Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F48 I1 R1 66 101.5 3442112 98.9% 3404248 139.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 979,782 G→T A1153S (GCG→TCG)  mukB → chromosome partitioning protein MukB

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913979,7820GT100.0% 247.0 / NA 70A1153S (GCG→TCG) mukBchromosome partitioning protein MukB
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (41/29);  total (41/29)

AGCAGGTAGTGACCGCCAAAGCGGGCTGGTGTGCGGTGATGCGCATGGTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGGCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCAGTTCTTCGTGGCGGTTTATCAGCATCTGCGTGAACGTA  >  NC_000913/979648‑979917
                                                                                                                                      |                                                                                                                                       
aGCAGGTAGTGACCGCCAAAGCGGGCTGGTGTGCGGTGATGCGCATGGTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTa                                                                                                                                    <  1:707985/140‑1 (MQ=255)
       aGTGACCGCCAAAGCGGGCTGGTGTGCGGTGATGCGCATGGTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTgcgc                                                                                                                             <  2:8638/140‑1 (MQ=255)
        gTGACCGCCAAAGCGGGCTGGTGTGCGGTGATGCGCATGGTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCt                                                                                                                            <  2:1388254/140‑1 (MQ=255)
           aCCGCCAAAGCGGGCTGGTGTGCGGTGATGCGCATGGTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCg                                                                                                                         <  1:722550/140‑1 (MQ=255)
             cGCCAAAGCGGGCTGGTGTGCGGTGATGCGCATGGTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTc                                                                                                                       >  2:1285606/1‑140 (MQ=255)
               ccAAAGCGGGCTGGTGTGCGGTGATGCGCATGGTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCtt                                                                                                                     >  2:413693/1‑139 (MQ=255)
               ccAAAGCGGGCTGGTGTGCGGTGATGCGCATGGTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCtg                                                                                                                     >  1:1242245/1‑140 (MQ=255)
                   aGCGGGCTGGTGTGCGGTGATGCGCATGGTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCtggcgg                                                                                                                 <  1:313749/140‑1 (MQ=255)
                      gggCTGGTGTGCGGTGATGCGCATGGTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCtggcggtgg                                                                                                              <  1:1285606/140‑1 (MQ=255)
                       ggCTGGTGTGCGGTGATGCGCATGGTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCtggcggtggc                                                                                                             >  2:775936/1‑140 (MQ=255)
                       ggCTGGTGTGCGGTGATGCGCATGGTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCtggcggtggc                                                                                                             >  2:1533427/1‑140 (MQ=255)
                       ggCTGGTGTGCGGTGATGCGCATGGTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCtggcggtggc                                                                                                             >  1:668395/1‑140 (MQ=255)
                       ggCTGGTGTGCGGTGATGCGCATGGTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCtggcggtggc                                                                                                             <  2:1267225/140‑1 (MQ=255)
                       ggCTGGTGTGCGGTGATGCGCATGGTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCtggcggtggc                                                                                                             >  2:1012277/1‑140 (MQ=255)
                                gCGGTCATGCGCATGGTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGa                                                                                                    <  2:1052311/140‑1 (MQ=255)
                                      aTGCGCATGGTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTTCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCt                                                                                              >  1:1607186/1‑140 (MQ=255)
                                      aTGCGCATGGTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCt                                                                                              >  2:924723/1‑140 (MQ=255)
                                      aTGCGCATGGTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCt                                                                                              <  1:924723/140‑1 (MQ=255)
                                      aTGCGCATGGTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCt                                                                                              <  1:637210/140‑1 (MQ=255)
                                      aTGCGCATGGTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCt                                                                                              >  2:90536/1‑140 (MQ=255)
                                         cgcATGGTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTgcg                                                                                           >  2:760753/1‑140 (MQ=255)
                                           cATGGTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGcgcg                                                                                         <  1:862936/140‑1 (MQ=255)
                                              ggTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACg                                                                                      <  2:668395/140‑1 (MQ=255)
                                                tGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGtg                                                                                    >  2:1374735/1‑140 (MQ=255)
                                                   aaGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGtgctg                                                                                 >  2:1332150/1‑140 (MQ=255)
                                                        aaCGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCAt                                                                            >  2:898612/1‑140 (MQ=255)
                                                        aaCGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCAt                                                                            >  1:872408/1‑140 (MQ=255)
                                                        aaCGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCAt                                                                            >  2:1087109/1‑140 (MQ=255)
                                                          cGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGt                                                                          >  2:1433542/1‑140 (MQ=255)
                                                          cGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGt                                                                          >  2:204046/1‑140 (MQ=255)
                                                          cGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGt                                                                          >  2:877842/1‑140 (MQ=255)
                                                          cGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGt                                                                          >  2:907370/1‑140 (MQ=255)
                                                            gCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCg                                                                        >  1:688671/1‑140 (MQ=255)
                                                             cGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCgg                                                                       <  1:1087109/140‑1 (MQ=255)
