Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A16 F48 I1 R1	61	131.2	4447032	99.1%	4407008	139.7

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	641,810	C→A	A20S (GCT→TCT)	uspG ←	universal stress protein G

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	641,810	0	C	A	100.0%	842.1 / NA	231	A20S (GCT→TCT)	uspG	universal stress protein G
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (110/121); total (110/121)

Only 100 of 233 total aligned reads displayed.

TTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATAATATTTATCCCTGATATTTGTCTGGTTCTT  >  NC_000913/641673‑641945

  cATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGAtttt                                                                                                                                     >  2:952560/1‑139 (MQ=255)

  cATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGAtttt                                                                                                                                     >  2:2032622/1‑139 (MQ=255)

  cATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTg                                                                                                                                     >  2:424300/1‑140 (MQ=255)

  cATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTg                                                                                                                                     >  2:1537293/1‑140 (MQ=255)

  cATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTg                                                                                                                                     <  1:1702426/140‑1 (MQ=255)

  cATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTg                                                                                                                                     >  1:1232182/1‑140 (MQ=255)

  cATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTg                                                                                                                                     <  1:1904581/140‑1 (MQ=255)

  cATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTg                                                                                                                                     >  1:747541/1‑140 (MQ=255)

   aTGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGt                                                                                                                                    <  2:713874/140‑1 (MQ=255)

     gTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCg                                                                                                                                  <  1:525199/140‑1 (MQ=255)

       tGCAGATGCTCTTCAAAACGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCt                                                                                                                                >  2:1270647/1‑140 (MQ=255)

         cAGATGCTCTTCAAAACGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCa                                                                                                                              >  1:804673/1‑140 (MQ=255)

         cAGATGCTCTTCAAAACGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCa                                                                                                                              >  2:960066/1‑140 (MQ=255)

           gATGCTCTTCAAAACGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAAt                                                                                                                            >  1:2121342/1‑140 (MQ=255)

            aTGCTCTTCAAAACGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAAtt                                                                                                                           >  1:1516535/1‑140 (MQ=255)

            aTGCTCTTCAAAACGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAAtt                                                                                                                           >  1:1078688/1‑140 (MQ=255)

              gCTCTTCAAAACGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTcc                                                                                                                         <  2:267747/140‑1 (MQ=255)

              gCTCTTCAAAACGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTcc                                                                                                                         >  1:1301786/1‑140 (MQ=255)

              gCTCTTCAAAACGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTcc                                                                                                                         <  1:1818909/140‑1 (MQ=255)

               ctctTCAAAACGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCa                                                                                                                        >  2:1858562/1‑140 (MQ=255)

               ctctTCAAAACGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCa                                                                                                                        >  1:1001345/1‑140 (MQ=255)

                 ctTCAAAACGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCAtt                                                                                                                      <  2:2214985/140‑1 (MQ=255)

                 ctTCAAAACGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCAtt                                                                                                                      >  2:166372/1‑140 (MQ=255)

                  ttCAAAACGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCAttt                                                                                                                     >  1:1593757/1‑140 (MQ=255)

                     aaaaCGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCaa                                                                                                                  <  2:889312/140‑1 (MQ=255)

                         cgacgCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATAc                                                                                                              <  2:61279/140‑1 (MQ=255)

                            cgCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATc                                                                                                           >  2:477419/1‑140 (MQ=255)

                            cgCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATc                                                                                                           >  1:1920896/1‑140 (MQ=255)

                            cgCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATc                                                                                                           >  1:1039188/1‑140 (MQ=255)

                            cgCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATc                                                                                                           >  1:377815/1‑140 (MQ=255)

                            cgCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATc                                                                                                           >  2:1572043/1‑140 (MQ=255)

                            cgCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATc                                                                                                           >  1:447848/1‑140 (MQ=255)

                                caTCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACt                                                                                                       <  2:1102435/140‑1 (MQ=255)

                                 aTCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCaa                                                                                                         >  2:1256615/1‑137 (MQ=255)

                                 aTCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCaa                                                                                                         <  1:1256615/137‑1 (MQ=255)

                                  tCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTgg                                                                                                     <  2:1039188/140‑1 (MQ=255)

                                    aGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCa                                                                                                   <  2:1920896/140‑1 (MQ=255)

                                    aGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCa                                                                                                   <  1:1858562/140‑1 (MQ=255)

                                     gCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCAt                                                                                                  <  2:1956306/140‑1 (MQ=255)

                                         cAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATg                                                                                              >  1:566110/1‑140 (MQ=255)

                                          aaaaCGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGa                                                                                             <  2:1516535/140‑1 (MQ=255)

                                          aaaaCGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGa                                                                                             <  2:377815/140‑1 (MQ=255)

                                          aaaaCGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGa                                                                                             <  1:172548/140‑1 (MQ=255)

                                          aaaaCGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGa                                                                                             <  2:1232182/140‑1 (MQ=255)

                                          aaaaCGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGa                                                                                             <  1:1117616/140‑1 (MQ=255)

                                           aaaCGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATgatgat                                                                                            >  2:1359915/1‑140 (MQ=255)

                                           aaaCGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGa                                                                                             <  1:965191/139‑1 (MQ=255)

                                           aaaCGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGAt                                                                                            <  2:432429/140‑1 (MQ=255)

                                            aaCGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGAtt                                                                                           <  2:969611/140‑1 (MQ=255)

                                            aaCGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGAtt                                                                                           <  1:1319623/140‑1 (MQ=255)

                                               ggTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTc                                                                                        <  2:1940939/140‑1 (MQ=255)

