Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A15 F48 I1 R1 115 87.5 3003888 99.1% 2976853 139.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 500,023 A→T intergenic (‑50/‑102) aes ← / → gsk acetylesterase/inosine/guanosine kinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913500,0230AT100.0% 298.2 / NA 82intergenic (‑50/‑102)aes/gskacetylesterase/inosine/guanosine kinase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (51/31);  total (51/31)

GTAAATCCGGCTGAAGAGTATTCACAACGGTCTTCATTTCAGCAGAAATAAGGTCCAGAACAGGTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAAAATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGGTAAACGTAAATCCAAACAT  >  NC_000913/499889‑500157
                                                                                                                                      |                                                                                                                                      
gTAAATCCGGCTGAAGAGTATTCACAACGGTCTTCATTTCAGCAGAAATAAGGTCCAGAACAGGTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCg                                                                                                                                   <  1:54250/140‑1 (MQ=255)
gTAAATCCGGCTGAAGAGTATTCACAACGGTCTTCATTTCAGCAGAAATAAGGTCCAGAACAGGTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCg                                                                                                                                   <  2:1304099/140‑1 (MQ=255)
gTAAATCCGGCTGAAGAGTATTCACAACGGTCTTCATTTCAGCAGAAATAAGGTCCAGAACAGGTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCg                                                                                                                                   >  1:1433906/1‑140 (MQ=255)
 tAAATCCGGCTGAAGAGTATTCACAACGGTCTTCATTTCAGCAGAAATAAGGTCCAGAACAGGTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCgt                                                                                                                                  >  2:480174/1‑139 (MQ=255)
  aaaTCCGGCTGAAGAGTATTCACAACGGTCTTCATTTCAGCAGAAATAAGGTCCAGAACAGGTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGAt                                                                                                                                 <  1:1257352/140‑1 (MQ=255)
      ccGGCTGAAGAGTATTCACAACGGTCTTCATTTCAGCAGAAATAAGGTCCAGAACAGGTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCg                                                                                                                             <  1:1197575/140‑1 (MQ=255)
            gAAGAGTATTCACAACGGTCTTCATTTCAGCAGAAATAAGGTCCAGAACAGGTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCctgct                                                                                                                       <  2:995097/140‑1 (MQ=255)
                          aCGGTCTTCATTTCAGCAGAAATAAGGTCCAGAACAGGTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTgg                                                                                                         >  2:546770/1‑140 (MQ=255)
                           cGGTCTTCATTTCAGCAGAAATAAGGTCCAGAACAGGTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGc                                                                                                        <  2:201470/140‑1 (MQ=255)
                            ggTCTTCATTTCAGCAGAAATAAGGTCCAGAACAGGTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCt                                                                                                       >  2:1349371/1‑140 (MQ=255)
                            ggTCTTCATTTCAGCAGAAATAAGGTCCAGAACAGGTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCt                                                                                                       >  2:1233652/1‑140 (MQ=255)
                            ggTCTTCATTTCAGCAGAAATAAGGTCCAGAACAGGTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCt                                                                                                       >  2:296504/1‑140 (MQ=255)
                              tCTTCATTTCAGCAGAAATAAGGTCCAGAACAGGGAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGc                                                                                                     >  1:811376/1‑140 (MQ=255)
                                ttCATTTCAGCAGAAATAAGGTCCAGAACAGGTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGt                                                                                                   <  2:298379/140‑1 (MQ=255)
                                ttCATTTCAGCAGAAATAAGGTCCAGAACAGGTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGt                                                                                                   >  2:933160/1‑140 (MQ=255)
                                      tCAGCAGAAATAAGGTCCAGAACAGGTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTcgcg                                                                                             <  1:782075/140‑1 (MQ=255)
                                       cagcagAAATAAGGTCCAGAACAGGTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTcgcgc                                                                                            >  2:1390797/1‑140 (MQ=255)
                                        agcagAAATAAGGTCCAGAACAGGTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTcgcgcg                                                                                           >  1:684738/1‑140 (MQ=255)
                                           agAAATAAGGTCCAGAACAGGTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTc                                                                                        <  1:480174/140‑1 (MQ=255)
                                                   ggTCCAGAACAGGTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGa                                                                                <  2:432186/140‑1 (MQ=255)
                                                    gTCCAGAACAGGTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGAt                                                                               >  2:701195/1‑140 (MQ=255)
                                                       cAGAACAGGTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATtgt                                                                            >  1:932581/1‑140 (MQ=255)
                                                       cAGAACAGGTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATtgt                                                                            >  2:698374/1‑140 (MQ=255)
                                                       cAGAACAGGTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATtgt                                                                            >  1:268558/1‑140 (MQ=255)
                                                       cAGAACAGGTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATtgt                                                                            >  1:15281/1‑140 (MQ=255)
                                                         gAACAGGTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTgtgt                                                                          >  1:1368779/1‑140 (MQ=255)
                                                               gTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACAt                                                                    >  2:232846/1‑140 (MQ=255)
                                                               gTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACAt                                                                    >  1:563723/1‑140 (MQ=255)
                                                               gTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACAt                                                                    >  2:1360352/1‑140 (MQ=255)
                                                               gTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATCGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACAt                                                                    >  2:1234850/1‑140 (MQ=255)
                                                                     tgtttTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTcgccg                                                              <  1:701195/140‑1 (MQ=255)
                                                                     tgtttTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTcgccg                                                              <  1:698374/140‑1 (MQ=255)
                                                                     tgtttTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTcgccg                                                              >  2:1451432/1‑140 (MQ=255)
                                                                     tgtttTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTcgccg                                                              >  2:1480352/1‑140 (MQ=255)
                                                                     tgtttTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTcgccg                                                              >  2:186807/1‑140 (MQ=255)
                                                                     tgtttCCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTcgccg                                                              <  1:631972/140‑1 (MQ=255)
                                                                        tttCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTcg                                                                 <  2:1318829/134‑1 (MQ=255)
                                                                        tttCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTcg                                                                 >  1:1318829/1‑134 (MQ=255)
                                                                             ggCTTCATACAAAAACTCCTTTCAAATTACGGCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTa                                                      >  1:1395563/1‑140 (MQ=255)
