Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A14 F48 I1 R1	75	141.5	4784044	99.1%	4740987	139.8

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	812,628	G→T	G120V (GGC→GTC)	bioD →	dethiobiotin synthetase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	812,628	0	G	T	100.0%	603.2 / NA	171	G120V (GGC→GTC)	bioD	dethiobiotin synthetase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (95/76); total (95/76)

Only 100 of 174 total aligned reads displayed.

TTACACCTTCGCAGAACCCACTTCGCCGCACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGGCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCACGCGATGTTGACTGCACAGGTAATACAA  >  NC_000913/812491‑812761

ttACACCTTCGCAGAACCCACTTCGCCGCACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCt                                                                                                                                     >  2:2327451/1‑140 (MQ=255)

 tACACCTTCGCAGAACCCACTTCGCCGCACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCtt                                                                                                                                    >  2:358172/1‑139 (MQ=255)

 tACACCTTCGCAGAACCCACTTCGCCGCACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTg                                                                                                                                    >  1:52679/1‑140 (MQ=255)

   cacCTTCGCAGAACCCACTTCGCCGCACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGt                                                                                                                                  >  1:2079069/1‑140 (MQ=255)

   cacCTTCGCAGAACCCACTTCGCCGCACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGt                                                                                                                                  >  1:1300474/1‑140 (MQ=255)

   cacCTTCGCAGAACCCACTTCGCCGCACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGt                                                                                                                                  >  1:888058/1‑140 (MQ=255)

        tCGCAGAACCCACTTCGCCGCACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTAcg                                                                                                                             >  1:1154492/1‑140 (MQ=255)

        tCGCAGAACCCACTTCGCCGCACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTAcg                                                                                                                             >  2:1509517/1‑140 (MQ=255)

        tCGCAGAACCCACTTCGCCGCACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTAcg                                                                                                                             >  2:195807/1‑140 (MQ=255)

        tCGCAGAACCCACTTCGCCGCACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTAcg                                                                                                                             >  1:1350839/1‑140 (MQ=255)

        tCGCAGAACCCACTTCGCCGCACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTAcg                                                                                                                             >  2:2125137/1‑140 (MQ=255)

        tCGCAGAACCCACTTCGCCGCACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTAcg                                                                                                                             >  1:1573861/1‑140 (MQ=255)

         cGCAGAACCCACTTCGCCGCACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTAcgc                                                                                                                            >  1:499843/1‑140 (MQ=255)

         cGCAGAACCCACTTCGCCGCACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGAAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGGGGAAGGTGCTGGCGTCTGGTTTAcgc                                                                                                                            >  2:1824126/1‑140 (MQ=255)

           cAGAACCCACTTCGCCGCACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTAcgctg                                                                                                                          >  1:25167/1‑138 (MQ=255)

                   aCTTCGCCGCACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTg                                                                                                                   >  2:1883171/1‑139 (MQ=255)

                   aCTTCGCCGCACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTg                                                                                                                   <  1:1883171/139‑1 (MQ=255)

                   aCTTCGCCGCACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGa                                                                                                                  >  2:125937/1‑140 (MQ=255)

                   aCTTCGCCGCACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGa                                                                                                                  >  2:2113080/1‑140 (MQ=255)

                   aCTTCGCCGCACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGa                                                                                                                  >  2:1546641/1‑140 (MQ=255)

                   aCTTCGCCGCACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGa                                                                                                                  >  1:625119/1‑140 (MQ=255)

                   aCTTCGCCGCACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGa                                                                                                                  >  1:1323897/1‑140 (MQ=255)

                       cgccgcACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCACTTTCTGAcact                                                                                                              <  1:554132/140‑1 (MQ=255)

                          cgcACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGAcactttc                                                                                                           >  2:243297/1‑140 (MQ=255)

                          cgcACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGAcactttc                                                                                                           >  1:308550/1‑140 (MQ=255)

