Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A0 F0 I1 R1	115	276.2	7960526	99.2%	7896841	150.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	3,725,082	A→C	A29A (GCT→GCG)	U712_19205 ←	Uncharacterized protein ywcI

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	3,725,082	0	A	C	100.0%	1467.3 / NA	377	A29A (GCT→GCG)	U712_19205	Uncharacterized protein ywcI
Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (186/191); total (186/191)

Only 100 of 379 total aligned reads displayed.

TTGCAAACATCTTCTTTTATAAAGCGCGGCGGCTTTCGCTTTTTGTTTTTCTTCCTCATTCACAGCCATCCGCCACTCATAAAACGAAACAAGTCCCGCGGCCTGCACCGCCGCTTTTCTTTGGTATGTACGCTGAGCCGAATAGACAGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCA‑G‑CC‑TTTTAGCAGCCCGTTTTCTCAG  >  CP006881/3724935‑3725227

    aaaCATCTTCTTTTATAAAGCGCGGCGGTTTTTGCATTCTGCTTTTCTTCCTCGTTCACGGCCATCCGCCTTTCATAAATCGGAACGAGGCCTGCCGACTGCGCGGCCGCCTTTCTTTGGGATGGTCGCTGGGCCGAATAGACCGCggga                                                                                                                                                >  2:1540262/1‑148 (MQ=255)

     aaCATCTTCTTTTATAAAGCGCGGCGGCTTTCGCTTTCTGCTTTTCTTCCTCATTCACAGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAg                                                                                                                                               <  1:535204/150‑1 (MQ=255)

       cATCTTCTTTTATAAAGCGCGGCGGCTTTCGCTTTCTGCTTTTCTTCCTCATTCACAGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCGGcc                                                                                                                                             >  1:3288883/1‑150 (MQ=255)

       cATCTTCTTTTATAAAGCGCGGCGGCTTTCGCTTTCTGCTTTTCTTCCTCATTCACAGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGGATGTACGCTGAGCCGAATAGACCGCGGCGGcc                                                                                                                                             >  2:2649903/1‑150 (MQ=255)

        aTCTTCTTTTATAAAGCGCGGCGGCTTTCGCTTTCTGCTTTCCTTCCTCATTCACAGCCACCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCg                                                                                                                                            <  1:252469/150‑1 (MQ=255)

         tcttctTTTATAAAGCGCGGCGGCTTTCGCTTTCTGCTTTTCTTCCTCATTCACAGCCATCCGCCATTCATAAAACGAAACGAGGCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGTGCCGGATAGTCCGCGGCAGgcgc                                                                                                                                           >  2:296131/1‑150 (MQ=255)

          cttcttTTATAAAGCGCGGCGGCTTTCGCTTTCTGCTTTTCTTCCTCATTCACAGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCa                                                                                                                                          >  2:1994138/1‑150 (MQ=255)

            tcctttATAAAGAGCGGCGGCTTTCGCTTTCTGCTTTTCTTCCACATTCACAGCCATCCGCCATTCATAAATCGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCCTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGt                                                                                                                                        <  1:361877/147‑1 (MQ=255)

                 tataAAGCGCGGCGGCTTTCGCTTTCTGCTTTTCTTCCTCATTCACAGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGGATGGACGCTGGGCCCAAAAGGCCCCGGCCGGCGCCGgttttt                                                                                                                                   >  1:2488906/1‑149 (MQ=255)

                    aaaGCGCGGCGGCTTTCGCTTTCTGCTTTTCTTCCTCATTCACAGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGt                                                                                                                                <  1:979065/150‑1 (MQ=255)

                      aGCGCGGCGGCTTTCGCTTTCTGCTTTTCCTCCACATTCACAGCCATCCGCCATCCATAGAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGGGGCAGCCGCAGTTTTTCTGTcc                                                                                                                              <  2:3746083/150‑1 (MQ=255)

                       gcgcGGCGGCTTTCGCTTTCTGCTTTTCTTCCTCATTCACAGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCg                                                                                                                             <  1:2902759/150‑1 (MQ=255)

