ=255)
tatTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGCTCTGTATGTTATGAATAATTATGTTGTATGTTTGCTCTTAAACCGTGGGAagga < 1:509758/133‑1 (MQ=255)
tatTTTTAAAATCTATAGCTAGCAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGCTCTGTATGTTATGAATAATTACGTTGTATGTTTGCTCTTAAACCGTGGGAagga < 2:409584/133‑1 (MQ=255)
tagctagcTAATATTCTGTAAACATAATGGTCTAGCATCATTGTCAGTATCATTCATTTACTGCTCTGTATGTTATGAATAATTATGTTGTATGTTTGCTCTTAAACCGTGGGAAGGAGGCTATAATGGTTGc < 1:173852/133‑1 (MQ=255)
tagctagcAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGCTCTGTATGTTATGAATAATTATGTTGTATGTTTGCTCTTAAACCGTGGGAAGGAGGCTATAATGGTTGc < 2:45409/133‑1 (MQ=255)
tagctagcAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGCTCTGTATGTTATGAATAATTATGTTGTATGTTTGCTCTTAAACCGTGGGAAGGAGGCTATAATGGTTGc < 1:313218/133‑1 (MQ=255)
tagctagcAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGCTCTGTATGTTATGAATAATTATGTTGTATGTTTGCTCTTAAACCGTGGGAAGGAGGCTATAATGGTTGc < 2:590226/133‑1 (MQ=255)
|
AGAACTGAGTGGCAATTATCGCAGATAATGCTTAATTCATCATCTTAGTTCATGTTTGAGCGATTTTTGATAGTCAAAACCCCCTCTGGTGCCATACTTTTCTCATAAATATTTTTAAAATCTATAGCTAACAAATATTATGCAAAGATAATGGACTAGCATCATTGTCAGTATCATTCATTTACTGCTCTGTATGTTATGAATAATTATGTTGTATGTTTGCTCTTAAACCGTGGGAAGGAGGCTATAATGGTTGC > NC_000913/4078600‑4078856
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