                                                                               cTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAac                                                    <  2:1305948/140‑1 (MQ=255)
                                                                                  cATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAaccac                                                 >  2:387883/1‑140 (MQ=255)
                                                                                    tACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCAccc                                               <  1:1233652/140‑1 (MQ=255)
                                                                                    tACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCAccc                                               <  1:728570/140‑1 (MQ=255)
                                                                                           aCTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTaaaaa                                        <  2:1395563/140‑1 (MQ=255)
                                                                                            cTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGtt                                                       >  1:803837/1‑124 (MQ=255)
                                                                                            cTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGtt                                                       <  2:803837/124‑1 (MQ=255)
                                                                                            cTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAaac                                       >  1:720584/1‑140 (MQ=255)
                                                                                            cTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAaac                                       <  2:268558/140‑1 (MQ=255)
                                                                                               cTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAaacaac                                    >  2:486985/1‑140 (MQ=255)
                                                                                               cTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAaacaac                                    >  2:450508/1‑140 (MQ=255)
                                                                                               cTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAaacaac                                    >  1:668871/1‑140 (MQ=255)
                                                                                               cTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAaacaac                                    >  2:330674/1‑140 (MQ=255)
                                                                                                tttCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAAcc                                   >  2:1210016/1‑140 (MQ=255)
                                                                                                 ttCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCa                                  >  2:555800/1‑140 (MQ=255)
                                                                                                 ttCAAATTACGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCa                                  >  2:623648/1‑140 (MQ=255)
                                                                                                         aCGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAAttt                          >  2:452611/1‑140 (MQ=255)
                                                                                                         aCGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAAttt                          >  1:1467358/1‑140 (MQ=255)
                                                                                                          cGTCATTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTc                         <  1:933160/140‑1 (MQ=255)
                                                                                                              aTTGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCgt                     >  2:664259/1‑139 (MQ=255)
                                                                                                               ttGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGGt                    <  2:932581/140‑1 (MQ=255)
                                                                                                                tGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGGTa                   >  1:1467066/1‑140 (MQ=255)
                                                                                                                tGTAAGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGGTa                   <  2:1433906/140‑1 (MQ=255)
                                                                                                                    aGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGGTAAACg               <  2:720584/140‑1 (MQ=255)
                                                                                                                    aGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGGTAAACg               >  1:1351087/1‑140 (MQ=255)
                                                                                                                    aGGAACCACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGGTAAACg               <  2:15281/140‑1 (MQ=255)
                                                                                                                         ccACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGGTAAACGTAAAt          >  1:451794/1‑140 (MQ=255)
                                                                                                                         ccACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGGTAAACGTAAAt          <  2:668871/140‑1 (MQ=255)
                                                                                                                         ccACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGGTAAACGTAAAt          >  2:1402713/1‑140 (MQ=255)
                                                                                                                          cACTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGGTAAACGTAAATc         >  1:463513/1‑140 (MQ=255)
                                                                                                                            gagacaggAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCACGAAATTTCCCGGTAAACGTAAATCCa       <  2:1050261/133‑1 (MQ=255)
                                                                                                                            cTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGGTAAACGTAAATCCa       <  1:1480352/140‑1 (MQ=255)
                                                                                                                            cTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGGTAAACGTAAATCCa       >  2:624274/1‑140 (MQ=255)
                                                                                                                            cTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGGTAAACGTAAATCCa       >  1:181586/1‑140 (MQ=255)
                                                                                                                            cTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGGTAAACGTAAATCCa       <  1:232846/140‑1 (MQ=255)
                                                                                                                            cTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGGTAAACGTAAATCCa       <  2:1467358/140‑1 (MQ=255)
                                                                                                                            cTGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGGTAAACGTAAATCCa       >  2:1342944/1‑140 (MQ=255)
                                                                                                                             tGCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGGTAAACGTAAATCCaa      <  1:330674/140‑1 (MQ=255)
                                                                                                                              gCCATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAATCACCCGTAAAAACAACCATGAAATTTCCCGGTAAACGTAAATCCaaa     >  2:889430/1‑140 (MQ=255)
                                                                                                                                cATGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGGTAAACGTAAATCCAAACa   >  1:1299634/1‑140 (MQ=255)
                                                                                                                                 aTGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGGTAAACGTAAATCCAAACAt  >  2:336941/1‑140 (MQ=255)
                                                                                                                                 aTGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGGTAAACGTAAATCCAAACAt  >  1:457423/1‑140 (MQ=255)
                                                                                                                                 aTGAATATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGGTAAACGTAAATCCAAACAt  >  1:558235/1‑140 (MQ=255)
                                                                                                                                      |                                                                                                                                      
GTAAATCCGGCTGAAGAGTATTCACAACGGTCTTCATTTCAGCAGAAATAAGGTCCAGAACAGGTAGTTTGTTTTCCGGCTTCATACAAAAACTCCTTTCAAATTACGTCATTGTAAGGAACCACTGCCATGAAAATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGGTAAACGTAAATCCAAACAT  >  NC_000913/499889‑500157

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A