Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,716,150 |
A→G |
T88T (ACT→ACC) |
ydhA ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,716,150 | 0 | A | G | 98.8%
| 504.9
/ ‑2.6
| 161 | T88T (ACT→ACC) | ydhA | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (1/1); new base G (93/66); total (94/67) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.66e-01 |
Only 100 of 166 total aligned reads displayed.
CGCTATTGTGCGCCGCCCCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACAGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGATGCAGTAG > NC_000913/1716061‑1716239
|
cGCTATTGTGCGCCGCCCCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTc > 1:4509080/1‑93 (MQ=255)
cGCTATTGTGCGCCGCCCCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTc < 2:2170587/93‑1 (MQ=255)
gCTATTGTGCGCCGCCCCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCg > 2:1911426/1‑93 (MQ=255)
cTATTGTGCGCCGCCCCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGc > 1:157065/1‑93 (MQ=255)
cTATTGTGCGCCGCCCCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGc > 2:1757198/1‑93 (MQ=255)
tATTGTGCGCCGCCCCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCt > 2:1844234/1‑93 (MQ=255)
aTTGTGCGCCGCCCCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCtt < 1:1223381/93‑1 (MQ=255)
ttGTGCGCCGCCCCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTc < 2:133601/93‑1 (MQ=255)
tgCGCCGCCCCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATc < 2:2449436/93‑1 (MQ=255)
tgCGCCCACCCAGCAAAAAGCCCAACGCTGTGGATTTTGTAACTAACAGTTATTCAAGACGATGCGGTCGTTTTTATAGACGGTCGCTTCATc < 2:2106831/93‑1 (MQ=255)
cgccgcCCCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGc < 1:709132/93‑1 (MQ=255)
cgccCCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCtt < 2:206858/93‑1 (MQ=255)
cccTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCg > 1:3927983/1‑93 (MQ=255)
ccTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGa > 1:111761/1‑93 (MQ=255)
ccTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGa > 2:1566713/1‑93 (MQ=255)
ccTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGa > 2:1970020/1‑93 (MQ=255)
ccTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGa > 1:189352/1‑93 (MQ=255)
ccTGGAAAAATCTCAACGCTGTGGAGTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCgc > 1:1557663/1‑92 (MQ=255)
cTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGAc > 1:2275083/1‑93 (MQ=255)
cTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGAc > 1:2945481/1‑93 (MQ=255)
cTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGAc > 1:3038972/1‑93 (MQ=255)
cTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGAc > 2:3169006/1‑93 (MQ=255)
tGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGAcc > 2:2368098/1‑93 (MQ=255)
tGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGAcc > 2:4208653/1‑93 (MQ=255)
ggAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCa > 2:1270480/1‑93 (MQ=255)
ggAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCa < 2:1156178/93‑1 (MQ=255)
ggAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCa < 2:731664/93‑1 (MQ=255)
ggAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCa > 1:3576701/1‑93 (MQ=255)
ggAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCa > 1:3457167/1‑93 (MQ=255)
gAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAg > 2:3495430/1‑93 (MQ=255)
aaaaTCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGaa > 2:2505967/1‑93 (MQ=255)
aaaTCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCTCTTCATCGCCTTTCGACCAGaaa > 2:2604679/1‑93 (MQ=255)
aaTCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGaaaa > 2:2332740/1‑93 (MQ=255)
aTCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGTTCGCTTCAGCGCCTGTCGACCAGaaacc > 1:1461589/1‑91 (MQ=255)
aTCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAAc > 1:4719698/1‑93 (MQ=255)
aaCGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGa > 2:2878544/1‑93 (MQ=255)
aaCGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGa < 1:723742/93‑1 (MQ=255)
aaCGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGa < 2:3765024/93‑1 (MQ=255)
aaCGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGa > 1:3897044/1‑93 (MQ=255)
aCGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGAt > 2:4337092/1‑93 (MQ=255)
aCGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGACTTTCGACCAGAAAACATAGAt > 1:1224050/1‑93 (MQ=255)
cGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGAtt < 1:1502351/93‑1 (MQ=255)
cTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTcc > 1:2849081/1‑93 (MQ=255)
cTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTcc < 1:2776270/93‑1 (MQ=255)
gtgGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGt > 2:3004100/1‑93 (MQ=255)
tgGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTc < 1:531801/93‑1 (MQ=255)
ggATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCa < 1:4585648/93‑1 (MQ=255)
aTTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAgt < 2:1881882/93‑1 (MQ=255)
tttGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAgtga > 2:3826790/1‑92 (MQ=255)
tggTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTa < 2:2285254/91‑1 (MQ=255)
gTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAAc > 2:3902819/1‑93 (MQ=255)
gTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAAc > 2:3422084/1‑93 (MQ=255)
gTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAAc < 1:3181263/93‑1 (MQ=255)
gTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAAc < 2:161489/93‑1 (MQ=255)
aCTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAAcgcg > 2:1270805/1‑93 (MQ=255)
tGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAAcgcgcg > 2:3044967/1‑93 (MQ=255)
aCAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGcc < 2:2736848/93‑1 (MQ=255)
aGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCag > 2:3795825/1‑93 (MQ=255)
aGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCag > 2:4535172/1‑93 (MQ=255)
aGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCag > 1:879689/1‑93 (MQ=255)
gTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCaga < 2:2693359/93‑1 (MQ=255)
tttaaaGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGc < 1:2024718/89‑1 (MQ=255)
aTTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAggt > 1:4081600/1‑92 (MQ=255)
ttCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCt > 2:1636880/1‑93 (MQ=255)
ttCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCt > 1:881430/1‑93 (MQ=255)
ttCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCt > 1:2388329/1‑93 (MQ=255)
tCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTg > 2:4231033/1‑93 (MQ=255)
tCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTg > 2:4231034/1‑93 (MQ=255)
aaGACGATGCGGTCGCGTTTATAGACGGTCGCTTTATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGaa < 2:499393/93‑1 (MQ=255)
aaGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGaa > 2:3551148/1‑93 (MQ=255)
aGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGaaa < 2:2506983/93‑1 (MQ=255)
gACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAAt < 2:2075385/93‑1 (MQ=255)
cGATGCGGGCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGGGTAACGCGCGCCAGAGGCTGAAATGc > 2:3293980/1‑93 (MQ=255)
gATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGcc > 2:4578874/1‑93 (MQ=255)
aTGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGccc < 2:3632776/93‑1 (MQ=255)
aTGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGccc < 2:365412/93‑1 (MQ=255)
aTGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGccc < 2:2421352/93‑1 (MQ=255)
tGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCt > 1:2551358/1‑93 (MQ=255)
tGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCt > 1:404221/1‑93 (MQ=255)
gCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTg < 2:4018474/93‑1 (MQ=255)
gCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTg > 1:763007/1‑93 (MQ=255)
cGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGt < 1:3777350/93‑1 (MQ=255)
ggTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGtt > 1:2537287/1‑93 (MQ=255)
gTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGaaa > 1:3792699/1‑83 (MQ=255)
gTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGttt < 2:32393/93‑1 (MQ=255)
gTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGttt < 1:3099187/93‑1 (MQ=255)
gTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGttt > 2:642196/1‑93 (MQ=255)
gTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGttt < 1:4470358/93‑1 (MQ=255)
gTCGCGTTGATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTACCGCGCGCCAGAGGCTGAAATGCCCTGttt < 2:3976831/93‑1 (MQ=255)
cgcgTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTga < 1:1145077/93‑1 (MQ=255)
cgTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTgaga < 2:445025/93‑1 (MQ=255)
gTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGAt < 1:1508424/93‑1 (MQ=255)
ttATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGATGc > 1:2883973/1‑93 (MQ=255)
ttATAGACAGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGATGc < 1:2009011/93‑1 (MQ=255)
tataGACGGTCGCTTCATCGCCTGTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGATGCa < 1:2376244/93‑1 (MQ=255)
ataGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGATGCag < 2:3876127/93‑1 (MQ=255)
taGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGATGCagt > 1:2416384/1‑93 (MQ=255)
taGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGATGCagt > 1:672448/1‑93 (MQ=255)
aGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGATGCagta < 1:3422580/93‑1 (MQ=255)
gACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGATGCagtag < 1:1665442/93‑1 (MQ=255)
|
CGCTATTGTGCGCCGCCCCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACAGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGATGCAGTAG > NC_000913/1716061‑1716239
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTGACGCTATTGTGCGCCGCCCCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACAGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGATGCAGTAGTTGA > NC_000913/1716057‑1716243
|
GTGACGCTATTGTGCGCCGCCCCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACG > SRR4302544.3684916/1‑94 (MQ=60)
GACGCTATTGTGCGCCGCCCCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGT < SRR4302544.4373039/94‑1 (MQ=60)
ACGCTATTGTGCGCCGCCCCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTC > SRR4302544.4554284/1‑94 (MQ=60)
GCTATTGTGCGCCGCCCCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGC > SRR4302544.158604/1‑94 (MQ=60)
CTATTGTGCGCCGCCCCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCT < SRR4302544.1961816/94‑1 (MQ=60)
ATTGTGCGCCGCCCCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTC < SRR4302544.1235483/94‑1 (MQ=60)
CGCCGCCCCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCC < SRR4302544.716170/94‑1 (MQ=60)
GCCGCCCCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCT < SRR4302544.745297/94‑1 (MQ=60)
CCCCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCG > SRR4302544.3966992/1‑94 (MQ=60)
CCCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGC > SRR4302544.1573153/1‑94 (MQ=60)
CCCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGA > SRR4302544.112783/1‑94 (MQ=60)
CCCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGA > SRR4302544.191240/1‑94 (MQ=60)
CCCTGGAAAAATCTCAACGCTGTGGAGTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGC > SRR4302544.1573152/1‑94 (MQ=60)
CCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGAC > SRR4302544.2973776/1‑94 (MQ=60)
CCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGAC < SRR4302544.187311/94‑1 (MQ=60)
CCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGAC > SRR4302544.3068055/1‑94 (MQ=60)
CCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGAC < SRR4302544.3245474/94‑1 (MQ=60)
CCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGAC > SRR4302544.2296500/1‑94 (MQ=60)
CCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACAGTCGCTTCATCGCCTTTCGAC > SRR4302544.703839/1‑94 (MQ=60)
TGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCA > SRR4302544.3611008/1‑94 (MQ=60)
TGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCA > SRR4302544.3490162/1‑94 (MQ=60)
AAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAA > SRR4302544.1405940/1‑94 (MQ=60)
AATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGTTCGCTTCAGCGCCTGTCGACCAGAAACC > SRR4302544.1476087/1‑94 (MQ=60)
AATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAAC < SRR4302544.2056246/94‑1 (MQ=60)
AATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAAC > SRR4302544.4766303/1‑94 (MQ=60)
ATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACA > SRR4302544.4252733/1‑94 (MQ=60)
CTCATCGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATA < SRR4302544.1484510/94‑1 (MQ=60)
CTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATA < SRR4302544.3541532/94‑1 (MQ=60)
CAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGA > SRR4302544.2421859/1‑94 (MQ=60)
CAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGA > SRR4302544.3935748/1‑94 (MQ=60)
AACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGAT < SRR4302544.730857/94‑1 (MQ=60)
AACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGACTTTCGACCAGAAAACATAGAT > SRR4302544.1236157/1‑94 (MQ=60)
CGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTC < SRR4302544.1517217/94‑1 (MQ=60)
GCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCC > SRR4302544.2876603/1‑94 (MQ=60)
CTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCG < SRR4302544.2802973/94‑1 (MQ=60)
TGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCA < SRR4302544.1192359/94‑1 (MQ=60)
TGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCA < SRR4302544.537075/94‑1 (MQ=60)
TGATTGTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAG < SRR4302544.3059309/94‑1 (MQ=60)
GGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAG < SRR4302544.4631302/94‑1 (MQ=60)
GGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAG < SRR4302544.394617/94‑1 (MQ=60)
GGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAG > SRR4302544.3633806/1‑94 (MQ=60)
TGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAAC < SRR4302544.410041/94‑1 (MQ=60)
GTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACG < SRR4302544.3211534/94‑1 (MQ=60)
CTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCG > SRR4302544.295580/1‑94 (MQ=60)
CAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAG < SRR4302544.3883728/94‑1 (MQ=60)
CAGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAG > SRR4302544.888409/1‑94 (MQ=60)
AGTTATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGA > SRR4302544.2807661/1‑94 (MQ=60)
TATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGT > SRR4302544.4122206/1‑94 (MQ=60)
tttaAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCT < SRR4302544.2044350/90‑1 (MQ=60)
ATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCT > SRR4302544.2410945/1‑94 (MQ=60)
ATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCT > SRR4302544.3361350/1‑94 (MQ=60)
ATTCAAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCT > SRR4302544.890165/1‑94 (MQ=60)
AAGACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAA > SRR4302544.1526564/1‑94 (MQ=60)
AAGACGATGCGGTACCGATTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAA < SRR4302544.56030/94‑1 (MQ=60)
GACTATGCGGTCCCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATG < SRR4302544.2315303/94‑1 (MQ=60)
GACGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATG > SRR4302544.256099/1‑94 (MQ=60)
CGATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCC > SRR4302544.4611176/1‑94 (MQ=60)
ATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCT > SRR4302544.882798/1‑94 (MQ=60)
ATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCT > SRR4302544.408323/1‑94 (MQ=60)
ATGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCT > SRR4302544.2575850/1‑94 (MQ=60)
TGCGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTG > SRR4302544.770446/1‑94 (MQ=60)
CGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTT < SRR4302544.3814776/94‑1 (MQ=60)
CGGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTT > SRR4302544.2561657/1‑94 (MQ=60)
GGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTT > SRR4302544.4719548/1‑94 (MQ=60)
GGTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGAGTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATagatataag > SRR4302544.3830250/1‑85 (MQ=60)
GTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTG < SRR4302544.4515315/94‑1 (MQ=60)
GTCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTG < SRR4302544.3128696/94‑1 (MQ=60)
TCGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGA < SRR4302544.3138447/94‑1 (MQ=60)
CGCGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAG < SRR4302544.1156467/94‑1 (MQ=60)
CGTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGAT < SRR4302544.929965/94‑1 (MQ=60)
GTTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGATG < SRR4302544.1523376/94‑1 (MQ=60)
GTTGATAGACGGTCGCTCCATCGCCTGTCGACCAGACAACATAGATTCCGTCAGCGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGATG < SRR4302544.811089/94‑1 (MQ=60)
TTTATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGATGC > SRR4302544.2911789/1‑94 (MQ=60)
TTATAGACAGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGATGCA < SRR4302544.2028532/94‑1 (MQ=60)
TATAGACGGTCGCTTCATCGCCTGTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGATGCAG < SRR4302544.2398743/94‑1 (MQ=60)
ATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGATGCAGT > SRR4302544.679090/1‑94 (MQ=60)
ATAGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGATGCAGT > SRR4302544.2439383/1‑94 (MQ=60)
AGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGATGCAGTAG < SRR4302544.3455306/94‑1 (MQ=60)
AGACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGATGCAGTAG < SRR4302544.2644825/94‑1 (MQ=60)
GACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGATGCAGTAGT < SRR4302544.1681846/94‑1 (MQ=60)
ACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGATGCAGTAGTT < SRR4302544.3803060/94‑1 (MQ=60)
ACGGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGATGCAGTAGTT < SRR4302544.983690/94‑1 (MQ=60)
GGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGATGCAGTAGTTGA < SRR4302544.3097737/94‑1 (MQ=60)
GGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGATGCAGTAGTTGA > SRR4302544.2709907/1‑94 (MQ=60)
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GTGACGCTATTGTGCGCCGCCCCTGGAAAAATCTCAACGCTGTGGATTTTGTAACTGACAGTTATTCAAGACGATGCGGTCGCGTTTATAGACAGTCGCTTCATCGCCTTTCGACCAGAAAACATAGATTCCGTCAGTGTAACGCGCGCCAGAGGCTGAAATGCCCTGTTTGAGATGCAGTAGTTGA > NC_000913/1716057‑1716243
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
