Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A14 F56 I20 R2 1958 92.1 3575798 91.1% 3257551 126.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP006881 2,198,311 T→C K224K (AAA→AAG)  U712_11015 ← Chemotaxis protein methyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068812,198,3110TC100.0% 208.6 / NA 64K224K (AAA→AAG) U712_11015Chemotaxis protein methyltransferase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (32/32);  total (32/32)

AAACTACTATAACATATTTTTCAGCAAAAAGTCAGTCTATCTTTTTTGATAAAAGAATGTATCGGCTGGAGCCAGGCCAAATTTCTCCGGATTGAAGATTTGCTCGGTGCTGCCGACAAATAGGACTCCATTCTTTTTCAAGCTATGTGCCATTTTTAAATAAAGCTCTTCCTTGGCGCTTTCTGTAAAATAAATAAATACATTGCGGCACACAATTAAGTCAAAGTCTTGTTCATAACGATCAGCCAGTAGATTGTGCTTTTTGA  >  CP006881/2198176‑2198441
                                                                                                                                       |                                                                                                                                  
agactactATAACATATTTTTCAGCAAAAAGTCAGTCTATCTTTTTTGATAAAAGAATGTATCGGCTGGGACTAGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTcttctt                                                                                                                                  >  5:412621/3‑138 (MQ=255)
 gactactATAACATATTTTTCAGCAAAAAGTCAGTCTATCTTTTTTGATAAAAGAATGTATCGGCTGGGACTAGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCAttcttcttc                                                                                                                                 >  1:105339/2‑138 (MQ=255)
 gactactATAACATATTTTTCAGCAAAAAGTCAGTCTATCTTTTTTGATAAAAGAATGTATCGGCTGGGACTAGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCa                                                                                                                                <  5:364503/138‑1 (MQ=255)
        ataACATATTTTTCAGCAAAAAGTCAGTCTATCTTTTTTGATAAAAGAATGTATCGGCTGGGACTAGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTAtg                                                                                                                         >  3:118983/1‑139 (MQ=255)
            cATATTTTTCAGCAAAAAGTCAGTCTATCTTTTTTGATAAAAGAATGTATCGGCTGGGACTAGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGc                                                                                                                      >  8:43251/1‑138 (MQ=255)
            cATATTTTTCAGCAAAAAGTCAGTCTATCTTTTTTGATAAAAGAATGTATCGGCTGGGACTAGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGc                                                                                                                      >  5:380173/1‑138 (MQ=255)
            cATATTTTTCAGCAAAAAGTCAGTCTATCTTTTTTGATAAAAGAATGTATCGGCTGGGACTAGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGc                                                                                                                      >  1:81286/1‑138 (MQ=255)
             atatTTTTCAGCAAAAAGTCAGTCTATCTTTTTTGATAAAAGAATGTATCGGCTGGGACTAGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCa                                                                                                                    <  7:343875/139‑1 (MQ=255)
             atatTTTTCAGCAAAAAGTCAGTCTATCTTTTTTGATAAAAGAATGTATCGGCTGGGACTAGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCa                                                                                                                    <  7:243000/139‑1 (MQ=255)
             atatTTTTCAGCAAAAAGTCAGTCTATCTTTTTTGATAAAAGAATGTATCGGCTGGGACTAGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCa                                                                                                                    <  8:326692/139‑1 (MQ=255)
              tatTTTTCAGCAAAAAGTCAGTCTATCTTTTTTGATAAAAGAATGTATCGGCTGGGACTAGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCAt                                                                                                                   >  8:112268/1‑139 (MQ=255)
              tatTTTTCAGCAAAAAGTCAGTCTATCTTTTTTGATAAAAGAATGTATCGGCTGGGACTAGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCAt                                                                                                                   >  1:26750/1‑139 (MQ=255)
                 ttttCAGCAAAAAGTCAGTCTATCTTTTTTGATAAAAGAATGTATCGGCTGGGACTAGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCAtttt                                                                                                                >  1:347858/1‑139 (MQ=255)
                   ttCAGCAAAAAGTCAGTCTATCTTTTTTGATAAAAGAATGTATCGGCTGGGACTAGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCAttttt                                                                                                               <  6:380173/138‑1 (MQ=255)
                      aGCAAAAAGTCAGTCTATCTTTTTTGATAAAAGAATGTATCGGCTGGGACTAGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTtaaa                                                                                                            <  5:103692/138‑1 (MQ=255)
                      aGCAAAAAGTCAGTCTATCTTTTTTGATAAAAGAATGTATCGGCTGGGACTAGGCCAAATTTCTCGGGATTGAAGATTTGATCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTtaaa                                                                                                            >  6:103692/1‑138 (MQ=255)
                             agtcagtcTATCTTTTTTGATAAAAGAATGTATCGGCTGGGACTAGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGctc                                                                                                    <  1:134173/139‑1 (MQ=255)
                             agtcagtcTATCTTTTTTGATAAAAGAATGTATCGGCTGGGACTAGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGctc                                                                                                    <  5:313704/139‑1 (MQ=255)
                             agtcagtcTATCTTTTTTGATAAAAGAATGTATCGGCTGGGACTAGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGctc                                                                                                    <  6:368623/139‑1 (MQ=255)
