Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A7 F48 I1 R1	508	125.6	4303852	99.2%	4269421	139.6

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	500,138	G→T	G5V (GGT→GTT)	gsk →	inosine/guanosine kinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	500,138	0	G	T	100.0%	461.5 / NA	133	G5V (GGT→GTT)	gsk	inosine/guanosine kinase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (65/68); total (65/68)

Only 100 of 135 total aligned reads displayed.

TGTAAGGAACCACTGCCATGAAAATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGGTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCAAACGCTGGTCGATATTGAAGCGAAAGT  >  NC_000913/500001‑500273

tGTAAGGAACCACTGCCATGAAAATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGCCTCGCGCGCTCCCGTCAGATTCTGTTCACATTCGCCGTTCAGTTAACCAACCGTAAAAACAACCATGAAATTTCCCGTTa                                                                                                                                       >  2:466032/1‑140 (MQ=255)

 gTAAGGAACCACTGCCATGAAAATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTaa                                                                                                                                      >  2:22299/1‑140 (MQ=255)

  tAAGGAACCACTGCCATGAAAATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTaaa                                                                                                                                     >  1:540696/1‑140 (MQ=255)

      gAACCACTGCCATGAAAATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTa                                                                                                                                 <  1:1819226/140‑1 (MQ=255)

       aaCCACTGCCATGAAAATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTaa                                                                                                                                >  1:2035594/1‑140 (MQ=255)

       aaCCACTGCCATGAAAATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTaa                                                                                                                                >  1:1132639/1‑140 (MQ=255)

         ccACTGCCATGAAAATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAAt                                                                                                                              >  2:1764770/1‑140 (MQ=255)

         ccACTGCCATGAAAATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAAt                                                                                                                              >  1:969359/1‑140 (MQ=255)

          cACTGCCATGAAAATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATc                                                                                                                             >  2:1098192/1‑140 (MQ=255)

           aCTGCCATGAAAATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATcc                                                                                                                            >  1:859392/1‑140 (MQ=255)

            cTGCCATGAAAATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAAt                                                                                                                              <  1:1544130/137‑1 (MQ=255)

            cTGCCATGAAAATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAAt                                                                                                                              >  2:1544130/1‑137 (MQ=255)

            cTGCCATGAAAATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCa                                                                                                                           <  1:877007/140‑1 (MQ=255)

            cTGCCATGAAAATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCa                                                                                                                           >  1:669264/1‑140 (MQ=255)

            cTGCCATGAAAATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCa                                                                                                                           <  1:1773314/140‑1 (MQ=255)

            cTGCCATGAAAATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCa                                                                                                                           <  1:284460/140‑1 (MQ=255)

            cTGCCATGAAAATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCa                                                                                                                           >  2:920195/1‑140 (MQ=255)

            cTGCCATGAAAATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCa                                                                                                                           >  1:260623/1‑140 (MQ=255)

              gCCATGAAAATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCaaa                                                                                                                         <  1:1098192/140‑1 (MQ=255)

              gCCATGAAAATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCaaa                                                                                                                         <  2:745302/140‑1 (MQ=255)

              gCCATGAAAATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCaaa                                                                                                                         <  2:969359/140‑1 (MQ=255)

                 aTGAAAATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACAt                                                                                                                      >  1:1343020/1‑140 (MQ=255)

                    aaaaTGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCa                                                                                                                           >  1:1217318/1‑132 (MQ=255)

                    aaaaTGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCa                                                                                                                           <  2:1217318/132‑1 (MQ=255)

                              cccGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTaa                                                                                                         >  1:875147/1‑140 (MQ=255)

                                     gctgATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAacgcacg                                                                                                  <  2:260623/140‑1 (MQ=255)

                                     gctgATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAacgcacg                                                                                                  <  1:205622/140‑1 (MQ=255)

                                     gctgATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAacgcacg                                                                                                  <  2:1527644/140‑1 (MQ=255)