                                                             cGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCgg                                                                       <  1:1332150/140‑1 (MQ=255)
                                                             cGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCgg                                                                       <  1:760753/140‑1 (MQ=255)
                                                             cGTTGAGCGCCACTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCgg                                                                       <  2:1607186/140‑1 (MQ=255)
                                                              gTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGa                                                                      <  1:877842/140‑1 (MQ=255)
                                                               ttGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCAt                                                                            <  1:1438369/133‑1 (MQ=255)
                                                               ttGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCAt                                                                            >  2:1438369/1‑133 (MQ=255)
                                                                                 gtcgtGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGat                                                   >  2:41805/1‑139 (MQ=255)
                                                                                   cgtGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCg                                                 >  2:1007772/1‑140 (MQ=255)
                                                                                     tGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTa                                               <  1:1374735/140‑1 (MQ=255)
                                                                                     tGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTa                                               <  1:204046/140‑1 (MQ=255)
                                                                                     tGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTa                                               <  1:775936/140‑1 (MQ=255)
                                                                                          tGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAAtt                                          >  1:494251/1‑140 (MQ=255)
                                                                                            gCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCa                                        >  1:583699/1‑140 (MQ=255)
                                                                                            gCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCa                                        >  2:359710/1‑140 (MQ=255)
                                                                                            gCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCa                                        >  2:1638665/1‑140 (MQ=255)
                                                                                            gCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCa                                        >  1:1669241/1‑140 (MQ=255)
                                                                                            gCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCa                                        >  2:249259/1‑140 (MQ=255)
                                                                                                      ccGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCAGTTCTTCGTg                              >  2:163043/1‑140 (MQ=255)
                                                                                                      ccGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCAGTTCTTCGTg                              >  2:58342/1‑140 (MQ=255)
                                                                                                      ccGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCAGTTCTTCGTg                              >  2:602136/1‑140 (MQ=255)
                                                                                                      ccGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCAGTTCTTCGTg                              >  1:464729/1‑140 (MQ=255)
                                                                                                       cGCTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCAGTTCTTCGTgg                             <  1:907370/140‑1 (MQ=255)
                                                                                                         cTGATGATTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCAGTTCTTCGTGGCg                           <  1:1433542/140‑1 (MQ=255)
                                                                                                          tgatgaTTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCAGTTCTTCGTGGCgg                          >  1:1595961/1‑140 (MQ=255)
                                                                                                           gatgatTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCAGTTCTTCGTGGCGGt                         <  2:688671/140‑1 (MQ=255)
                                                                                                            atgatTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCAGTTCTTCGTGGCGGtt                        >  1:137921/1‑140 (MQ=255)
                                                                                                               atTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCAGTTCTTCGTGGCGGTTTAt                     <  2:1397877/140‑1 (MQ=255)
                                                                                                               atTTGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCAGTTCTTCGTGGCGGTTTAt                     >  1:1151053/1‑140 (MQ=255)
                                                                                                                 ttGCGTTCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCAGTTCTTCGTGGCGGTTTATCa                   >  2:1204725/1‑140 (MQ=255)
                                                                                                                      ttCCATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCAGTTCTTCGTGGCGGTTTATCAGCATc              >  2:1046276/1‑140 (MQ=255)
                                                                                                                         cATGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCAGTTCTTCGTGGCGGTTTATCAGCATCTGc           <  2:1669241/140‑1 (MQ=255)
                                                                                                                          aTGTCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCAGTTCTTCGTGGCGGTTTATCAGCATCTGCg          <  2:464729/140‑1 (MQ=255)
                                                                                                                             tCGGATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCAGTTCTTCGTGGCGGTTTATCAGCATCTGCGTGa       <  1:1046276/140‑1 (MQ=255)
                                                                                                                                gATAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCAGTTCTTCGTGGCGGTTTATCAGCATCTGCGTGAACg    >  1:1224417/1‑140 (MQ=255)
                                                                                                                                 aTAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCAGTTCTTCGTGGCGGTTTATCAGCATCTGCGTGAACGt   >  1:692559/1‑140 (MQ=255)
                                                                                                                                  tAAGTCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCAGTTCTTCGTGGCGGTTTATCAGCATCTGCGTGAACGTa  <  1:1533427/140‑1 (MQ=255)
                                                                                                                                      |                                                                                                                                       
AGCAGGTAGTGACCGCCAAAGCGGGCTGGTGTGCGGTGATGCGCATGGTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGGCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCAGTTCTTCGTGGCGGTTTATCAGCATCTGCGTGAACGTA  >  NC_000913/979648‑979917

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A