Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F48 I1 R1 508 125.6 4303852 99.2% 4269421 139.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 654,798 C→A A391S (GCG→TCG)  dcuC ← anaerobic C4‑dicarboxylate transporter DcuC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913654,7980CA100.0% 377.4 / NA 109A391S (GCG→TCG) dcuCanaerobic C4‑dicarboxylate transporter DcuC
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (51/58);  total (51/58)

Only 100 of 110 total aligned reads displayed.

ACCGGTACCGAGGTGCGTTTTACGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGAATCACCAATACCAGCATCAGGATGATACTCGCC  >  NC_000913/654662‑654934
                                                                                                                                        |                                                                                                                                        
aCCGGTACCGAGGTGCGTTTTACGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAGGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACgg                                                                                                                                       >  1:168135/1‑140 (MQ=255)
aCCGGTACCGAGGTGCGTTTTACGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACgg                                                                                                                                       >  2:1636857/1‑140 (MQ=255)
 ccGGTACCGAGGTGCGTTTTACGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACggg                                                                                                                                      <  1:848737/140‑1 (MQ=255)
   ggTACCGAGGTGCGTTTTACGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGtt                                                                                                                                    <  2:1118300/140‑1 (MQ=255)
   ggTACCGAGGTGCGTTTTACGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGtt                                                                                                                                    <  2:339703/140‑1 (MQ=255)
   ggTACCGAGGTGCGTTTTACGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGtt                                                                                                                                    <  2:1617808/140‑1 (MQ=255)
   ggTACCGAGGTGCGTTTTACGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGtt                                                                                                                                    >  2:2149077/1‑140 (MQ=255)
    gTACCGAGGTGCGTTTTACGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGAGATAGTCAAATACGACGTGTTa                                                                                                                                   >  1:1798652/1‑140 (MQ=255)
     tACCGAGGTGCGTTTTACGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGTGTTaa                                                                                                                                  <  2:1798652/140‑1 (MQ=255)
     tACCGAGGTGCGTTTTACGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTaa                                                                                                                                  <  2:1275516/140‑1 (MQ=255)
         gAGGTGCGTTTTACGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGcc                                                                                                                              >  2:801413/1‑140 (MQ=255)
          aGGTGCGTTTTACGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCg                                                                                                                             >  1:504992/1‑140 (MQ=255)
          aGGTGCGTTTTACGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGCTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCg                                                                                                                             >  1:1625020/1‑140 (MQ=255)
            gTGCGTTTTACGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGa                                                                                                                           >  1:1592928/1‑140 (MQ=255)
            gTGCGTTTTACGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGa                                                                                                                           >  2:235447/1‑140 (MQ=255)
             tGCGTTTTACGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGaa                                                                                                                          <  1:519870/140‑1 (MQ=255)
               cGTTTTACGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAaga                                                                                                                        >  1:1519147/1‑140 (MQ=255)
               cGTTTTACGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAaga                                                                                                                        >  1:1728186/1‑140 (MQ=255)
               cGTTTTACGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAaga                                                                                                                        >  2:335970/1‑140 (MQ=255)
               cGTTTTACGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAaga                                                                                                                        >  2:1338853/1‑140 (MQ=255)
               cGTTTTACGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAaga                                                                                                                        >  2:456245/1‑140 (MQ=255)
               cGTTTTACGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAaga                                                                                                                        >  2:788834/1‑140 (MQ=255)
                 ttttACGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGt                                                                                                                      >  2:1077185/1‑140 (MQ=255)
                     aCGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTgcgc                                                                                                                  <  1:456245/140‑1 (MQ=255)
                     aCGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTgcgc                                                                                                                  <  1:987774/140‑1 (MQ=255)
                     aCGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTgcgc                                                                                                                  <  2:1425683/140‑1 (MQ=255)
                      cGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGcc                                                                                                                 >  2:82486/1‑140 (MQ=255)
                         cTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGt                                                                                                              >  2:894140/1‑140 (MQ=255)
                          ttCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAttt                                                                                                             <  1:235447/140‑1 (MQ=255)
                           tCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGttt                                                                                                            <  2:1728186/140‑1 (MQ=255)
                            cAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTc                                                                                                           >  2:1419341/1‑140 (MQ=255)