                                     gctgATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAacgcacg                                                                                                  <  2:1208009/140‑1 (MQ=255)

                                     gctgATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTACCCCGTAAacgcacg                                                                                                  <  2:692602/140‑1 (MQ=255)

                                       tgATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCTCCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCAcgcg                                                                                                <  1:1778583/140‑1 (MQ=255)

                                       tgATATTGAAACTGGCTGCGTCTCGCGCGATCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCAcgcg                                                                                                <  1:2025000/140‑1 (MQ=255)

                                            ttGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCg                                                                                           <  2:1896945/140‑1 (MQ=255)

                                                aaCTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCgctgc                                                                                       <  1:2090283/140‑1 (MQ=255)

                                                aaCTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCgctgc                                                                                       <  2:901848/140‑1 (MQ=255)

                                                 aCTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCgctgct                                                                                      >  1:1188262/1‑140 (MQ=255)

                                                   tGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTc                                                                                    >  2:1858001/1‑140 (MQ=255)

                                                    ggCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCa                                                                                   >  2:1017120/1‑140 (MQ=255)

                                                     gCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAg                                                                                  >  1:312033/1‑140 (MQ=255)

                                                     gCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAg                                                                                  <  2:859392/140‑1 (MQ=255)

                                                     gCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAg                                                                                  >  1:1576057/1‑140 (MQ=255)

                                                     gCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAg                                                                                  >  1:724745/1‑140 (MQ=255)

                                                     gCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAg                                                                                  >  1:498289/1‑140 (MQ=255)

                                                           tctcGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTc                                                                            >  2:1409023/1‑140 (MQ=255)

                                                               gcgcgcTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTccagc                                                                        >  2:242596/1‑140 (MQ=255)

                                                               gcgcgcTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTccagc                                                                        >  2:727572/1‑140 (MQ=255)

                                                                  cgcTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTccagccag                                                                     <  1:27353/140‑1 (MQ=255)

                                                                    cTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGaa                                                                   >  1:129908/1‑140 (MQ=255)

                                                                    cTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGaa                                                                   >  1:245023/1‑140 (MQ=255)

                                                                     tCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGaaa                                                                  >  1:1676613/1‑140 (MQ=255)

                                                                      cccGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGaaaa                                                                 >  2:27778/1‑140 (MQ=255)

                                                                            aGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAAc                                                           <  1:1855098/140‑1 (MQ=255)

                                                                                tgtgTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAgc                                                       <  2:1779815/140‑1 (MQ=255)

                                                                                tgtgTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAgc                                                       <  1:1962370/140‑1 (MQ=255)

                                                                                tgtgTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAgc                                                       <  1:242596/140‑1 (MQ=255)

                                                                                tgtgTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAgc                                                       <  1:920195/140‑1 (MQ=255)

                                                                                tgtgTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAgc                                                       <  2:1791520/140‑1 (MQ=255)

                                                                                tgtgTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAgc                                                       <  1:727572/140‑1 (MQ=255)

                                                                                 gtgtTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAgcg                                                      >  1:1683441/1‑140 (MQ=255)

                                                                                  tgtTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAgcgc                                                     <  2:875147/140‑1 (MQ=255)

                                                                                  tgtTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAgcgc                                                     <  1:1017120/140‑1 (MQ=255)

                                                                                  tgtTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAgcgc                                                     <  2:93094/140‑1 (MQ=255)

                                                                                  tgtTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAAGTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAgcgc                                                     >  1:1917777/1‑140 (MQ=255)

                                                                                    ttAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTg                                                   >  1:1778568/1‑140 (MQ=255)

                                                                                      aaCATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGcc                                                 <  2:1576057/140‑1 (MQ=255)

                                                                                      aaCATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGcc                                                 <  2:2035594/140‑1 (MQ=255)

                                                                                       aCATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCt                                                <  1:1959695/140‑1 (MQ=255)

