Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A4 F48 I1 R1	79	90.7	3162666	99.0%	3131039	139.8

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	570,815	IS2 (+) +5 bp	intergenic (+387/‑74)	ybcK → / → ybcL	DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 382590	NA (NA)	106 (1.150)	60/274	0.2	100%	noncoding (1331/1331 nt)	IS2	repeat region
*	?	NC_000913	570815 =	0 (0.000)	106 (1.150)	60/274	0.2	100%	intergenic (+387/‑78)	ybcK/ybcL	DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL
*	?	NC_000913	= 570819	0 (0.000)	148 (1.580)	80/278	0.0	100%	intergenic (+391/‑74)	ybcK/ybcL	DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL
*	?	NC_000913	= 1469240	NA (NA)	148 (1.580)	80/278	0.0	100%	noncoding (1/1331 nt)	IS2	repeat region

Only 100 of 114 total aligned reads displayed.

CCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/382450‑382590

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caTGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACTGTATTGGCATTCATAACATTTTCTGCGCAGGCTGC  >  NC_000913/570815‑570951

CCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCC                                                                                                                                            >  1:413138/1‑140

CCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCC                                                                                                                                            >  2:395593/1‑140

CCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCACCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCC                                                                                                                                            >  2:1231251/1‑140

 CTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCA                                                                                                                                           <  1:1544064/140‑1

 CTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCA                                                                                                                                           <  1:120701/140‑1

 CTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGAGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCA                                                                                                                                           <  1:298555/140‑1

 CTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCACATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCA                                                                                                                                           <  2:1483683/140‑1

   TGCAGAGTCGGCAGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCGCGTGAATATCTGCGGCAGCGGGCTTGTAACGGGTTAAGTGAGAACAGATGTCTGGAAATATAGGGGCAATTCCgcc                                                                                                                                         <  2:890922/140‑4

   TGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATG                                                                                                                                         <  2:1154488/140‑1

   TGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGCGCGCTGGGCTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATG                                                                                                                                         >  2:737119/1‑140

   TGCAGAGGCGTTCGAGCATTATAACGAATGGCAACCGCATAGTGCGCTGGGTTATCGCACGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATG                                                                                                                                         >  2:1434913/1‑140

    GCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGA                                                                                                                                        >  2:182088/1‑140

       GAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACA                                                                                                                                     <  1:678534/140‑1

          GCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTG                                                                                                                                  >  1:1209184/1‑140

          GCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTG                                                                                                                                  >  1:678629/1‑140

          GCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTG                                                                                                                                  <  1:1118056/140‑1

          GCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTG                                                                                                                                  <  1:511148/140‑1

            GTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCG                                                                                                                                <  1:978106/140‑1

            GTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCG                                                                                                                                <  2:1484971/140‑1

            GTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCG                                                                                                                                <  1:333228/140‑1

            GTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCG                                                                                                                                <  1:1434913/140‑1

            GTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCG                                                                                                                                <  2:1209184/140‑1

                 AGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTT                                                                                                                           <  1:813070/140‑1

                    ATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATG                                                                                                                        <  2:363313/140‑1

                    ATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATG                                                                                                                        <  1:978516/140‑1

                      TATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCA                                                                                                                      <  2:252920/140‑1

                         AACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAA                                                                                                                   <  2:1140301/140‑1

                         AACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAA                                                                                                                   <  1:917830/140‑1

                         AACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAA                                                                                                                   <  1:1333987/140‑1

                         AACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAA                                                                                                                   <  2:559816/140‑1

                             AATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAG                                                                                                               >  2:1154705/1‑140

                                GGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATA                                                                                                            >  1:1311934/1‑140

                                GGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATA                                                                                                            >  1:930115/1‑140

                                GGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATA                                                                                                            >  1:1184685/1‑140

                                GGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATA                                                                                                            >  2:862281/1‑140

                                GGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATA                                                                                                            >  2:884508/1‑140

                                 GCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAA                                                                                                           <  1:130397/140‑1

                                    TCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGG                                                                                                        >  2:1236721/1‑140

                                    TCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGG                                                                                                        >  2:707486/1‑140

                                     CCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGA                                                                                                       >  2:663231/1‑140

                                             TGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAA                                                                                               <  1:65566/140‑1

                                             TGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAA                                                                                               <  1:1567008/140‑1

                                                 CTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGTGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAA                                                                                           >  1:340395/1‑140

                                                 CTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAA                                                                                           >  1:459232/1‑140

                                                 CTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAA                                                                                           <  2:930115/140‑1

                                                       TATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACG                                                                                     >  2:942326/1‑140

                                                        ATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGA                                                                                    <  1:1012930/140‑1

                                                        ATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGA                                                                                    <  2:1311934/140‑1

                                                        ATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGA                                                                                    <  1:1384068/140‑1

                                                        ATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGA                                                                                    <  2:1439478/140‑1