                           ggcggcTTTCGCTTTCTGCTTTTCTTCCTCATTCACAGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGt                                                                                                                         <  1:2310678/150‑1 (MQ=255)

                              ggcTTTCGCTTTCTGCTTTTCTTCCTCATTCACAGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGACGCAGTTTTTCTGTCCGGCGTCAc                                                                                                                      >  2:245200/1‑150 (MQ=255)

                              ggcTTTCGCTTTCTGCTTTTCTTCCTCATTCACAGCCATCCCCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCCCCTTTCTTTGGTATGTACGCTGGGCCGAATAGAGCCCCGCAGCCGCAGCTTTTCTGTTCGGCCTCAc                                                                                                                      >  1:48612/1‑150 (MQ=255)

                               gctttcgctttcTGCTTTTCTTCCTCATTCACAGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCAcc                                                                                                                     >  2:1933016/1‑150 (MQ=255)

                                cTTTCGCTTTCTGCTTTTCTTCCTCATTCACAGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGGGCCGAATAGACCGCGGCAGCCGGAGTTTTTCTGTCCGGCGGCAccc                                                                                                                    >  1:89815/1‑150 (MQ=255)

                                 tttCGCTTTCTGCTTTTCTTCCTCATTCACAGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGGGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCCGCGTCAcccc                                                                                                                   >  1:1610445/1‑149 (MQ=255)

                                 tttCGCTTTCTGCTTTTCTTCCTCATTCACAGCCATCCGCAATTCATAAAACAAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCa                                                                                                                   <  1:3551602/150‑1 (MQ=255)

                                   tggCTTTCTGCTTTTCTTCCTCATCCACAGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGt                                                                                                                 <  1:3889794/148‑1 (MQ=255)

                                   tCGCTTTCTGCTTTTCTTCCTCATTCACAGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGt                                                                                                                 >  2:678462/1‑150 (MQ=255)

                                     gCTTTCTGCTTTTCTTCCTCATTCACAGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCCGAGCCGAAAAGACCGCGGCAGGCGCAGGTTTTCTGTCCGGCGGCACCCCGTtc                                                                                                               >  1:724836/1‑150 (MQ=255)

                                       tttctGCTTTTCTCCCTCATTCACAGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCGGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTtcat                                                                                                             <  1:1812131/150‑1 (MQ=255)

                                        ttctgcttttCTTCCTCATTCACAGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTtcatc                                                                                                            >  1:2454638/7‑150 (MQ=255)

                                        ttctgcttttCTTCCTCATTCACAGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTATTTCTGTCCGGCGCCCCCCCGTtcatc                                                                                                            >  1:2128183/7‑150 (MQ=255)

                                             cttttCTTCCTCATTCACAGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCaaaaa                                                                                                       <  1:2582622/149‑1 (MQ=255)

                                              tttcCTCCCTCTTTCACAGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGAGCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAATAg                                                                                                      <  2:3481784/150‑1 (MQ=255)

                                               tttCTTCCTCATTCACAGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGGCACCCAGTTCATCCAAAAGa                                                                                                     >  2:764813/1‑150 (MQ=255)

                                                ttcttcCTCATTCACAGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGGTCATCAAAAAGAc                                                                                                    >  2:2383536/1‑150 (MQ=255)

                                                 tcttcCTCATTCACAGCCATCCGCCATTCATAAAACGAGACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGAcc                                                                                                   <  1:2403065/150‑1 (MQ=255)

                                                 tcttcCTCATTCACAGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGAcc                                                                                                   <  2:609981/150‑1 (MQ=255)

                                                 tcttcCTCATTCACAGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGAcc                                                                                                   >  1:1654899/1‑150 (MQ=255)

                                                     ccccATTCACAGCCATCCACCATCCATAAAACGAAACGAGTCCTGCGGCCTGCACACCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATcc                                                                                               <  2:2788389/147‑1 (MQ=255)