                                                                                         aTTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTgg                                              <  1:899404/140‑1 (MQ=255)

                                                                                            cgccgcTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCCCGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTa                                           <  2:68780/140‑1 (MQ=255)

                                                                                            cgccgcTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTgg                                              <  2:2067339/137‑1 (MQ=255)

                                                                                            cgccgcTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTa                                           >  1:663025/1‑140 (MQ=255)

                                                                                                 gtCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTggg                                      <  2:976411/139‑1 (MQ=255)

                                                                                                  tCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGt                                     <  2:2061071/140‑1 (MQ=255)

                                                                                                    aGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTAt                                   <  2:861653/140‑1 (MQ=255)

                                                                                                            accCGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCaaa                           <  2:669264/140‑1 (MQ=255)

                                                                                                              ccGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCAAACg                         >  1:730192/1‑140 (MQ=255)

                                                                                                              ccGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCAAACg                         >  2:1742288/1‑140 (MQ=255)

                                                                                                              ccGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCAAACg                         >  2:436827/1‑140 (MQ=255)

                                                                                                              ccGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCAAACg                         >  2:281250/1‑140 (MQ=255)

                                                                                                              ccGTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCAAACg                         >  1:452417/1‑140 (MQ=255)

                                                                                                                gTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCAAACGCt                       >  2:437884/1‑140 (MQ=255)

                                                                                                                gTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCAAACGCt                       >  2:1805489/1‑140 (MQ=255)

                                                                                                                gTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCAAACGCt                       >  1:1720143/1‑140 (MQ=255)

                                                                                                                gTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCAAACGCt                       >  2:76889/1‑140 (MQ=255)

                                                                                                                gTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCAAACGCt                       >  1:126612/1‑140 (MQ=255)

                                                                                                                gTAAAAACAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCAAACGCt                       >  1:1210011/1‑140 (MQ=255)

                                                                                                                   aaaaCAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCAAACGCTGGt                    <  2:1683441/140‑1 (MQ=255)

                                                                                                                   aaaaCAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCAAACGCTGGt                    <  1:1533319/140‑1 (MQ=255)

                                                                                                                   aaaaCAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCAAACGCTGGt                    <  2:1210011/140‑1 (MQ=255)

                                                                                                                   aaaaCAACCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCAAACGCTGGt                    <  2:452417/140‑1 (MQ=255)

                                                                                                                     aacaacCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCaaa                           >  1:2118365/1‑131 (MQ=255)

                                                                                                                     aacaacCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCAAACGCTGGTCg                  >  2:656275/1‑140 (MQ=255)

                                                                                                                        aacCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCAAACGCTGGTCGatt               >  2:541165/1‑139 (MQ=255)

                                                                                                                        aacCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCAAACGCTGGTCGatt               >  2:274948/1‑139 (MQ=255)

                                                                                                                        aacCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCAAACGCTGGTCGata               >  2:1905574/1‑140 (MQ=255)

                                                                                                                         acCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCGGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCAAACGCTGGCCGatat              >  2:69894/1‑140 (MQ=255)

                                                                                                                         acCATGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCAAACg                         <  2:11438/129‑1 (MQ=255)

                                                                                                                             tGAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCAAACGCTGGTCGATATTGaa          >  1:2084684/1‑140 (MQ=255)

                                                                                                                              gAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCAAACGCTGGTCGATATTGAAg         <  2:1450615/140‑1 (MQ=255)

                                                                                                                              gAAATTTCCCGTTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCAAACGCTGGTCGATATTGAAg         <  2:498289/140‑1 (MQ=255)

TGTAAGGAACCACTGCCATGAAAATGCGATCCCGCCTGCTGATATTGAAACTGGCTGCGTCTCGCGCGCTCCCGTCAGATTGTGTTAACATTCGCCGCTCAGTTAACCACCCGTAAAAACAACCATGAAATTTCCCGGTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCAAACGCTGGTCGATATTGAAGCGAAAGT  >  NC_000913/500001‑500273

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A