Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A7 F48 I1 R1	508	125.6	4303852	99.2%	4269421	139.6

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	812,883	C→A	P205H (CCC→CAC)	bioD →	dethiobiotin synthetase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	812,883	0	C	A	100.0%	523.2 / NA	151	P205H (CCC→CAC)	bioD	dethiobiotin synthetase
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (72/79); total (72/79)

Only 100 of 152 total aligned reads displayed.

ACAGGTAATACAACACGCCGGACTGACTCTGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCCCTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTGCGAGCGAGATCGCGTCTTCGATTGACTGCAATTTAACCAATTAAATTC  >  NC_000913/812749‑813018

acaGGTAATACAACACGCCGGACTGACTCTGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGc                                                                                                                                    >  1:1237480/1‑140 (MQ=255)

acaGGTAATACAACACGCCGGACTGACTCTGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGc                                                                                                                                    >  1:1461063/1‑140 (MQ=255)

      aaTACAACACGCCGGACTGACTCTGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAg                                                                                                                              <  1:497691/140‑1 (MQ=255)

       aTACAACACGCCGGACTGACTCTGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGa                                                                                                                             <  2:1132155/140‑1 (MQ=255)

       aTACAACACGCCGGACTGACTCTGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGa                                                                                                                             <  2:1556304/140‑1 (MQ=255)

            acacGCCGGACTGACTCTGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATc                                                                                                                        >  2:1448229/1‑140 (MQ=255)

             cacGCCGGACTGACTCTGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATcc                                                                                                                       >  2:721041/1‑140 (MQ=255)

              acGCCGGACTGACTCTGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCa                                                                                                                      >  1:1970622/1‑140 (MQ=255)

              acGCCGGACTGACTCTGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCa                                                                                                                      >  2:45465/1‑140 (MQ=255)

              acGCCGGACTGACTCTGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCa                                                                                                                      >  2:68012/1‑140 (MQ=255)

              acGCCGGACTGACTCTGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCa                                                                                                                      >  1:88039/1‑140 (MQ=255)

              acGCCGGACTGACTCTGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCa                                                                                                                      >  2:227178/1‑140 (MQ=255)

              acGCCGGACTGACTCTGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCa                                                                                                                      >  2:2096602/1‑140 (MQ=255)

              acGCCGGACTGACTCTGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCa                                                                                                                      >  2:1363710/1‑140 (MQ=255)

              acGCCGGACTGACTCTGGCGGGATGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCa                                                                                                                      >  2:1541921/1‑140 (MQ=255)

               cGCCGGACTGACTCTGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATTTATGACCACGCTCACCCGCAGGATTCCCGCGCCTCTGCTGGGAGTGATCTACTGGCTTGCAGAAAATCCaa                                                                                                                     >  2:75870/1‑139 (MQ=255)

                gCCGGACTGACTCTGGCGGGTTGGTTGGCGAACGATGGTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGa                                                                                                                    >  1:2021494/1‑140 (MQ=255)

                  cGGACTGACTCTGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGaaa                                                                                                                  >  1:1847459/1‑140 (MQ=255)

                  cGGACTGACTCTGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGaaa                                                                                                                  >  2:1635279/1‑140 (MQ=255)

                  cGGACTGACTCTGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGaaa                                                                                                                  >  2:1937976/1‑140 (MQ=255)

                     actgactCTGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATg                                                                                                               >  2:1945157/1‑140 (MQ=255)

                     actgactCTGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATg                                                                                                               >  2:1999531/1‑140 (MQ=255)

                        gactCTGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCgg                                                                                                            <  1:1170290/140‑1 (MQ=255)

                         actCTGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCTCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGc                                                                                                           >  2:859823/1‑140 (MQ=255)

                         actCTGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGc                                                                                                           <  1:710609/140‑1 (MQ=255)

                           tctGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCaa                                                                                                         <  1:2033430/140‑1 (MQ=255)

                           tctGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCaa                                                                                                         <  1:752496/140‑1 (MQ=255)

                              ggCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCg                                                                                                      >  1:243956/1‑140 (MQ=255)

                               gCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCgg                                                                                                     >  2:136879/1‑140 (MQ=255)