                                                gTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCt                                                                                       >  2:1053276/1‑140 (MQ=255)

                                                 tGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCtt                                                                                      <  2:1301786/140‑1 (MQ=255)

                                                 tGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCtt                                                                                      <  1:427964/140‑1 (MQ=255)

                                                  gCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTta                                                                                     >  1:1935461/1‑140 (MQ=255)

                                                       ctcaggctGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACAt                                                                                <  2:1805632/140‑1 (MQ=255)

                                                        tcaggctGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATa                                                                               <  2:447848/140‑1 (MQ=255)

                                                        tcaggctGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATa                                                                               >  1:1997891/1‑140 (MQ=255)

                                                        tcaggctGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATa                                                                               <  2:1343607/140‑1 (MQ=255)

                                                                gctgACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTtc                                                                       >  1:2067503/1‑140 (MQ=255)

                                                                gctgACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTtc                                                                       >  2:848033/1‑140 (MQ=255)

                                                                gctgACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTtc                                                                       >  1:1865266/1‑140 (MQ=255)

                                                                gctgACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTtc                                                                       >  2:1895022/1‑140 (MQ=255)

                                                                 ctgACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTtct                                                                      >  1:1773565/1‑140 (MQ=255)

                                                                  tgACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTtctc                                                                     <  1:1572043/140‑1 (MQ=255)

                                                                  tgACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTtctc                                                                     <  2:804673/140‑1 (MQ=255)

                                                                  tgACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTtctc                                                                     <  2:2004468/140‑1 (MQ=255)

                                                                  tgACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTtctc                                                                     <  1:2032622/140‑1 (MQ=255)

                                                                   gACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTcc                                                                    <  2:1593757/140‑1 (MQ=255)

                                                                      ccGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTg                                                                 >  1:921395/1‑140 (MQ=255)

                                                                          gtagtaCGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTaa                                                             >  1:235939/1‑140 (MQ=255)

                                                                           tagtaCGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAAt                                                            <  1:166372/140‑1 (MQ=255)

                                                                            agtaCGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATc                                                           <  1:952560/140‑1 (MQ=255)

                                                                              taCGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCAt                                                         >  2:2072835/1‑140 (MQ=255)

                                                                               aCGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATg                                                        <  1:848033/140‑1 (MQ=255)

                                                                                cGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGa                                                       >  1:2188231/1‑140 (MQ=255)

                                                                                   gAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACa                                                    >  1:1150598/1‑140 (MQ=255)

                                                                                       tAGATGAATAACTCCGTCAGCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATc                                                >  2:120225/1‑140 (MQ=255)

                                                                                         gATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTACATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCAt                                              >  1:1024254/1‑140 (MQ=255)

                                                                                          aTGAATAACTCCGTCATCCTGGGCGAGGAATTCAACGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCAtt                                             >  1:2168059/1‑140 (MQ=255)

                                                                                              aTAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGcc                                         <  1:673353/140‑1 (MQ=255)

                                                                                               tAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCa                                        >  1:894542/1‑140 (MQ=255)

                                                                                                aaCTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCAt                                       <  2:2121342/140‑1 (MQ=255)

                                                                                                aaCTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCAt                                       <  2:1988104/140‑1 (MQ=255)

                                                                                                aaCTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTACATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCAt                                       <  2:1024254/140‑1 (MQ=255)

                                                                                                 aCTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGc                                          >  1:275487/1‑136 (MQ=255)

                                                                                                       tCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATtata                                <  2:1690391/140‑1 (MQ=255)

                                                                                                       tCATCCTGGGCGAGGAATTCAACGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATtata                                <  2:2168059/140‑1 (MQ=255)

                                                                                                              gggCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATAATATTTa                         <  1:979811/140‑1 (MQ=255)

                                                                                                              gggCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATAATATTTa                         <  2:1811685/140‑1 (MQ=255)

                                                                                                               ggCGAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATAATATTTAt                        >  2:547612/1‑140 (MQ=255)

                                                                                                                  gAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATAATATTTATccc                     <  1:148744/140‑1 (MQ=255)

                                                                                                                  gAGGAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATAATATTTATccc                     <  2:719303/140‑1 (MQ=255)

                                                                                                                    ggAATTCAGCGTGGCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATAATATTTATCCCTg                   >  1:638670/1‑140 (MQ=255)

                                                                                                                                ggCGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATAATATTTATCCCTGATATTTGTCTgg       >  1:1423705/1‑140 (MQ=255)

                                                                                                                                  cGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATAATATTTATCCCTGATATTTGTCTGGtt     >  2:1873829/1‑140 (MQ=255)

                                                                                                                                  cGAACAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATAATATTTATCCCTGATATTTGTCTGGtt     >  2:2100313/1‑140 (MQ=255)

                                                                                                                                    aaCAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATAATATTTATCCCTGATATTTGTCTGGTTCt   >  1:973282/1‑140 (MQ=255)

                                                                                                                                     aCAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATAATATTTATCCCTGATATTTGTCTGGTTCtt  <  2:1406283/140‑1 (MQ=255)

                                                                                                                                     aCAGATTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATAATATTTATCCCTGATATTTGTCTGGTTCtt  <  2:235939/140‑1 (MQ=255)

TTCATGTTGCAGATGCTCTTCAAAACGACGCACATCAGCGGCAAAACGGTGCAGGCTCAGGCTGGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATAATATTTATCCCTGATATTTGTCTGGTTCTT  >  NC_000913/641673‑641945

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A