Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F48 I1 R1
|
56 |
123.4 |
4244010 |
99.1% |
4205813 |
139.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
644,511 |
C→A |
D165Y (GAC→TAC) |
rna ← |
RNase I |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 644,511 | 0 | C | A | 100.0%
| 344.4
/ NA
| 97 | D165Y (GAC→TAC) | rna | RNase I |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (45/52); total (45/52) |
TTCCCCAGCTTTTGGCAAAGGCGGCGTCAAAGTCACGGCGGCTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTCCGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTCCAGTGATAATCCGGTTTCCGGCGATGAACAC > NC_000913/644376‑644647
|
ttCCCCAGCTTTTGGCAAAGGCGGCGTCAAAGTCACGGCGGCTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGa > 1:253543/1‑140 (MQ=255)
tCCCCAGCTTTTGGCAAAGGCGGCGTCAAAGTCACGGCGGCTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGAt < 2:280437/140‑1 (MQ=255)
ccccAGCTTTTGGCAAAGGCGGCGTCAAAGTCACGGCGGCTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATc > 2:197141/1‑140 (MQ=255)
cccAGCTTTTGGCAAAGGCGGCGTCAAAGTCACGGCGGCTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCa > 1:1168475/1‑140 (MQ=255)
cTTTTGGCAAAGGCGGCGTCAAAGTCACGGCGGCTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAAcc > 2:859829/1‑140 (MQ=255)
cTTTTGGCAAAGGCGGCGTCAAAGTCACGGCGGCTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAAcc > 1:665754/1‑140 (MQ=255)
ttGGCAAAGGCGGCGTCAAAGTCACGACGGCTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCaaa > 2:1488520/1‑140 (MQ=255)
tGGCAAAGGCGGCGTCAAAGTCACGGCGGCTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAg > 1:1962771/1‑140 (MQ=255)
aaGGCGGCGTCAAAGTCACGGCGGCTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGc < 2:665754/140‑1 (MQ=255)
aaGGCGGCGTCAAAGTCACGGCGGCTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGc < 1:730259/140‑1 (MQ=255)
aGGCGGCGTCAAAGTCACGGCGGCTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCa < 1:200099/140‑1 (MQ=255)
aGGCGGCGTCAAAGTCACGGCGGCTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCa < 2:1031582/140‑1 (MQ=255)
aGGCGGCGTCAAAGTCACGGCGGCTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCa > 2:1733243/1‑140 (MQ=255)
aGGCGGCGTCAAAGTCACGGCGGCTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCa > 2:1918487/1‑140 (MQ=255)
aGGCGGCGTCAAAGTCACGGCGGCTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCa < 1:1313876/140‑1 (MQ=255)
gcgTCAAAGTCACGGCGGCTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCgtg < 1:1448457/140‑1 (MQ=255)
cgTCAAAGTCACGGCGGCTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCgtgt < 2:1168475/140‑1 (MQ=255)
cgTCAAAGTCACGGCGGCTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCgtgt < 1:251778/140‑1 (MQ=255)
cgTCAAAGTCACGGCGGCTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCgtgt > 2:727558/1‑140 (MQ=255)
aaaGTCACGGCGGCTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTgg < 1:299267/140‑1 (MQ=255)
aaaGTCACGGCGGCTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTgg < 1:1262305/140‑1 (MQ=255)
aGTCACGGCGGCTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCa < 2:253543/140‑1 (MQ=255)
ggcggcTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTct > 2:876735/1‑139 (MQ=255)
cggcTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTa < 2:695380/140‑1 (MQ=255)
cggcTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTa < 1:1248383/140‑1 (MQ=255)
cggcTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTa < 1:859829/140‑1 (MQ=255)
ggcTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAg < 1:1210583/140‑1 (MQ=255)
cTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGcc > 2:1006542/1‑139 (MQ=255)
cACTGTTTTGCCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGtt < 1:1796430/140‑1 (MQ=255)
cACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGtt < 2:496567/140‑1 (MQ=255)
cACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGtt < 2:271986/140‑1 (MQ=255)
cACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGtt < 1:1918487/140‑1 (MQ=255)
cACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGtt < 1:1984142/140‑1 (MQ=255)
aaCTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGtt < 2:1760915/139‑1 (MQ=255)
aCTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTc < 2:1585993/140‑1 (MQ=255)
tACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCcaggcag > 2:458982/1‑140 (MQ=255)
cGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGaa > 1:700146/1‑140 (MQ=255)
tAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACg < 1:1749051/140‑1 (MQ=255)
tAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACg > 1:557752/1‑140 (MQ=255)
aaTTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGt < 1:197141/140‑1 (MQ=255)
aTTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTc > 2:466587/1‑140 (MQ=255)
aTTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTc > 1:511925/1‑140 (MQ=255)
aTTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTc > 1:2088790/1‑140 (MQ=255)
tCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGcc < 1:1488520/140‑1 (MQ=255)
tCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGcc < 2:790679/140‑1 (MQ=255)
tCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGcc < 1:33973/140‑1 (MQ=255)
cGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAg < 2:694208/140‑1 (MQ=255)
cGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAg > 1:311670/1‑140 (MQ=255)
cAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACGGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCt < 1:514920/140‑1 (MQ=255)
cAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCt > 2:270031/1‑140 (MQ=255)
cAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCt > 1:797883/1‑140 (MQ=255)
aaTTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCATACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTgg < 2:1383555/140‑1 (MQ=255)
ttttCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCa < 2:271554/140‑1 (MQ=255)
ttttCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCa < 1:458982/140‑1 (MQ=255)
tttCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCAt < 1:1736698/140‑1 (MQ=255)
tCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGa < 2:729099/140‑1 (MQ=255)
tCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGa < 1:155884/140‑1 (MQ=255)
ccGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGAc < 2:2044034/140‑1 (MQ=255)
cGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACt < 2:859784/140‑1 (MQ=255)
cGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACt < 2:702527/140‑1 (MQ=255)
cGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACt < 2:2088790/140‑1 (MQ=255)
cTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCa > 1:1303516/1‑140 (MQ=255)
tCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACt > 1:1105198/1‑140 (MQ=255)
cGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACtt < 1:270031/140‑1 (MQ=255)
tttAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAg < 2:2106177/140‑1 (MQ=255)
aTTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGc > 1:655393/1‑140 (MQ=255)
tttCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGcc < 1:623033/140‑1 (MQ=255)
tttCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGcc < 2:1551373/140‑1 (MQ=255)
cTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCTGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGtt > 2:360830/1‑140 (MQ=255)
tGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTc > 2:1183158/1‑140 (MQ=255)
tGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTc < 2:511925/140‑1 (MQ=255)
tGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTc > 2:531079/1‑140 (MQ=255)
tGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTc > 2:641097/1‑140 (MQ=255)
tGATTCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTc < 1:466587/140‑1 (MQ=255)
tGATTCAGGCGTACCATCATACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTc > 1:1387231/1‑140 (MQ=255)
ttCAGGCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTCCAg < 2:700146/140‑1 (MQ=255)
gCGTACCATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTCCAGTGATa > 1:672374/1‑140 (MQ=255)
ccATCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTCCAGTGATAATCCg > 1:1583072/1‑140 (MQ=255)
aTCGTACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTCCAGTGATAATCCGGt < 2:1105198/140‑1 (MQ=255)
tACCGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTCCAGTGATAATCCGGTTTcc > 2:1175645/1‑140 (MQ=255)
ccGAAGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTCCAGTGATAATCCGGTTTCCgg > 1:688794/1‑140 (MQ=255)
aaGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTCCAGTGATAATCCGGTTTCCGGCgt > 2:1618356/1‑139 (MQ=255)
aaGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTCCAGTGATAATCCGGTTTCCGGCgt > 2:1873735/1‑139 (MQ=255)
aaGTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTCCAGTGATAATCCGGTTTCCGGCGa > 1:948038/1‑140 (MQ=255)
gTATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTCCAGTGATAATCCGGTTTCCGGCGATg < 1:1618356/140‑1 (MQ=255)
tATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTCCAGTGATAATCCGGTTTCCg > 2:1954087/1‑133 (MQ=255)
tATGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTCCAGTGATAATCCGGTTTCCg < 1:1954087/133‑1 (MQ=255)
aTGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTCCAGTGATAATCCGGTTTCCGGCGATGaa < 1:531079/140‑1 (MQ=255)
tGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTCCAGTGATAATCCGGTTTCCGGCGATGaa > 1:1360545/1‑139 (MQ=255)
tGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTCCAGTGATAATCCGGTTTCCGGCGATGaa < 2:1360545/139‑1 (MQ=255)
tGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTCCAGTGATAATCCGGTTTCCGGCGATGAac > 2:392512/1‑140 (MQ=255)
tGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTCCAGTGATAATCCGGTTTCCGGCGATGAac > 1:696357/1‑140 (MQ=255)
tGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTCCAGTGATAATCCGGTTTCCGGCGATGAac > 1:1436443/1‑140 (MQ=255)
tGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTCCAGTGATAATCCGGTTTCCGGCGATGAac > 1:347313/1‑140 (MQ=255)
tGCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTCCAGTGATAATCCGGTTTCCGGCGATGAac > 2:1040881/1‑140 (MQ=255)
gCGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTCCAGTGATAATCCGGTTTCCGGCGATGAaca > 1:998557/1‑140 (MQ=255)
cGTACGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTCCAGTGATAATCCGGTTTCCGGCGATGAacac > 1:1302427/1‑140 (MQ=255)
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TTCCCCAGCTTTTGGCAAAGGCGGCGTCAAAGTCACGGCGGCTCACTGTTTTACCGTAATTATCCGCAAGGAATTTTCCGGCTTCGCTCTCTTTAATTTCTTGATTCAGGCGTACCATCGTACCGAAGTATGCGTCCGGATCAAAACCAAAGCAGGCACCGTGTTTGGCATATTCGTAGCGTTCCAGGCAGGAACGTCCGCCAGCTCCTGGCATGACTTCACTTAGTTTAGCGGCCGTTTCCAGTGATAATCCGGTTTCCGGCGATGAACAC > NC_000913/644376‑644647
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