                                tcatcaGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACtttt                                                                                                     <  1:1509517/140‑1 (MQ=255)

                                     aGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGa                                                                                                <  2:653088/140‑1 (MQ=255)

                                     aGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGa                                                                                                <  2:1049652/140‑1 (MQ=255)

                                     aGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGa                                                                                                <  1:2113080/140‑1 (MQ=255)

                                     aGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGa                                                                                                <  2:1323897/140‑1 (MQ=255)

                                       cgcgcAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGAtt                                                                                              >  2:1398954/1‑140 (MQ=255)

                                       cgcgcAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGAtt                                                                                              >  2:175191/1‑140 (MQ=255)

                                       cgcgcAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGAtt                                                                                              >  2:675580/1‑140 (MQ=255)

                                         cgcAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTgg                                                                                            >  1:2208/1‑140 (MQ=255)

                                         cgcAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTgg                                                                                            >  1:2352283/1‑140 (MQ=255)

                                         cgcAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTgg                                                                                            >  1:92109/1‑140 (MQ=255)

                                           cAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGt                                                                                          >  2:1180828/1‑140 (MQ=255)

                                           cAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGt                                                                                          >  1:173927/1‑140 (MQ=255)

                                            aaGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTa                                                                                         <  2:308550/140‑1 (MQ=255)

                                                gggCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAacac                                                                                     <  2:2044991/140‑1 (MQ=255)

                                                      aCCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGaac                                                                               <  1:1009640/140‑1 (MQ=255)

                                                      aCCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGaac                                                                               >  2:1439343/1‑140 (MQ=255)

                                                      aCCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGaac                                                                               >  1:1853950/1‑140 (MQ=255)

                                                        cGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGaacaa                                                                             <  2:1745105/140‑1 (MQ=255)

                                                          aTAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACt                                                                           <  2:1154492/140‑1 (MQ=255)

                                                              aaTCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCg                                                                       <  2:25167/140‑1 (MQ=255)

                                                              aaTCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCg                                                                       <  1:1180828/140‑1 (MQ=255)

                                                                tCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGt                                                                     <  2:2208/140‑1 (MQ=255)

                                                                acATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGt                                                                     <  2:173927/139‑1 (MQ=255)

                                                                  aTTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGa                                                                   <  2:2079069/140‑1 (MQ=255)

                                                                  aTTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGa                                                                   <  1:1870890/140‑1 (MQ=255)

                                                                    tGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATa                                                                 <  2:1611508/140‑1 (MQ=255)

                                                                    tGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATa                                                                 >  2:512777/1‑140 (MQ=255)

                                                                     ggTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATat                                                                >  2:179759/1‑139 (MQ=255)

                                                                     ggTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATAc                                                                >  1:372253/1‑140 (MQ=255)

                                                                     ggTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATAc                                                                <  2:888058/140‑1 (MQ=255)

                                                                        aaTGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTgg                                                             >  1:198543/1‑140 (MQ=255)

                                                                            aGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGt                                                         >  1:440639/1‑140 (MQ=255)

                                                                            aGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGt                                                         >  1:1750463/1‑140 (MQ=255)

                                                                              cgcCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTg                                                       >  1:1104083/1‑140 (MQ=255)

                                                                                ccGGATTCCGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGgt                                                     >  1:1565271/1‑140 (MQ=255)

                                                                                ccGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGgt                                                     >  1:2036798/1‑140 (MQ=255)

                                                                                ccGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGgt                                                     >  1:116030/1‑140 (MQ=255)

                                                                                ccGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGgt                                                     >  1:714464/1‑140 (MQ=255)

                                                                                 cGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGgtg                                                    <  2:1350839/140‑1 (MQ=255)

                                                                                        cgcgcgCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACt                                             >  2:263391/1‑140 (MQ=255)

                                                                                          cgcgcTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCg                                           <  2:116030/140‑1 (MQ=255)

