Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A3 F48 I1 R1	70	151.6	5072932	98.7%	5006983	139.8

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	178,854	C→A	A100A (GCG→GCT)	mtn ←	5'‑methylthioadenosine/S‑adenosylhomocysteine nucleosidase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	178,854	0	C	A	100.0%	469.9 / NA	131	A100A (GCG→GCT)	mtn	5'‑methylthioadenosine/S‑adenosylhomocysteine nucleosidase
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (62/69); total (62/69)

Only 100 of 133 total aligned reads displayed.

CAATCAGGCCACGTACAGCGTTAAGATTCAGTTCGGCAATGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCCGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCTGGCTTGCAGTGTTCCAACAGCAAAGTGGCACCCAGCG  >  NC_000913/178718‑178987

cAATCAGGCCACGTACAGCGTTAAGATTCAGTTCGGCAATGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCagcg                                                                                                                                    <  1:844333/140‑1 (MQ=255)

     aGGCCACGTACAGCGTTAAGATTCAGTTCGGCAATGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTACAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTAGTg                                                                                                                               <  2:2410971/140‑1 (MQ=255)

       gCCACGTACAGCGTTAAGATTCAGTTCGGCAATGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGAt                                                                                                                             >  2:1863679/1‑140 (MQ=255)

         cACGTACAGCGTTAAGATTCAGTTCGGCAATGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATaa                                                                                                                           <  1:1064983/140‑1 (MQ=255)

         cACGTACAGCGTTAAGATTCAGTTCGGCAATGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATaa                                                                                                                           >  2:1415843/1‑140 (MQ=255)

         cACGTACAGCGTTAAGATTCAGTTCGGCAATGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATaa                                                                                                                           >  2:2203933/1‑140 (MQ=255)

         cACGTACAGCGTTAAGATTCAGTTCGGCAATGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATaa                                                                                                                           >  2:719734/1‑140 (MQ=255)

           cGTACAGCGTTAAGATTCAGTTCGGCAATGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACg                                                                                                                         >  2:461038/1‑140 (MQ=255)

           cGTACAGCGTTAAGATTCAGTTCGGCAATGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACg                                                                                                                         >  1:979173/1‑140 (MQ=255)

            gTACAGCGTTAAGATTCAGTTCGGCAATGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGt                                                                                                                        >  2:494898/1‑140 (MQ=255)

             tACAGCGTTAAGATTCAGTTCGGCAATGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTg                                                                                                                       >  1:1857371/1‑140 (MQ=255)

               cAGCGTTAAGATTCAGTTCGGCAATGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCt                                                                                                                     <  2:2488410/140‑1 (MQ=255)

               cAGCGTTAAGATTCAGTTCGGCAATGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCt                                                                                                                     <  1:1704419/140‑1 (MQ=255)

                 gCGTTAAGATTCAGTTCGGCAATGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTc                                                                                                                   >  1:1199852/1‑140 (MQ=255)

                  cGTTAAGATTCAGTTCGGCAATGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCg                                                                                                                  >  1:725741/1‑140 (MQ=255)

                    ttAAGATTCAGTTCGGCAATGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTc                                                                                                                <  1:1479493/140‑1 (MQ=255)

                    ttAAGATTCAGTTCGGCAATGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTc                                                                                                                <  2:604051/140‑1 (MQ=255)

                      aaGATTCAGTTCGGCAATGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCg                                                                                                              >  1:186334/1‑140 (MQ=255)

                       aGATTCAGTTCGGCAATGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCga                                                                                                             <  2:1334722/140‑1 (MQ=255)

                       aGATTCAGTTCGGCAATGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCga                                                                                                             <  1:218894/140‑1 (MQ=255)

                       aGATTCAGTTCGGCAATGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTCAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCga                                                                                                             >  1:1659329/1‑140 (MQ=255)

                       aGATTCAGATCGGCAATGCGGGCGTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCGTAACCAAATGCCGTGACATTAGCGTCGTGATAACGTGCTTCGTCCga                                                                                                             <  2:1883418/140‑1 (MQ=255)

                             aGTTCGGCAATGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAAc                                                                                                       >  1:994235/1‑140 (MQ=255)

                              gTTCGGCAATGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACg                                                                                                      >  1:1966046/1‑140 (MQ=255)

                               ttCGGCAATGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGa                                                                                                     >  1:264468/1‑140 (MQ=255)

                                      aTGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGcc                                                                                              <  1:981469/140‑1 (MQ=255)