                                  gtcTATCTTTTTTGATAAAAGAATGTATCGGCTGGGACTAGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCt                                                                                               >  1:406119/1‑139 (MQ=255)
                                           ttttGATAAAAGAATGTATCGGCTGGGACTAGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCt                                                                                        <  4:118983/137‑1 (MQ=255)
                                           ttttGATAAAAGAATGTATCGGCTGGGACTAGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCt                                                                                        <  3:168790/137‑1 (MQ=255)
                                           ttttGATAAAAGAATGTATCGGCTGGGACTAGGCCAAATTTATCGGGATTGAAGATTTGCTCGGTGCTGCCCACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCttt                                                                                      >  7:123737/1‑139 (MQ=255)
                                                aTAAAAGAATGTATCGGCTGGGACTAGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTa                                                                                 <  6:412621/139‑1 (MQ=255)
                                                   aaaaaaTGTATCGGCTGGGACTAGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTaaaa                                                                              <  6:177379/139‑1 (MQ=255)
                                                   aaaGAATGTATCGGCTGGGACTAGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTaaaa                                                                              <  6:153629/139‑1 (MQ=255)
                                                   aaaGAATGTATAGGCTGGGACTAGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTaaaa                                                                              <  2:433449/139‑1 (MQ=255)
                                                                     gactaGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTaaaa                                                                              >  5:366412/5‑121 (MQ=255)
                                                                     gactaGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTaaaa                                                                              <  6:366412/117‑1 (MQ=255)
                                                                     gactaGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCgg                                                            >  3:376529/5‑139 (MQ=255)
                                                                       ctaGGCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGca                                                          <  1:29975/137‑1 (MQ=255)
                                                                          ggCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGcacac                                                       >  4:115067/1‑139 (MQ=255)
                                                                          ggCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGcacac                                                       >  7:201869/1‑139 (MQ=255)
                                                                          ggCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGcac                                                         <  7:43251/137‑1 (MQ=255)
                                                                          ggCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCACTTCCTTCGCGCTTTCTGTAAAATAAATAAAAACATTCCGGcacac                                                       >  2:252732/1‑139 (MQ=255)
                                                                           gCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAATTACATTGCGGcacac                                                       >  4:31594/1‑138 (MQ=255)
                                                                           gCCAAATTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGcacac                                                       >  2:253269/1‑138 (MQ=255)
                                                                               aaTTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCa                                                                                                                                >  2:276758/1‑61 (MQ=255)
                                                                               aaTTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCa                                                                                                                                <  1:276758/61‑1 (MQ=255)
                                                                               aaTTTCTCGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGCACACGAtt                                                   >  5:108278/1‑138 (MQ=255)
                                                                                    ctcGGGATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTACATTCTTCTTCAAGCTATGTGCCAGTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGCACACGATTAAGTc                                              >  7:8559/1‑138 (MQ=255)
                                                                                       gggATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGCACACGATTAAGTCa                                             <  2:26750/135‑1 (MQ=255)
                                                                                         gATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGCACACGATTAAGTCAAAGTc                                        <  5:421213/139‑1 (MQ=255)
                                                                                         gATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGCACACGATTAAGTCAAAGTc                                        <  2:105339/139‑1 (MQ=255)
                                                                                         gATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGCACACGATTAAGTCAAAGTc                                        <  3:115067/139‑1 (MQ=255)
