Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F48 I1 R1
|
508 |
125.6 |
4303852 |
99.2% |
4269421 |
139.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
607,689 |
G→T |
intergenic (‑306/‑45) |
ybdK ← / → sokE |
carboxylate‑amine ligase/small RNA SokE |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 607,689 | 0 | G | T | 100.0%
| 358.6
/ NA
| 103 | intergenic (‑306/‑45) | ybdK/sokE | carboxylate‑amine ligase/small RNA SokE |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (52/51); total (52/51) |
Only 100 of 120 total aligned reads displayed.
AAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCGGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATGGTAGTCCCTTCTTCGCATGGAGG > NC_000913/607554‑607825
|
aagaaTTTTGACGATTGAATCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTg > 1:1399730/1‑140 (MQ=255)
aTTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTg < 2:777271/140‑1 (MQ=255)
tttGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGaa < 1:2081048/140‑1 (MQ=255)
gTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑ttt < 2:85836/140‑1 (MQ=255)
gTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑ttt < 2:599464/140‑1 (MQ=255)
gTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑ttt < 1:1527194/140‑1 (MQ=255)
aaTGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCa < 2:875510/139‑1 (MQ=255)
gCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGt < 1:2136123/140‑1 (MQ=255)
gCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGt < 1:740183/140‑1 (MQ=255)
aaaCGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTg < 2:322388/140‑1 (MQ=255)
aaCGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGa > 1:883484/1‑140 (MQ=255)
aaCGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGa > 1:1355410/1‑140 (MQ=255)
aCGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAg < 2:256921/140‑1 (MQ=255)
aCGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAg < 2:1103532/140‑1 (MQ=255)
cGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTTAGGTTTACTCTGAgg > 2:1352652/1‑140 (MQ=255)
gggTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGt < 1:801062/140‑1 (MQ=255)
tCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGAt > 1:19598/1‑140 (MQ=255)
cAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATg < 2:435668/140‑1 (MQ=255)
aGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGa > 2:83308/1‑140 (MQ=255)
ttGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAg < 2:771571/140‑1 (MQ=255)
gATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGGTTACTCTGAGGTCTGGAAAGATGAAGcc > 1:1344752/1‑140 (MQ=255)
aTTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGccc < 2:19598/140‑1 (MQ=255)
ttAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGcccc > 1:145575/1‑140 (MQ=255)
aaTGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAgg > 1:1787092/1‑140 (MQ=255)
gaggagTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGgaga > 1:1948328/1‑140 (MQ=255)
ggagTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGata > 2:499730/1‑140 (MQ=255)
gagTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTTAGGTTTAATCTGTGGTCTGGAAAGATGAAGCCCCAGGAGatat > 2:2049129/1‑140 (MQ=255)
gagTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGatat < 2:1693347/140‑1 (MQ=255)
gagTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGatat > 1:1256836/1‑140 (MQ=255)
agTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGGCTGGAAAGATGAAGCCCCAGGAGATAtt > 1:680441/1‑140 (MQ=255)
gagaAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGata < 1:535827/135‑1 (MQ=255)
agaAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGTCTGAAGCTTTTCGG‑TTTCAGGTTTTCTCTTAGGGCTTGAAAGATGAAACCCCAGGAGATAtttttt > 2:1427701/1‑137 (MQ=255)
agaAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTa > 1:337726/1‑140 (MQ=255)
agaAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTa > 1:1612444/1‑140 (MQ=255)
gaAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTAt < 2:883484/140‑1 (MQ=255)
gaAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTAt < 2:895975/140‑1 (MQ=255)
gaAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTAt < 1:1181223/140‑1 (MQ=255)
aaaGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTAt < 1:2049129/139‑1 (MQ=255)
aaGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATc < 2:1721446/140‑1 (MQ=255)
tCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAAc > 2:2116489/1‑140 (MQ=255)
ggACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCt < 1:167148/140‑1 (MQ=255)
gACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTg > 1:1061180/1‑140 (MQ=255)
gACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTg > 1:1362492/1‑140 (MQ=255)
cTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGGGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGcc > 2:1553917/1‑140 (MQ=255)
cTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTc < 2:1344752/140‑1 (MQ=255)
cTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTc < 2:1233217/140‑1 (MQ=255)
ataaataaACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCaaa < 2:832625/140‑1 (MQ=255)
ataaaCAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCg > 1:522300/1‑140 (MQ=255)
ataaaCAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCg < 2:1308755/140‑1 (MQ=255)
ataaaCAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCg < 2:1493657/140‑1 (MQ=255)
aaCAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTTAAGCTTTCCGGTTTTCAGG‑TTACTCTGAGGTTTGGAAAAATGTAGCCCCCTGAGATATTTCTTTTAACCCTTGGGCTGCCACTCCAAACCCCaaa > 2:611203/1‑139 (MQ=255)
aaCAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGTTTTCCGG‑TTTTAGGTTTTTTTTTAGGTCT‑GAAAGATGAAGCCCCCGGAGGTTTTTTTTTCAAACCTGGGGCTGCCATTCCAAACCCGAAct > 2:1216668/1‑139 (MQ=255)
aaCAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTTCGG‑TTTCAGGGTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGaaa > 2:512685/1‑139 (MQ=255)
aaCAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAAc > 2:616768/1‑140 (MQ=255)
aaCAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGGTTACTCTTAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTTTATTAACCCTGGGGCTGCCACTCCAAACCCGaaa > 2:1244995/1‑139 (MQ=255)
cAGCTATTTTGTTGAGGAAGGGTTAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACaa > 1:1751868/1‑140 (MQ=255)
cAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTTCGG‑TTTTTGGTTTACTTTGAGGGTTGGAAAGATGAAACCCAAGGAGAATTTTTTATCATCACTGGGGATGTCATTTCCAACACGaaaat > 2:84279/1‑137 (MQ=255)
cAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCATGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACaa > 1:1322248/1‑140 (MQ=255)
cAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCg < 2:1427403/135‑1 (MQ=255)
cAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGaa > 1:266571/1‑137 (MQ=255)
cAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACaa > 1:1818147/1‑140 (MQ=255)
cAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACaa > 1:1650384/1‑140 (MQ=255)
cAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACaa > 1:283465/1‑140 (MQ=255)
cAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACaa > 2:2017583/1‑140 (MQ=255)
cAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACaa > 1:464719/1‑140 (MQ=255)
cAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACaa > 1:947231/1‑140 (MQ=255)
cAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCTGGGGCCTGAAGCTTTTCGG‑TTTTAGGGTTACTCTGAGGGCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACaa > 2:1813460/1‑140 (MQ=255)
tATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTg < 1:535586/140‑1 (MQ=255)
tATTTTGTTGAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTg < 1:499730/140‑1 (MQ=255)
ttgttgAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATg < 2:1256836/140‑1 (MQ=255)
ttgttgAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATg < 2:1724676/140‑1 (MQ=255)
gttgAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATGGt < 1:612129/140‑1 (MQ=255)
ttgAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATGGTa < 2:1206046/140‑1 (MQ=255)
ttgAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCCG‑GTTCAGGTTTACTCTGAGGTCTGGGAAGATGAAGCCCCAGGAGAAATTTCTATCAACCCTCGGGCTGCCACCCCAAACCCGAACAAATTGGATGGtg > 2:1029835/1‑139 (MQ=255)
gAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATGGTAGt > 1:461288/1‑140 (MQ=255)
gAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATGGTAGt < 1:2116489/140‑1 (MQ=255)
gAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATGGTAGt > 2:593526/1‑140 (MQ=255)
gAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATGGTAGt < 1:2017583/140‑1 (MQ=255)
gAGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCCAACAATTTGGATGGTAGt > 2:1818908/1‑140 (MQ=255)
aGGAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATGGTAGTc > 1:589781/1‑140 (MQ=255)
gAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATGGTAGTccc < 1:1029835/140‑1 (MQ=255)
gAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATGGTAGTccc > 1:569249/1‑140 (MQ=255)
gAAGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATGGTAGTccc > 1:913635/1‑140 (MQ=255)
aGGGTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTTGATGGTAGTCCctt > 2:1511664/1‑140 (MQ=255)
gggTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATGGTAGTCCcttc > 1:1967994/1‑140 (MQ=255)
gggTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATGGTAGTCCcttc < 2:258221/140‑1 (MQ=255)
gTAAGATAACGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATGGTAGTCCcttctt < 1:338521/140‑1 (MQ=255)
aCGGCTGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATGGTAGTCCCTTCTTCGCATGGa < 2:337726/140‑1 (MQ=255)
cggctgGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATGGTAGTCCCTTCTTCGCATGGAg < 2:2085088/140‑1 (MQ=255)
cggctgGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATGGTAGTCCCTTCTTCGCATGGAg < 2:1751868/140‑1 (MQ=255)
cggctgGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATGGTAGTCCCTTCTTCGCATGGAg > 1:2136366/1‑140 (MQ=255)
cggctgGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGGCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATGGTAGTCCCTTCTTCGCATGGAg > 1:2036861/1‑140 (MQ=255)
aggctgGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATGGTAGTCCCTTCTTCGCATGGAg < 2:569249/139‑1 (MQ=255)
ggctgGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCATCCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATGGTAGTCCCTTCTTCGCATGGAgg < 1:1069745/140‑1 (MQ=255)
ggctgGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATGGTAGTCCCTTCTTCGCATGGAgg < 2:1948328/140‑1 (MQ=255)
ggctgGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATGGTAGTCCCTTCTTCGCATGGAgg < 2:1390551/140‑1 (MQ=255)
ggctgGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATGGTAGTCCCTTCTTCGCATGGAgg < 1:985915/140‑1 (MQ=255)
ggctgGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATGGTAGTCCCTTCTTCGCATGGAgg < 1:616768/140‑1 (MQ=255)
ggctgGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCCGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATGGTAGTCCCTTCTTCGCATGGAgg < 2:752159/140‑1 (MQ=255)
agcggGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATGGTAGTCCCTTCTTCGCATGGAgg < 2:261690/139‑1 (MQ=255)
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AAGAATTTTGACGATTGAGTCATGCAGAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCGGGTGCCTGAAGCTTTCCGG‑TTTCAGGTTTACTCTGAGGTCTGGAAAGATGAAGCCCCAGGAGATATTTCTATCAACCCTGGGGCTGCCACTCCAAACCCGAACAATTTGGATGGTAGTCCCTTCTTCGCATGGAGG > NC_000913/607554‑607825
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