                                                       tCATTCACAGCCATCCGCCATTCATAAAACGACACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCcac                                                                                             <  1:124657/150‑1 (MQ=255)

                                                       tCATCCACAGCCATCCGCCATTCATAAACCGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCcac                                                                                             <  2:2576473/150‑1 (MQ=255)

                                                        cATTCACAGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGTGCCGAATAGACCGCGGCAGCCGCAGTTTTCCTGTCCGGCGTCACCCAGGTCATCAAAAAGACCATCcaca                                                                                            >  2:1423086/1‑150 (MQ=255)

                                                         aTTCACAGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCacac                                                                                           <  1:3383517/150‑1 (MQ=255)

                                                          ttCACAGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACAcc                                                                                          <  1:456811/150‑1 (MQ=255)

                                                          ttCACAGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACAcc                                                                                          <  1:1884255/150‑1 (MQ=255)

                                                           tCACAGCCACCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACAccc                                                                                         <  1:424364/150‑1 (MQ=255)

                                                            cacaGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACAcccc                                                                                        >  1:192875/1‑149 (MQ=255)

                                                            cacaGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCg                                                                                        <  1:153727/150‑1 (MQ=255)

                                                              caGCCATCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTa                                                                                      <  1:647662/150‑1 (MQ=255)

                                                                   aTCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGGCGCAGTTTTTCTGTCCGGCGGCACCCAGTTCATCAAAAAGACCATCCACACCCCTAAAGAt                                                                                 >  2:3632485/1‑150 (MQ=255)

                                                                   aTCCGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGAt                                                                                 <  1:753544/150‑1 (MQ=255)

                                                                    tCCGCCATTCATAAAACGAAACGAGCCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATa                                                                                <  2:3467486/150‑1 (MQ=255)

                                                                    cccGCCATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATa                                                                                <  1:2277534/149‑1 (MQ=255)

                                                                        ccATTCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCAGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAg                                                                            <  2:3084585/150‑1 (MQ=255)

                                                                          attCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCa                                                                          <  1:2825828/148‑1 (MQ=255)

                                                                           ttCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCaa                                                                         >  2:287795/2‑150 (MQ=255)

                                                                           ttCATAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTGTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCCCACCCGGAAAGGTACCAGCaa                                                                         >  2:3388157/2‑150 (MQ=255)

                                                                             cATAAACCGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAAc                                                                       <  2:925124/150‑1 (MQ=255)

                                                                               tAAAACGAAACGAGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGt                                                                     <  1:1994138/150‑1 (MQ=255)

                                                                                      atacgaGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAg                                                              <  1:3174857/145‑1 (MQ=255)

                                                                                      aaaCGAGCCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCACAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAg                                                              <  1:1719671/150‑1 (MQ=255)

                                                                                        acgagccccGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCATCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCAGCCACACCCGTAAAGATACAAGCAAACGTTCCATAGaa                                                            <  1:132899/144‑1 (MQ=255)

                                                                                        acgaGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCCGTTCATCAAAAAGACCAACCACACCCGTAAAGAGACAAGCAAACGGTTCATAGaa                                                            >  1:280533/4‑150 (MQ=255)

                                                                                         cgaGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGaaa                                                           <  1:114237/148‑1 (MQ=255)

                                                                                         cgaGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAAACCAACCACACCCGGAAAAGTACAAGCAAAAGTTTCAAAGaaa                                                           >  1:3454865/3‑150 (MQ=255)

                                                                                          gaGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGGGTCACCCAGTTCATCAAAAAGACCATCCACACCCCTAAAGATACAAGCAAACGGTTCATAGgaaa                                                          >  1:687936/2‑150 (MQ=255)

                                                                                          gaGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGGCCATCCACACCCGTAAAGATACAAGCAAACGGTTCATAGaaaa                                                          >  2:2249432/2‑150 (MQ=255)

