Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A9 F48 I1 R1	82	50.4	1709896	99.0%	1692797	139.8

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	321,694	C→A	L29L (CTC→CTA)	ykgE →	putative lactate utilization oxidoreductase YkgE

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	321,694	0	C	A	100.0%	251.2 / NA	70	L29L (CTC→CTA)	ykgE	putative lactate utilization oxidoreductase YkgE
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (35/35); total (35/35)

GGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTCGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATCGCCGCACTGGAGGATAACGACGATCC  >  NC_000913/321559‑321822

ggggggAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCt                                                                                                                              >  1:238972/1‑140 (MQ=255)

  ggggAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGt                                                                                                                            >  1:446258/1‑140 (MQ=255)

  ggggAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGt                                                                                                                            >  2:687545/1‑140 (MQ=255)

        aCATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTa                                                                                                                      >  1:642343/1‑140 (MQ=255)

          aTCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTaaa                                                                                                                    >  2:835601/1‑140 (MQ=255)

          aTCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTaaa                                                                                                                    >  2:753453/1‑140 (MQ=255)

          aTCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGACACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTaaa                                                                                                                    >  1:489822/1‑140 (MQ=255)

            cGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAAtt                                                                                                                  >  2:409722/1‑140 (MQ=255)

                  tAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCgg                                                                                                            <  2:642343/140‑1 (MQ=255)

                   aaaTGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGga                                                                                                           <  1:409722/140‑1 (MQ=255)

                    aaTGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGgag                                                                                                          >  1:188232/1‑140 (MQ=255)

                                   aTGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGAtgctgc                                                                                           >  2:452826/1‑140 (MQ=255)

                                    tGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCg                                                                                          >  1:318828/1‑140 (MQ=255)

                                    tGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCg                                                                                          >  1:169403/1‑140 (MQ=255)

                                     ggAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCgg                                                                                         <  1:492095/140‑1 (MQ=255)

                                      gAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGt                                                                                        <  1:354093/140‑1 (MQ=255)

                                       aGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTc                                                                                       <  1:753453/140‑1 (MQ=255)

                                       aGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTc                                                                                       <  1:835601/140‑1 (MQ=255)

                                         tATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAg                                                                                     >  1:808970/1‑140 (MQ=255)

                                         tATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAg                                                                                     >  1:377607/1‑140 (MQ=255)

                                          aTTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGG‑TGCTGCGGTCAGcc                                                                                   >  2:709728/1‑140 (MQ=255)

                                           ttAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGcc                                                                                   >  1:356341/1‑140 (MQ=255)

                                           ttAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGG‑TGCTGCGGTCAGCCt                                                                                  <  1:709728/140‑1 (MQ=255)

                                               ttGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCg                                                                               <  2:377607/140‑1 (MQ=255)

                                               ttGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCg                                                                               <  2:842490/140‑1 (MQ=255)

                                                 gtgAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGAt                                                                             >  1:183877/1‑140 (MQ=255)

                                                   gAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCa                                                                           >  1:602838/1‑140 (MQ=255)

                                                     aTGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAAt                                                                         <  2:446258/140‑1 (MQ=255)

                                                      tGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATa                                                                        <  2:188232/140‑1 (MQ=255)

                                                        tCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGc                                                                      >  1:510092/1‑140 (MQ=255)

                                                          attttCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCgg                                                                    <  1:234079/138‑1 (MQ=255)

                                                          aaTTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCgg                                                                    <  1:135591/140‑1 (MQ=255)

                                                          aaTTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCgg                                                                    <  2:685850/140‑1 (MQ=255)

                                                           aTTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGt                                                                   <  1:140165/140‑1 (MQ=255)

                                                             ttCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTta                                                                 <  2:544253/140‑1 (MQ=255)

                                                                      aCCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAaaga                                                        >  2:432918/1‑140 (MQ=255)

                                                                         tGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGc                                                     <  1:527790/140‑1 (MQ=255)