                                                                                         gATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGCACACGATTAAGTCAAAGTc                                        <  2:347858/139‑1 (MQ=255)
                                                                                         gATTGAAGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGCACACGATTAAGTCAAAGTc                                        <  2:39613/139‑1 (MQ=255)
                                                                                              aaGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGCACACGATTAAGTCAAAGTCTTGtt                                   >  1:133478/1‑139 (MQ=255)
                                                                                              aaGATTTGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGCACACGATTAAGTCAAAGTCTTGt                                    <  1:253269/138‑1 (MQ=255)
                                                                                                   ttGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGCACACGATTAAGTCAAAGTCTTGTTCATaa                              >  7:125756/1‑139 (MQ=255)
                                                                                                   ttGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGCACACGATTAAGTCAAAGTCTTGTTCATaa                              >  3:305137/1‑139 (MQ=255)
                                                                                                    tGCTCGGTGCTGCCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGCACACGATTAAGTCAAAGTCTTGTTCATaa                              <  8:125756/138‑1 (MQ=255)
                                                                                                            gctgcCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATTCAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGCACACGATTAAGTCAAAGTCTTGTTCATAACGATCCGcc                     <  7:112268/139‑1 (MQ=255)
                                                                                                             ctgcCGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGCACACGATTAAGTCAAAGTCTTGTTCATAACGATCCGCCa                    <  7:239346/139‑1 (MQ=255)
                                                                                                                ccGACAAAAAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGCACACGATTAAGTCAAAGTCTTGTTCATAACGATCCGCCAgc                  >  1:60363/1‑137 (MQ=255)
                                                                                                                   aCAAAAAGAACTCCATTCTTCATCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGCACACGATTAAGTCAAAGTCTTGTTCATAACGATCCGCCAgcaaat              >  6:114764/1‑134 (MQ=255)
                                                                                                                     aaaaAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGCACACGATTAAGTCAAAGTCTTGTTCATAACGATCCGCCAGCAAATtg            >  2:442834/1‑139 (MQ=255)
                                                                                                                     aaaaAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGCACACGATTAAGTCAAAGTCTTGTTCATAACGATCCGCCAGCAAATtg            >  7:137227/1‑139 (MQ=255)
                                                                                                                     aaaaAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGCACACGATTAAGTCAAAGTCTTGTTCATAACGATCCGCCAGCAAATtg            >  3:111693/1‑139 (MQ=255)
                                                                                                                     aaaaAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGCACACGATTAAGTCAAAGTCTTGTTCATAACGATCCGCCAGCAAATtg            >  1:151721/1‑139 (MQ=255)
                                                                                                                     aaaaAGAACTCCATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGCACACGATTAAGTCAAAGTCTTGTTAATAACGATCCGCCAGCAAATtg            >  5:254012/1‑139 (MQ=255)
                                                                                                                     aaaaAGAACTCCAATCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTACTTCGCGCTTTATGTAAAATAAATAAATACATAGAGGCACAAGATTAAGTAAAACTCTTGTTCAAAAAGATCCGCCAGCAAATtg            >  7:2940/1‑139 (MQ=255)
                                                                                                                                cATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGca                                                          <  1:74885/82‑1 (MQ=255)
                                                                                                                                cATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGca                                                          >  2:74885/1‑82 (MQ=255)
                                                                                                                                cATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGCACTCGATTAAGTCAAAGTCTTGTTCATAACGATCCGCCAGCAAATTGTGCTTTTTGa  <  8:123737/138‑1 (MQ=255)
                                                                                                                                cATTCTTCTTCAAGCTATGTGCCATTTTTAAATACAGCTCTTCCTTCGCGCTTTCTGTAAAATAAATAAATACATTGCGGCACACGATTAAGTCAAAGTCTTGTTCATAACGATCCGCCAGCAAATTGTGCTTTTTGa  <  8:201869/138‑1 (MQ=255)
                                                                                                                                       |                                                                                                                                  
AAACTACTATAACATATTTTTCAGCAAAAAGTCAGTCTATCTTTTTTGATAAAAGAATGTATCGGCTGGAGCCAGGCCAAATTTCTCCGGATTGAAGATTTGCTCGGTGCTGCCGACAAATAGGACTCCATTCTTTTTCAAGCTATGTGCCATTTTTAAATAAAGCTCTTCCTTGGCGCTTTCTGTAAAATAAATAAATACATTGCGGCACACAATTAAGTCAAAGTCTTGTTCATAACGATCAGCCAGTAGATTGTGCTTTTTGA  >  CP006881/2198176‑2198441

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A