                                      aTGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGcc                                                                                              <  1:719734/140‑1 (MQ=255)

                                      aTGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGcc                                                                                              <  2:35512/140‑1 (MQ=255)

                                      aTGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGcc                                                                                              <  2:1075974/140‑1 (MQ=255)

                                       tGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGccc                                                                                             <  2:2166749/140‑1 (MQ=255)

                                       tGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGccc                                                                                             <  2:160313/140‑1 (MQ=255)

                                            gCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACttt                                                                                        >  1:246344/1‑140 (MQ=255)

                                             ccTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTc                                                                                       <  1:1475350/140‑1 (MQ=255)

                                              cTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCa                                                                                      >  1:345711/1‑140 (MQ=255)

                                                 aGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACg                                                                                   >  1:1077290/1‑140 (MQ=255)

                                                 aGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACg                                                                                   >  1:893184/1‑140 (MQ=255)

                                                 aGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACg                                                                                   >  1:2491100/1‑140 (MQ=255)

                                                   cGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGtt                                                                                 <  2:1538643/140‑1 (MQ=255)

                                                   cGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGtt                                                                                 <  2:2514742/140‑1 (MQ=255)

                                                   cGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGtt                                                                                 <  2:700325/140‑1 (MQ=255)

                                                      cAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGt                                                                              >  1:1908343/1‑140 (MQ=255)

                                                      cAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGt                                                                              >  1:2501460/1‑140 (MQ=255)

                                                      cAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGt                                                                              >  2:659323/1‑140 (MQ=255)

                                                       aGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTg                                                                             >  1:227696/1‑140 (MQ=255)

                                                           aTCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAg                                                                         >  2:828814/1‑140 (MQ=255)

                                                               gTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCCAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCa                                                                     <  2:1908343/140‑1 (MQ=255)

                                                               gTTTATCGTCAGCTTTAAAGCCTACCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCa                                                                     <  1:1946952/140‑1 (MQ=255)

                                                                tttATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCAc                                                                    >  2:2013998/1‑140 (MQ=255)

                                                                tttATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCAc                                                                    <  2:1199852/140‑1 (MQ=255)

                                                                   aTCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCgg                                                                 <  2:34618/140‑1 (MQ=255)

                                                                   aTCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCgg                                                                 <  1:1195542/140‑1 (MQ=255)

                                                                     cGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCa                                                               >  1:2447202/1‑140 (MQ=255)

                                                                         aGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAAc                                                           >  2:94848/1‑140 (MQ=255)

                                                                         aGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAAc                                                           <  2:2208167/140‑1 (MQ=255)

                                                                         aGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAAc                                                           <  2:120832/140‑1 (MQ=255)

                                                                         aGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAAc                                                           <  2:725741/140‑1 (MQ=255)

                                                                          gCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAAcc                                                          <  1:388285/140‑1 (MQ=255)

                                                                          gCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAAcc                                                          >  2:810439/1‑140 (MQ=255)

                                                                          gCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAAcc                                                          <  2:1125636/140‑1 (MQ=255)

                                                                          acTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAAcc                                                          <  2:1659531/139‑1 (MQ=255)

                                                                           cTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCg                                                         <  2:2501460/140‑1 (MQ=255)

                                                                            tttAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGCTATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCgg                                                        <  2:2447202/140‑1 (MQ=255)

                                                                            tttAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCgg                                                        <  2:1966046/140‑1 (MQ=255)

                                                                              tAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGgtg                                                      >  1:677310/1‑140 (MQ=255)

                                                                                     tGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCTCACTTTCAACGTTGGTGCCAGGCCACCgg                                                                 <  1:2243357/122‑1 (MQ=255)

                                                                                     tGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTtaataa                                               >  1:2089007/1‑140 (MQ=255)

                                                                                     tGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTtaataa                                               <  1:1708280/140‑1 (MQ=255)

                                                                                      gCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTaataat                                              <  2:966413/140‑1 (MQ=255)

                                                                                           aCAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACAt                                         <  1:461038/140‑1 (MQ=255)

                                                                                           aCAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACAt                                         <  1:128033/140‑1 (MQ=255)

                                                                                           aCAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACAt                                         <  2:1659329/140‑1 (MQ=255)

                                                                                            cAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATc                                        >  1:757830/1‑140 (MQ=255)

                                                                                             aGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCt                                       <  1:1776528/140‑1 (MQ=255)