                                                        ATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGA                                                                                    >  2:820508/1‑140

                                                        ATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGA                                                                                    <  1:1236721/140‑1

                                                         TCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGAT                                                                                   >  2:793484/1‑140

                                                            CTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGG                                                                                <  1:1154705/140‑1

                                                              CGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTC                                                                              >  2:1099525/1‑140

                                                               GCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCA                                                                             <  1:1218007/140‑1

                                                                           TCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGT                                                                 >  2:1221531/1‑140

                                                                               CGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTT                                                             >  2:11012/1‑140

                                                                                     CGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAA                                                       >  1:1345132/1‑140

                                                                                             TAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTAT                                               <  1:862281/140‑1

                                                                                                TGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGT                                            <  1:707486/140‑1

                                                                                                TGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGT                                            <  1:603742/140‑1

                                                                                                  GGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTT                                          >  1:1001700/1‑140

                                                                                                  GGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTT                                          >  2:89902/1‑140

                                                                                                  GGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTT                                          >  2:1094944/1‑140

                                                                                                  GGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTT                                          >  1:1560670/1‑140

                                                                                                    TTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCA                                        >  1:1575455/1‑140

                                                                                                     TAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAA                                       <  1:663231/140‑1

                                                                                                      AAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAAC                                      >  2:152354/1‑140

                                                                                                       AGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACT                                     >  1:1507739/1‑140

                                                                                                       AGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACT                                     >  1:1497079/1‑140

                                                                                                       AGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTC                                         >  2:1355146/1‑136

                                                                                                            TAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACTGTATT                                >  1:1032521/1‑140

                                                                                                            TAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACTGTATT                                >  1:1278128/1‑140

                                                                                                            TAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAA                                       <  1:1449144/133‑1

                                                                                                            TAACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAA                                       >  2:1449144/1‑133

                                                                                                             AACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACTGTATTG                               <  1:182088/140‑1

                                                                                                             AACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACTGTATTG                               <  1:1221531/140‑1

                                                                                                              ACAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACTGTATTGG                              >  2:450141/1‑140

                                                                                                               aAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGTATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACTGTATTGGC                             <  2:730083/139‑1

                                                                                                               CAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACTGTATTGGC                             <  1:1094944/140‑1

                                                                                                               CAGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACTGTATTGGC                             <  1:884508/140‑1

                                                                                                                AGATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACTGTATTGGCA                            <  2:219363/140‑1

                                                                                                                  ATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAACCACTTATCGTTTCAACTGTATTGGCATT                          >  1:1512524/1‑140

                                                                                                                  ATGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACTGTATTGGCATT                          >  2:1075814/1‑140

                                                                                                                   aGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACTGTATTGGCATTC                         <  2:1345132/139‑1

                                                                                                                   TGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAATGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACTGTATTGGCATTC                         >  1:1280860/1‑140

                                                                                                                   TGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACTGTATTGGCATTC                         >  1:648632/1‑140

                                                                                                                   TGTCTGGAAATATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACTGTATTGGCATTC                         <  1:11012/140‑1

                                                                                                                              ATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACTGTATTGGCATTCATAACATTTTt              >  1:1562086/1‑139

                                                                                                                              ATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACTGTATTGGCATTCATAACATTTTC              >  1:1065699/1‑140

                                                                                                                              ATAGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACTGTATTGGCATTCATAACATTTTC              <  1:488261/140‑1

                                                                                                                                AGGGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACTGTATTGGCATTCATAACATTTTCTG            >  1:484900/1‑140

                                                                                                                                  GGGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACTGTATTGGCATTCATAACATTTTCTGCG          <  1:151315/140‑1

                                                                                                                                   GGCAAATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACTGTATTGGCATTCATAACATTTTCTGCGC         >  1:1096051/1‑140

                                                                                                                                       AATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACTGTATTGGCATTCATAACATTTTCTGCGCAGGC     >  2:738821/1‑140

                                                                                                                                       AATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACTGTATTGGCATTCATAACATTTTCTGCGCAGGC     <  2:1497079/140‑1

                                                                                                                                       AATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACTGTATTGGCATTCATAACATTTTCTGCGCAGGC     <  2:283750/140‑1

                                                                                                                                        ATCCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACTGTATTGGCATTCATAACATTTTCTGCGCAGGCT    >  1:905304/1‑140

                                                                                                                                          CCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACTGTATTGGCATTCATAACATTTTCTGCGCAGGCTGC  <  1:1189406/140‑1

CCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/382450‑382590

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caTGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGATAGGTCATAACAAAGAGGTTTTTATGAAAACACTTATCGTTTCAACTGTATTGGCATTCATAACATTTTCTGCGCAGGCTGC  >  NC_000913/570815‑570951

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.

GATK/CNVnator alignment

N/A