                                cGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGa                                                                                                    <  1:985879/140‑1 (MQ=255)

                                 gggTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCGCGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGaa                                                                                                   <  1:1733259/140‑1 (MQ=255)

                                 gggTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGaa                                                                                                   <  2:1258926/140‑1 (MQ=255)

                                 gggTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGaa                                                                                                   <  2:593215/140‑1 (MQ=255)

                                 gggTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGaa                                                                                                   <  1:721041/140‑1 (MQ=255)

                                 gggTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGGCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGaa                                                                                                   <  1:2080280/140‑1 (MQ=255)

                                  ggTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGaaa                                                                                                  <  2:405571/140‑1 (MQ=255)

                                   gTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAg                                                                                                 <  1:1937976/140‑1 (MQ=255)

                                    ttGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCGACCGGAAAGt                                                                                                >  2:112342/1‑140 (MQ=255)

                                    ttGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGt                                                                                                >  2:1763141/1‑140 (MQ=255)

                                       ggTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACa                                                                                             <  1:55639/140‑1 (MQ=255)

                                       ggTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACa                                                                                             <  1:579516/140‑1 (MQ=255)

                                         tGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATa                                                                                           <  1:617782/140‑1 (MQ=255)

                                             gAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAAcc                                                                                       <  1:1035913/140‑1 (MQ=255)

                                                  aTGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAAccttgcc                                                                                  <  1:1635279/140‑1 (MQ=255)

                                                  aTGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAAccttgcc                                                                                  <  1:1003130/140‑1 (MQ=255)

                                                  aTGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAAccttgcc                                                                                  <  2:92361/140‑1 (MQ=255)

                                                  aTGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAAccttgcc                                                                                  <  2:1219616/140‑1 (MQ=255)

                                                  aTGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAAccttgcc                                                                                  <  2:1221154/140‑1 (MQ=255)

                                                  aTGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAAccttgcc                                                                                  <  2:1457697/140‑1 (MQ=255)

                                                  aTGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAAccttgcc                                                                                  <  1:533847/140‑1 (MQ=255)

                                                  aTGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAAccttgcc                                                                                  <  2:243956/140‑1 (MQ=255)

                                                  aTGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAAccttgcc                                                                                  <  1:490132/140‑1 (MQ=255)

                                                  aTGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAAccttgcc                                                                                  <  1:274995/140‑1 (MQ=255)

                                                        cGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCCCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCttgttg                                                                            <  1:75870/140‑1 (MQ=255)

                                                         gCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTtgttgt                                                                           <  2:734099/140‑1 (MQ=255)

                                                           cTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAg                                                                         <  1:738414/140‑1 (MQ=255)

                                                           cTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAg                                                                         <  2:1530730/140‑1 (MQ=255)

                                                           cTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAg                                                                         >  1:151631/1‑140 (MQ=255)

                                                           cTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAg                                                                         <  2:2102329/140‑1 (MQ=255)

                                                           cTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAg                                                                         <  1:658476/140‑1 (MQ=255)

                                                            tCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGc                                                                        <  1:401633/140‑1 (MQ=255)

                                                             ccGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATaaa                                                                                         >  2:979798/1‑122 (MQ=255)

                                                             ccGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATaaa                                                                                         <  1:979798/122‑1 (MQ=255)

                                                             ccGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGcc                                                                       <  1:798460/140‑1 (MQ=255)

                                                                     aCGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTa                                                               <  1:2147217/140‑1 (MQ=255)

                                                                     aCGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTa                                                               <  2:454827/140‑1 (MQ=255)

                                                                       gTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTAtt                                                             <  2:1992634/140‑1 (MQ=255)

                                                                       gTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTAtt                                                             <  1:1534797/140‑1 (MQ=255)

                                                                       gTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTAtt                                                             <  2:1825037/140‑1 (MQ=255)

                                                                            gCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGtt                                                        >  1:307151/1‑140 (MQ=255)

                                                                                 atatatGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAAtt                                                   <  2:2142126/140‑1 (MQ=255)

                                                                                  tatatGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTg                                                  >  2:1897834/1‑140 (MQ=255)

                                                                                     atGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTgcga                                               <  1:136879/140‑1 (MQ=255)