                                                                                          gaGTCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGaaaa                                                          <  1:1840396/149‑1 (MQ=255)

                                                                                             tCCTGCGGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGCCCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTCCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCACACGTTTCATAGAAAAACa                                                       <  1:2646876/150‑1 (MQ=255)

                                                                                              cctgcgGCCTGGACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGACACCCAGTTCATCAGAAAGACCACCCACATCCGTAAAGATACAAGCAAACGTTTCGTAGATAAAGAt                                                      <  2:407429/147‑1 (MQ=255)

                                                                                              cctgcgGCCTGCACAGCCGCCTTTCTTTGGTATGTACCCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCCAAAAGACCCTCCACACCCGTGAAGATACAAGCCAACGTTTCATAGGAAAAcct                                                      >  1:3692988/4‑148 (MQ=255)

                                                                                               ctgcgGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCCCACCCGCAAAGGTCCAAGCAAACGTTTCATAGaaaaaactc                                                     >  2:2205635/3‑146 (MQ=255)

                                                                                                tgcgGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATcc                                                    <  1:2235976/149‑1 (MQ=255)

                                                                                                tgcgGCCTGCACAGCCGCCTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGGTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATcc                                                    >  1:2723371/2‑150 (MQ=255)

                                                                                                    gCCTGCACAGCCGCCTGTCTTTGGTATGTACGCTGAGCGGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTcc                                                <  1:863831/150‑1 (MQ=255)

                                                                                                          acagccgccTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGcttct                                          >  1:3481720/4‑150 (MQ=255)

                                                                                                           ccgccgCCTTTCTTTGGTATGTACGCTGAGCCGAGTAGACCGCGGCAGCCGCAGTCTTTCTGACCGGCGTCACCCAGTTCAACAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGcttctt                                         <  2:505310/150‑1 (MQ=255)

                                                                                                           cagccgccTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGGTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGGTTCATAGAAAAACATCCCTCCCcttcct                                         >  1:2174580/3‑148 (MQ=255)

                                                                                                             gccgccTTTCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCtttt                                       <  2:252223/150‑1 (MQ=255)

                                                                                                                 cctttCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTggc                                   <  1:3917602/148‑1 (MQ=255)

                                                                                                                 cctttCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTggc                                   <  1:1771450/148‑1 (MQ=255)

                                                                                                                  ctttCTGTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCTGCTTCTTTTTggca                                  <  1:1052228/149‑1 (MQ=255)

                                                                                                                    ttCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCGGTTTTTCTGTCCGGCGTCCCCCCGTTCATCCAAAAGACCATCCCCACCCGCCAGGGTACAAGCAAACGTTTCATAGGAAAACATCCCCCCCCTTCTTTTTggcagg                                >  1:1956899/1‑150 (MQ=255)

                                                                                                                    ttCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGGTTTTCTGTCCGGCGGCACCCAGTTCATCAAAAAGACCATCCACAACCCTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCCTCCTTTTggctgg                                >  1:2063461/1‑150 (MQ=255)

                                                                                                                     tCTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTggcaggc                               >  2:3198195/1‑150 (MQ=255)

                                                                                                                      cTTTGGTATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGAAACAAGCAAACGTCTCATAGAAAAACATCCCTCCGACTCTTTTTggccggca                              >  1:1023578/1‑150 (MQ=255)

                                                                                                                            tATGTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTC‑TTTTGGCAGGCA‑G‑CC‑tttt                    <  2:1144663/150‑1 (MQ=255)

                                                                                                                              tGTACGCGGAGCCGGAAAGGCCGCGGCGGCCGCAGTTTCTCTGTCCGGCGCCACCCAGTCCATCAAAAAGACCAACCACACCCGTAAAGATACAAGCACACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCA‑G‑CC‑ttttt                   <  2:3826790/150‑2 (MQ=255)

                                                                                                                               gTACGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGGTCATCAAAAAGACCATCCACACCCGCAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCA‑G‑CC‑ttttta                  >  2:1636090/1‑148 (MQ=255)

