Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A19 F48 I1 R1
|
83 |
81.6 |
2760494 |
99.1% |
2735649 |
139.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
515,521 |
C→A |
A85S (GCC→TCC) |
qmcA ← |
PHB domain‑containing protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 515,521 | 0 | C | A | 99.0%
| 350.5
/ ‑3.1
| 100 | A85S (GCC→TCC) | qmcA | PHB domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base A (51/48); total (51/49) |
| Fisher's exact test for biased strand distribution p-value = 4.90e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.17e-01 |
Only 100 of 101 total aligned reads displayed.
AGAGCATTTCGTCAAGTTCCATTGAACCCAGCACGGTACGGATGTTAGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGCGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACGGCACCACCAGACTGAGCCCCGGCTGTAACGT > NC_000913/515386‑515656
|
agagCATTTCGTCAAGTTCCATTGAACCCAGCACGGTACGGATGTTAGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCg > 2:1048214/1‑140 (MQ=255)
agCATTTCGTCAAGTTCCATTGAACCCAGCACGGTACGGATGTTAGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGAt > 2:770304/1‑140 (MQ=255)
cATTTCGTCAAGTTCCATTGAACCCAGCACGGTACGGATGTTAGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATgg > 1:807846/1‑140 (MQ=255)
tCGTCAAGTTCCATTGAACCCAGCACGGTACGGATGTTAGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAAc > 2:1267772/1‑140 (MQ=255)
tCGTCAAGTTCCATTGAACCCAGCACGGTACGGATGTTAGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAAc > 2:379090/1‑140 (MQ=255)
tCGTCAAGTTCCATTGAACCCAGCACGGTACGGATGTTAGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAAc > 1:1376679/1‑140 (MQ=255)
tCCATTGAACCCAGCACGGTACGGATGTTAGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGtt > 1:773563/1‑140 (MQ=255)
ttGAACCCAGCACGGTACGGATGTTAGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGCGTCGATGGTAACGTTGGCGTTATCt < 1:217876/140‑1 (MQ=255)
aCCCAGCACGGTACGGATGTTAGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCg > 2:668692/1‑140 (MQ=255)
cccAGCACGGTACGGATGTTAGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCga > 2:623119/1‑140 (MQ=255)
cccAGCACGGTACGGATGTTAGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCga > 1:1049082/1‑140 (MQ=255)
cccAGCACGGTACGGATGTTAGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGCTGGCGTTATCTTTCga > 2:108123/1‑140 (MQ=255)
aGCACGGTACGGATGTTAGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGAt < 1:492181/140‑1 (MQ=255)
aGCACGGTACGGATGTTAGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGAt > 2:1314045/1‑140 (MQ=255)
aGCACGGTACGGATGTTAGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGAt < 2:684073/140‑1 (MQ=255)
cACGGTACGGATGTTAGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATaa > 2:267461/1‑140 (MQ=255)
cACGGTACGGATGTTAGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATaa < 1:578388/140‑1 (MQ=255)
ggTACGGATGTTAGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACtt > 2:258865/1‑140 (MQ=255)
tACGGATGTTAGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTcc > 2:477079/1‑140 (MQ=255)
tACGGATGTTAGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTcc > 1:743835/1‑140 (MQ=255)
tACGGATGTTAGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTcc > 1:1163332/1‑140 (MQ=255)
aCGGATGTTAGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCt < 1:17679/140‑1 (MQ=255)
cGGATGTTAGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTg < 1:668692/140‑1 (MQ=255)
gATGTTAGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTggg < 1:943658/140‑1 (MQ=255)
gATGTTAGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTggg < 1:1267772/140‑1 (MQ=255)
tAGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAggg < 2:1263433/140‑1 (MQ=255)
aGTCATGGTCAGGTTGATGATCGCCGGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAgggt > 2:747959/1‑139 (MQ=255)
aGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAgggt > 2:110684/1‑139 (MQ=255)
aGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGa > 1:1259446/1‑140 (MQ=255)
aGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGa > 2:456718/1‑140 (MQ=255)
aGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGa > 2:809343/1‑140 (MQ=255)
aGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGCAACGTTGGCGTTATCTTTCGCGATAACTTCCTGGGAAGGGa > 1:636864/1‑140 (MQ=255)
cATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGatat > 2:1102647/1‑140 (MQ=255)
cATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGatat > 2:559992/1‑140 (MQ=255)
aTGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATc > 2:668662/1‑140 (MQ=255)
tGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCg > 1:252485/1‑140 (MQ=255)
aggTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCg < 2:33731/139‑1 (MQ=255)
ggTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGa > 1:862349/1‑140 (MQ=255)
cAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCa < 2:493788/140‑1 (MQ=255)
aGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCAc < 1:1107298/140‑1 (MQ=255)
ttGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTg < 2:903732/140‑1 (MQ=255)
ttGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTg < 2:1049082/140‑1 (MQ=255)
gatgatCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCt < 1:108123/140‑1 (MQ=255)
gatgatCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCt < 1:534640/140‑1 (MQ=255)
gatgatCGCCAGCTCCAGATTGCTGACTTCATAAGCAGCGCGCGGCGCGTCAATCACATGAATAAAGCACACGGAGTCGCTGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGACGGGATATCGAGCACTTGCt < 1:1297074/140‑1 (MQ=255)
aatgatCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTAGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCt < 2:282266/139‑1 (MQ=255)
atgatCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCt < 2:606787/139‑1 (MQ=255)
atgatCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCt > 1:606787/1‑139 (MQ=255)
tgatCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTcc > 1:1170304/1‑140 (MQ=255)
gatCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTTAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCca < 2:600433/140‑1 (MQ=255)
gatCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCca < 2:66472/140‑1 (MQ=255)
gatCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCca < 2:743835/140‑1 (MQ=255)
gatCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCca < 2:862349/140‑1 (MQ=255)
atCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCcat < 1:918479/140‑1 (MQ=255)
cGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCcatca > 2:1332404/1‑140 (MQ=255)
gCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTg < 2:596630/140‑1 (MQ=255)
aGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCtt < 1:770304/140‑1 (MQ=255)
cTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGAcc > 2:260114/1‑140 (MQ=255)
cTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGAcc > 1:1133209/1‑140 (MQ=255)
cTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGAcc > 1:158029/1‑140 (MQ=255)
cTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGAcc > 2:630059/1‑140 (MQ=255)
tGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCa > 1:883782/1‑140 (MQ=255)
tGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCa > 1:929465/1‑140 (MQ=255)
tGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCa < 1:258865/140‑1 (MQ=255)
aCTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAAt > 2:1291209/1‑140 (MQ=255)
cTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATg < 1:1048214/140‑1 (MQ=255)
cTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATg < 1:477079/140‑1 (MQ=255)
cTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATg < 1:623119/140‑1 (MQ=255)
ttCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGc > 2:847611/1‑140 (MQ=255)
aTAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGAt > 1:616580/1‑140 (MQ=255)
aTAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGAt > 1:687552/1‑140 (MQ=255)
cgcggcgcgTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACgg < 1:1291209/140‑1 (MQ=255)
cgcggcgcgTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACgg < 1:257019/140‑1 (MQ=255)
cgcggcgcgTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACgg < 1:379090/140‑1 (MQ=255)
cgcggcgcgTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACgg < 1:559992/140‑1 (MQ=255)
cgcggcgcgTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACgg < 2:616580/140‑1 (MQ=255)
cgcggcgcgTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACgg > 1:699024/1‑140 (MQ=255)
cgcggcgcgTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACgg < 1:734910/140‑1 (MQ=255)
cgcggcgcgTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACgg < 1:1102647/140‑1 (MQ=255)
cgcggcgcgTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACgg < 2:324901/140‑1 (MQ=255)
cgcggcgcgTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACgg < 2:291752/140‑1 (MQ=255)
agcggtgcgTCAATCAACTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACgg < 2:699024/139‑1 (MQ=255)
cggcgcgTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACGGca < 1:809343/140‑1 (MQ=255)
ggcgcgTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAATGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACGGcac > 2:210631/1‑140 (MQ=255)
cgcgTCAATCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACGGcacca > 1:1232815/1‑140 (MQ=255)
aaTCACCTTAAAAAAACACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACGGCACCACCAGAc < 1:843120/140‑1 (MQ=255)
aaTCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCTCTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACGGCACCACCAGAc < 2:1061788/140‑1 (MQ=255)
aaTCACCTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACGGCACCACCAGAc < 1:668662/140‑1 (MQ=255)
ccTGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACGGCACCACCAGACTGAGc < 2:1376679/140‑1 (MQ=255)
tGAATAAAGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACGGCACCACCAGACTGAGccc < 1:837641/140‑1 (MQ=255)
aaGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACGGCACCACCAGACTGAGCCCCGGCTg < 2:773563/140‑1 (MQ=255)
aGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACGGCACCACCAGACTGAGCCCCGGCTGt > 1:1230075/1‑140 (MQ=255)
aGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACGGCACCACCAGACTGAGCCCCGGCTGt < 2:209602/140‑1 (MQ=255)
aGCACACGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACGGCACCACCAGACTGAGCCCCGGCTGt > 1:695536/1‑140 (MQ=255)
cacaCGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACGGCACCACCAGACTGAGCCCCGGCTGTaa > 1:514638/1‑140 (MQ=255)
cacaCGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACGGCACCACCAGACTGAGCCCCGGCTGTaa > 1:1040558/1‑140 (MQ=255)
cacaCGGAGCCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACGGCACCACCAGACTGAGCCCCGGCTGTaa > 2:729536/1‑140 (MQ=255)
cacGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACGGCACCACCAGACTGAGCCCCGGCTGTAACg < 2:929465/140‑1 (MQ=255)
acGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACGGCACCACCAGACTGAGCCCCGGCTGTAACGt > 1:303782/1‑140 (MQ=255)
acGGAGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACGGCACCACCAGACTGAGCCCCGGCTGTAACGt > 1:796068/1‑140 (MQ=255)
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AGAGCATTTCGTCAAGTTCCATTGAACCCAGCACGGTACGGATGTTAGTCATGGTCAGGTTGATGATCGCCAGCTCCAGATTGCTGACTTCATAAGCCGCGCGCGGCGCGTCAATCACCTGAATAAAGCACACGGCGTCGATGGTAACGTTGGCGTTATCTTTCGAGATAACTTCCTGGGAAGGGATATCGAGCACTTGCTCCATCATATTGATCTTGCGACCAATGCGATCCATAAACGGCACCACCAGACTGAGCCCCGGCTGTAACGT > NC_000913/515386‑515656
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