                                                                                           gcgcTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCgg                                          <  1:1799993/140‑1 (MQ=255)

                                                                                            cgcTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGc                                         <  1:1043071/140‑1 (MQ=255)

                                                                                              cTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTg                                       >  2:492085/1‑140 (MQ=255)

                                                                                                       caGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCa                              >  1:125611/1‑140 (MQ=255)

                                                                                                       caGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCa                              >  2:1478973/1‑140 (MQ=255)

                                                                                                        aGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCAc                             <  1:1657384/140‑1 (MQ=255)

                                                                                                         ggCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCAcg                            <  2:1716413/140‑1 (MQ=255)

                                                                                                         ggCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCAcg                            >  2:1662376/1‑140 (MQ=255)

                                                                                                         ggCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCAcg                            >  2:604572/1‑140 (MQ=255)

                                                                                                          gCTGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCAcgc                           <  2:372253/140‑1 (MQ=255)

                                                                                                            tGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATc                               <  1:326824/134‑1 (MQ=255)

                                                                                                            tGACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCACGCGa                         >  1:202199/1‑140 (MQ=255)

                                                                                                             gACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCACGCGAt                        <  1:222231/140‑1 (MQ=255)

                                                                                                             gACTGGGTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCACGCGAt                        <  1:1439343/140‑1 (MQ=255)

                                                                                                                 gggTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCACGCGATGTTg                    >  2:897626/1‑140 (MQ=255)

                                                                                                                  ggTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCACGCGATGTTGa                   >  1:979609/1‑140 (MQ=255)

                                                                                                                  ggTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCACGCGATGTTGa                   <  2:646672/140‑1 (MQ=255)

                                                                                                                  ggTGTTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCACGCGATGTTGa                   <  2:1565271/140‑1 (MQ=255)

                                                                                                                   gtgtTAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGATTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCACGCGATGTTGAc                  <  1:629255/140‑1 (MQ=255)

                                                                                                                      ttAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCACGCGATGTTGACTGc               <  2:1794738/140‑1 (MQ=255)

                                                                                                                      ttAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCACGCGATGTTGACTGc               <  1:1769475/140‑1 (MQ=255)

                                                                                                                      ttAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCACGCGATGTTGACTGc               <  2:1853950/140‑1 (MQ=255)

                                                                                                                      ttAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCACGCGATGTTGACTGc               <  2:757320/140‑1 (MQ=255)

                                                                                                                       tAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCACGCGATGTTGACTGca              <  2:198543/140‑1 (MQ=255)

                                                                                                                       tAGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCACGCGATGTTGACTGca              <  2:90787/140‑1 (MQ=255)

                                                                                                                        aGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCACGCGATGTTGACTGcac             >  1:949693/1‑140 (MQ=255)

                                                                                                                        aGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCACGCGATGTTGACTGcac             <  2:125611/140‑1 (MQ=255)

                                                                                                                        aGTGGAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCACGCGATGTTGACTGcac             >  1:1791941/1‑140 (MQ=255)

                                                                                                                           ggAAGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCACGCGATGTTGACTGCACAgg          <  1:1398954/140‑1 (MQ=255)

                                                                                                                             aaGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCACGCGATGTTGACTGCACAGGTa        >  2:943979/1‑140 (MQ=255)

                                                                                                                              aGGTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCACGCGATGTTGACTGCACAGGTaa       >  1:50574/1‑140 (MQ=255)

                                                                                                                                gTGCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCGCTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCACGCGATGTTGACTGCACAGGTAATa     >  1:1449254/1‑140 (MQ=255)

                                                                                                                                  gCTGGCGTCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCACGCGATGTTGACTGCACAGGTAATaca   <  2:2036798/140‑1 (MQ=255)

TTACACCTTCGCAGAACCCACTTCGCCGCACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGGCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCACGCGATGTTGACTGCACAGGTAATACAA  >  NC_000913/812491‑812761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A