                               aCGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCggg                                                                                                        <  1:335970/140‑1 (MQ=255)
                               aCGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCggg                                                                                                        <  1:2056771/140‑1 (MQ=255)
                                cGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGa                                                                                                       <  2:2113046/140‑1 (MQ=255)
                                  gCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGatc                                                                                                     <  2:1519147/140‑1 (MQ=255)
                                   cGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGatca                                                                                                    >  1:994799/1‑140 (MQ=255)
                                    gagaTCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGatcat                                                                                                   >  2:1944133/1‑140 (MQ=255)
                                     agaTCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGatcatc                                                                                                  <  1:82486/140‑1 (MQ=255)
                                       aTCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCAtctc                                                                                                >  1:1636000/1‑140 (MQ=255)
                                           tCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTcaaca                                                                                            >  2:794507/1‑140 (MQ=255)
                                                 tCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCa                                                                                      >  2:1387103/1‑140 (MQ=255)
                                                 tCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCa                                                                                      <  1:1960341/140‑1 (MQ=255)
                                                 tCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCa                                                                                      >  2:1379203/1‑140 (MQ=255)
                                                 tCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCa                                                                                      <  1:1284952/140‑1 (MQ=255)
                                                  cccGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCAt                                                                                     >  1:850171/1‑140 (MQ=255)
                                                  cccGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGGTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCAt                                                                                     >  1:2122482/1‑140 (MQ=255)
                                                   ccGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATa                                                                                    >  2:333655/1‑140 (MQ=255)
                                                           cGCAACGACAACG‑CAAAAAAGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGgcgc                                                                           <  1:539924/140‑1 (MQ=255)
                                                            gCAACGACTACGCCAGAAACGGGCGAAGGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGgcgc                                                                           <  2:168135/140‑1 (MQ=255)
                                                            gCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATGATCTCAACAAACGCATAAAACGgcgc                                                                           <  2:472929/140‑1 (MQ=255)
                                                             cAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCa                                                                          <  2:181014/140‑1 (MQ=255)
                                                             cAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCa                                                                          <  1:1849326/140‑1 (MQ=255)
                                                             cAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCa                                                                          <  1:788834/140‑1 (MQ=255)
                                                             cAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCa                                                                          <  2:1636000/140‑1 (MQ=255)
                                                             aaaCGACTACGCCAGGAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCa                                                                          <  2:1625020/139‑1 (MQ=255)
                                                                     aCGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGa                                                                  >  2:1981788/1‑140 (MQ=255)
                                                                       gCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAAc                                                                <  2:1534023/140‑1 (MQ=255)
                                                                            aaaCGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTc                                                           >  1:170653/1‑140 (MQ=255)
                                                                            aaaCGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTc                                                           >  1:1292825/1‑140 (MQ=255)
                                                                            aaaCGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTc                                                           >  1:773503/1‑140 (MQ=255)
                                                                                gggCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGa                                                       >  2:1190451/1‑140 (MQ=255)
                                                                                 ggCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGAc                                                      >  1:141876/1‑140 (MQ=255)
                                                                                 ggCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGAc                                                      >  2:1423273/1‑140 (MQ=255)
                                                                                 ggCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGAc                                                      >  2:869130/1‑140 (MQ=255)
                                                                                  gCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACt                                                     <  2:1382783/140‑1 (MQ=255)
                                                                                      aaGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTgccg                                                 <  2:1292825/140‑1 (MQ=255)
                                                                                       aGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTgccgc                                                >  2:2036576/1‑140 (MQ=255)