                                                                                                cTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCTGGc                                    <  2:890/140‑1 (MQ=255)

                                                                                                  ggTAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCTGGCtt                                  <  1:828814/140‑1 (MQ=255)

                                                                                                    tAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCTGGCTTGc                                <  1:659323/140‑1 (MQ=255)

                                                                                                    tAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCTGGCTTGc                                >  1:340049/1‑140 (MQ=255)

                                                                                                    tAACTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCTGGCTTGc                                <  2:264468/140‑1 (MQ=255)

                                                                                                       cTGACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCAACCGGCAGAACCGGTGTTAATAATCCCATCTGGCTTGCAgt                             <  1:2478958/140‑1 (MQ=255)

                                                                                                         gACCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCTGGCTTGCAgtgt                           >  2:1534468/1‑140 (MQ=255)

                                                                                                          aCCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCTGGCTTGCAGTGtt                          >  2:1737214/1‑140 (MQ=255)

                                                                                                          aCCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCTGGCTTGCAGTGtt                          >  1:1574955/1‑140 (MQ=255)

                                                                                                          aCCGTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCTGGCTTGCAGTGtt                          >  1:2328406/1‑140 (MQ=255)

                                                                                                             gTATTCATAACCAAATGGCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATGTCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCTGGCTTGCAGTGTTCCa                       <  2:695441/140‑1 (MQ=255)

                                                                                                             gTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCATTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCTGGCTTGCAGTGTTCCa                       >  1:137278/1‑140 (MQ=255)

                                                                                                             gTATTCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCTGGCTTGCAGTGTTCCa                       >  2:1305288/1‑140 (MQ=255)

                                                                                                                 tCATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCTGGCTTGCAGTGTTCCAACAg                   <  2:1857371/140‑1 (MQ=255)

                                                                                                                  cATAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCTGGCTTGCAGTGTTCCAACAGc                  <  2:227696/140‑1 (MQ=255)

                                                                                                                   aTAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCTGGCTTGCAGTGTTCCAACAGCa                 <  2:1266637/140‑1 (MQ=255)

                                                                                                                   aTAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCTGGCTTGCAGTGTTCCAACAGCa                 <  2:757830/140‑1 (MQ=255)

                                                                                                                   aTAACCAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCTGGCTTGCAGTGTTCCAACAGCa                 <  2:979173/140‑1 (MQ=255)

                                                                                                                        cAAATGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCTGGCTTGCAGTGTTCCAACAGCAAAGTg            >  1:1712312/1‑140 (MQ=255)

                                                                                                                         aaaTGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCTGGCTTGCAGTGTTCCAACAGCAAAGTgg           <  1:1737214/140‑1 (MQ=255)

                                                                                                                          aaTGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCTGGCTTGCAGTGTTCCAACAGCAAAGTGGc          >  2:1112961/1‑140 (MQ=255)

                                                                                                                          aaTGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCTGGCTTGCAGTGTTCCAACAGCAAAGTGGc          >  1:2158654/1‑140 (MQ=255)

                                                                                                                           aTGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCTGGCTTGCAGTGTTCCAACAGCAAAGTGGcc         >  1:539140/1‑139 (MQ=255)

                                                                                                                           aTGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCTGGCTTGCAGTGTTCCAACAGCAAAGTGGCa         <  1:1305288/140‑1 (MQ=255)

                                                                                                                           aTGCCGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCTGGCTTGCAGTGTTCCAACAGCAAAGTGGCa         <  1:637516/140‑1 (MQ=255)

                                                                                                                               cGTGACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCTGGCTTGCAGTGTTCCAACAGCAAAGTGGCACCCa     >  1:1670557/1‑140 (MQ=255)

                                                                                                                                  gACATCAGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCTGGCTTGCAGTGTTCCAACAGCAAAGTGGCACCCAgcg  <  1:494898/140‑1 (MQ=255)

CAATCAGGCCACGTACAGCGTTAAGATTCAGTTCGGCAATGCAGGCCTCAGCGGCAGCGATCAGTTTATCGTCAGCTTTAAAGCCTGCCGGACAGCCTGGTAACTGACCGTATTCATAACCAAATGCCGTGACATCCGCGTCGTGATAACGTGCTTCGTCCGAGACAACGATATCGCCCACTTTCAACGTTGGTGCCAGGCCACCGGCAGAACCGGTGTTAATAATCACATCTGGCTTGCAGTGTTCCAACAGCAAAGTGGCACCCAGCG  >  NC_000913/178718‑178987

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A