                                                                                                                                 aCGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCA‑G‑CC‑tttttagc                >  1:1081373/1‑146 (MQ=255)

                                                                                                                                 aCGCTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCA‑G‑CC‑tttttagc                <  1:579112/150‑5 (MQ=255)

                                                                                                                                    cTGAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCA‑G‑CCTTTTTagcagc              <  2:1035173/150‑1 (MQ=255)

                                                                                                                                      gAGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGCAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCA‑G‑CCTTTTTAGCAGccc            >  1:3847702/1‑150 (MQ=255)

                                                                                                                                       aGCCGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACCCCCGTAAAGATACCAGCAAACGTTTCATAGAAAAACCTCCCTCCCCTTCTTTTTGGCTGGCA‑G‑CCTTTTTAGCAGCCCg           >  1:3120555/1‑150 (MQ=255)

                                                                                                                                        gcggAATAGACCGCGGCAGCCGCAGTTTTTCTGGCCGGCGCCACCCAGTTCACCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTCCTTTTTGGCAGGCA‑G‑CCTTTTTAGCAGCCCGt          <  1:2776971/147‑1 (MQ=255)

                                                                                                                                         ccGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGAAACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCA‑G‑CCTTTTTAGCAGCCCGtt         >  1:1406003/1‑150 (MQ=255)

                                                                                                                                         ccGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCATAAAGATACAAGCAAACGTTTCATAGAAACACATCCCTCCGCTTCTTTTCGGCAGGCA‑G‑CCTTTTTAGGAGCCCggt         >  2:580863/1‑148 (MQ=255)

                                                                                                                                         ccGAATAGACCGCGGCAGCCGCAGTATTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACAACCCTCCGCCTCTTTTTGGCGGGCAGG‑CT‑TTTTCGCAGCCCGta         >  2:2697820/1‑149 (MQ=255)

                                                                                                                                          cGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTTAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCA‑GCCC‑TTTTAGCAGCCCGttt        >  2:1779410/1‑150 (MQ=255)

                                                                                                                                          cGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAATCGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCA‑G‑CCTTTTTTGCAGCCCGgtt        >  1:1466977/1‑150 (MQ=255)

                                                                                                                                          cGAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACCTCCCTCCGCTTCCTTTTGGCAGGCA‑G‑CCTTTTTAGCAGCCCGgtt        >  1:3032176/1‑150 (MQ=255)

                                                                                                                                          cGAATAGACCGCGGCAGCCGCAGTTTTTCTGCCCGGCGCCACCCAGTCCATC‑AACAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCA‑G‑CCTTTTTAGCAGCCCGtttt       <  2:2061015/150‑1 (MQ=255)

                                                                                                                                           gAATAGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCCGAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCA‑G‑CCTTTTTAGCAGCCCGtttt       >  2:1677409/1‑150 (MQ=255)

                                                                                                                                               aGACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCA‑G‑CCTTTTTAGCAGCCCGTTTTCTCa   >  1:1553856/1‑150 (MQ=255)

                                                                                                                                                gACCGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCCTTTTGGCAGGCA‑G‑CCTTTTTAGCAGCCCGGTTTCTCAg  >  1:3790206/1‑150 (MQ=255)

                                                                                                                                                gACCGCGGCAGCCGCAGTCTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCA‑G‑CCTTTTTAGCAGCCCGTTTTCTCAg  <  2:1288560/150‑1 (MQ=255)

TTGCAAACATCTTCTTTTATAAAGCGCGGCGGCTTTCGCTTTTTGTTTTTCTTCCTCATTCACAGCCATCCGCCACTCATAAAACGAAACAAGTCCCGCGGCCTGCACCGCCGCTTTTCTTTGGTATGTACGCTGAGCCGAATAGACAGCGGCAGCCGCAGTTTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCA‑G‑CC‑TTTTAGCAGCCCGTTTTCTCAG  >  CP006881/3724935‑3725227

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A