                                                                                           tACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGc                                            >  2:505252/1‑140 (MQ=255)
                                                                                                ccAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGt                                       >  1:1326954/1‑140 (MQ=255)
                                                                                                ccAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGt                                       >  2:2016834/1‑140 (MQ=255)
                                                                                                   aGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAg                                    >  1:423442/1‑140 (MQ=255)
                                                                                                    ggTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGa                                   <  2:1410211/140‑1 (MQ=255)
                                                                                                    ggTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGa                                   <  2:2122482/140‑1 (MQ=255)
                                                                                                    ggTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGa                                   <  1:728205/140‑1 (MQ=255)
                                                                                                    ggTTTGACGCCTGCAGCATC‑GGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGaa                                  <  1:1741769/140‑1 (MQ=255)
                                                                                                     gTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGaa                                  <  1:1338853/140‑1 (MQ=255)
                                                                                                     gTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGaa                                  >  1:852284/1‑140 (MQ=255)
                                                                                                     gTTTGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGaa                                  <  2:2082564/140‑1 (MQ=255)
                                                                                                        tGACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGAATCa                               >  2:2043272/1‑140 (MQ=255)
                                                                                                         gACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGAATCAc                              <  1:250515/140‑1 (MQ=255)
                                                                                                         gACGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGAATCAc                              >  2:1988430/1‑140 (MQ=255)
                                                                                                          aCGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGAATCAcc                             <  1:1423273/140‑1 (MQ=255)
                                                                                                          aCGCCTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGAATCAcc                             >  2:1210435/1‑140 (MQ=255)
                                                                                                              cTGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGAATCACCAATa                         >  1:562759/1‑140 (MQ=255)
                                                                                                               tGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGTCAGCATTGTCAGAATCACCAATAc                        <  1:1944133/140‑1 (MQ=255)
                                                                                                               tGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGAATCACCAATAc                        >  1:1032118/1‑140 (MQ=255)
                                                                                                               tGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGAATCACCAATAc                        <  2:850171/140‑1 (MQ=255)
                                                                                                               tGCAGCATCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGAATCACCAATAc                        <  1:1988430/140‑1 (MQ=255)
                                                                                                                   gcaTCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGAATCACCAATACCAGc                    <  1:79510/140‑1 (MQ=255)
                                                                                                                    caTCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGAATCACCAATACCAGCa                   <  1:1419341/140‑1 (MQ=255)
                                                                                                                     aTCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGAATCACCAATACCAGCAt                  <  1:869130/140‑1 (MQ=255)
                                                                                                                     aTCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGAATCACCAATACCAGCAt                  <  2:773503/140‑1 (MQ=255)
                                                                                                                     aTCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGAATCACCAATACCAGCAt                  <  1:1981788/140‑1 (MQ=255)
                                                                                                                     aTCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGAATCACCAATACCAGCAt                  <  1:1216718/140‑1 (MQ=255)
                                                                                                                     aTCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGAATCACCAATACCAGCAt                  <  2:852284/140‑1 (MQ=255)
                                                                                                                     aTCGGGATAGTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGAATCACCAATACCAGCAt                  <  1:2149077/140‑1 (MQ=255)
                                                                                                                     aTCGCGATAGCCAAATCCGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGAATCACCAATACCAGCAt                  <  1:1093044/140‑1 (MQ=255)
                                                                                                                              gTCAAATACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGAATCACCAATACCAGCATCAGgatgat         >  2:1010874/1‑140 (MQ=255)
                                                                                                                                   aTACGACGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGAATCACCAATACCAGCATCAGGATGATACTCg    >  2:2042778/1‑140 (MQ=255)
                                                                                                                                     acgacgGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGAATCACCAATACCAGCATCAGGATGATACTCGcc  <  1:2016834/140‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                        
ACCGGTACCGAGGTGCGTTTTACGACTTCAAACGGCGAGATCTTCGCCATCCCGGCAACCGCAACGACTACGCCAGAAACGGGCGAAAGGGTACGGCCAAGGTTTGACGCCTGCAGCATCGGGATAGTCAAATACGCCGGGTTAATGCCGGAAGAGTGCGCCAGTTTCGGGATCATCTCAACAAACGCATAAAACGGCGCATTGCCTGAACCGGTCGTGACTGCCGCCAGCATTGTCAGAATCACCAATACCAGCATCAGGATGATACTCGCC  >  NC_000913/654662‑654934

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A