                                                                                          cACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCTACTGGCTTGCAGAAAATCCAGAAAAAGCGGCAACCGGAAAGTACCTAAACCTTGCCTTGTTGTAGCCCTTCAGTATTTGATCAAATTGccagcgag                                          >  2:810398/1‑140 (MQ=255)

                                                                                          cACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTgcgagcga                                           <  2:1292460/139‑1 (MQ=255)

                                                                                          cACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTgcgagcga                                           >  1:1292460/1‑139 (MQ=255)

                                                                                          cACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTGcgagcgag                                          >  1:1866798/1‑140 (MQ=255)

                                                                                          cACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTGcgagcgag                                          >  1:1537294/1‑140 (MQ=255)

                                                                                          cACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTGcgagcgag                                          >  2:2119472/1‑140 (MQ=255)

                                                                                          cACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTGcgagcgag                                          >  2:1488966/1‑140 (MQ=255)

                                                                                            cGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTGCGAGCGAGAt                                        >  1:2121409/1‑140 (MQ=255)

                                                                                            cGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTGCGAGCGAGAt                                        >  1:109349/1‑140 (MQ=255)

                                                                                             gCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTGCGAGCGAGATc                                       <  2:1237480/140‑1 (MQ=255)

                                                                                              cTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTGCGAGCGAGATcg                                      >  2:1954950/1‑140 (MQ=255)

                                                                                                      cATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTGCGAGCGAGATCGCGTCTTCg                              >  1:1426501/1‑140 (MQ=255)

                                                                                                      cATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTGCGAGCGAGATCGCGTCTTCg                              <  1:1897834/140‑1 (MQ=255)

                                                                                                      cATGATTCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTGCGAGCGAGATCGCGTCTTCg                              >  1:652116/1‑140 (MQ=255)

                                                                                                            tCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTGCGAGCGAGATCGCGTCTTCGATTGAc                        <  1:50592/140‑1 (MQ=255)

                                                                                                            tCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTGCGAGCGAGATCGCGTCTTCGATTGAc                        <  1:1758198/140‑1 (MQ=255)

                                                                                                            tCCCGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTGCGAGCGAGATCGCGTCTTCGATTGAc                        <  1:1560377/140‑1 (MQ=255)

                                                                                                             cccGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTGCGAGCGAGATCGCGTCTTCGATTGACt                       >  1:2113553/1‑140 (MQ=255)

                                                                                                             cccGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTGCGAGCGAGATCGCGTCTTCGATTGACt                       <  1:541475/140‑1 (MQ=255)

                                                                                                             cccGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTGCGAGCGAGATCGCGTCTTCGATTGACt                       <  2:568543/140‑1 (MQ=255)

                                                                                                              ccGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTGCGAGCGAGATCGCGTCTTCGATTGACTg                      <  2:1537294/140‑1 (MQ=255)

                                                                                                              ccGCGCCGCTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTGCGAGCGAGATCGCGTCTTCGATTGACTg                      <  1:1954950/140‑1 (MQ=255)

                                                                                                                   ccgcTGCTGGGAGAGATCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTGCGAGCGAGATCGCGTCTTCGATTGACTGCAAtt                 <  2:1866798/140‑1 (MQ=255)

                                                                                                                             gagagaTCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTGCGAGCGAGATCGCGTCTTCGATTGACTGCAATTTAACCAATTa       <  1:2145834/140‑1 (MQ=255)

                                                                                                                               gagaTCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTGCGAGCGAGATCGCGTCTTCGATTGACTGCAATTTAACCAATTaaa     <  2:912637/140‑1 (MQ=255)

                                                                                                                                agaTCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTGCGAGCGAGATCGCGTCTTCGATTGACTGCAATTTAACCAATTAAAt    >  2:1331915/1‑140 (MQ=255)

                                                                                                                                 gaTCCACTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTGCGAGCGAGATCGCGTCTTCGATTGACTGCAATTTAACCAATTAAAtt   >  2:383832/1‑140 (MQ=255)

ACAGGTAATACAACACGCCGGACTGACTCTGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCCCTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAGCCATTCTGTATTTGGTTAAATTGCGAGCGAGATCGCGTCTTCGATTGACTGCAATTTAACCAATTAAATTC  >  NC_000913/812749‑813018

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A