                                                                         tGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGc                                                     <  1:455036/140‑1 (MQ=255)

                                                                              tGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTc                                                >  1:288291/1‑140 (MQ=255)

                                                                                gTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCa                                              <  1:687545/140‑1 (MQ=255)

                                                                                gTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCa                                              >  1:835532/1‑140 (MQ=255)

                                                                                gTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCa                                              <  1:452826/140‑1 (MQ=255)

                                                                                  gACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAgg                                            >  1:536636/1‑140 (MQ=255)

                                                                                  gACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAgg                                            <  2:621520/140‑1 (MQ=255)

                                                                                  gACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAgg                                            <  2:520381/140‑1 (MQ=255)

                                                                                   aCGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAggg                                           >  2:776795/1‑140 (MQ=255)

                                                                                     gCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGGTGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGAt                                         >  1:828532/1‑140 (MQ=255)

                                                                                     gCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGAt                                         >  2:342246/1‑140 (MQ=255)

                                                                                     gCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGAt                                         >  2:422461/1‑140 (MQ=255)

                                                                                     gCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGAt                                         >  1:82948/1‑140 (MQ=255)

                                                                                     gCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGAt                                         >  2:109816/1‑140 (MQ=255)

                                                                                            aaTCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAAt                                  <  2:602838/140‑1 (MQ=255)

                                                                                              acAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCt                                <  2:356341/139‑1 (MQ=255)

                                                                                               cAAGAATGGCACGAGACTCCGCGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTg                               >  2:424647/1‑140 (MQ=255)

                                                                                                 aGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGAt                             <  1:81034/140‑1 (MQ=255)

                                                                                                     tGGCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATcgcc                         >  2:313386/1‑140 (MQ=255)

                                                                                                      ggCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATcgccg                        <  2:183877/140‑1 (MQ=255)

                                                                                                      ggCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATcgccg                        <  1:776795/140‑1 (MQ=255)

                                                                                                      ggCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATcgccg                        <  2:848045/140‑1 (MQ=255)

                                                                                                       gCACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATcgccgc                       >  1:267357/1‑140 (MQ=255)

                                                                                                        cACGAGACTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATCGCCGCa                      <  1:422461/140‑1 (MQ=255)

                                                                                                           gagaCTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATCGCCGCACTg                   <  2:169403/140‑1 (MQ=255)

                                                                                                           gagaCTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATCGCCGCACTg                   <  2:318828/140‑1 (MQ=255)

                                                                                                           gagaCTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATCGCCGCACTg                   <  2:792817/140‑1 (MQ=255)

                                                                                                            agaCTCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATCGCCGCACTgg                  >  2:750510/1‑140 (MQ=255)

                                                                                                                tCCGTGCTGCTACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATCGCCGCACTggagga              >  1:486985/1‑140 (MQ=255)

                                                                                                                      ctgctACTGGAAAAGCTATGATGTGGAGTAAAAATCCGGTAAAAACAGAGAAGCTGTGGTAAGCATGAAATAAATAACGGTTTTATCAAAGAAACAATACCAGAGAATAAAAATCTGATCGCCGCACTGGAGGATAacgg        <  2:808970/140‑2 (MQ=255)

                                                                                                                       tgctACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATCGCCGCACTGGAGGATAacgac       <  1:750510/140‑1 (MQ=255)

                                                                                                                          tACTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATCGCCGCACTGGAGGATAACGACGAt    <  1:346548/140‑1 (MQ=255)

                                                                                                                            cTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATCGCCGCACTGGAGGATAACGACGATcc  <  2:486985/140‑1 (MQ=255)

                                                                                                                            cTGGAAAAACTAGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATCGCCGCACTGGAGGATAACGACGATcc  >  1:530256/1‑140 (MQ=255)

GGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTCGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATCGCCGCACTGGAGGATAACGACGATCC  >  NC_000913/321559‑321822

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A