Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,721,938 |
A→G |
V598V (GTA→GTG) |
b1645 → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,721,938 | 0 | A | G | 96.8%
| 473.8
/ 3.4
| 157 | V598V (GTA→GTG) | b1645 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (3/2); new base G (66/86); total (69/88) |
| Fisher's exact test for biased strand distribution p-value = 6.55e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.10e-01 |
Only 100 of 162 total aligned reads displayed.
TTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAG > NC_000913/1721849‑1722028
|
ttaCGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCgg < 1:3073900/93‑1 (MQ=255)
ttaCGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCgg < 1:354210/93‑1 (MQ=255)
ttaCGCGGGGGTGTGGTGCTGCTGAACTGTTTTCATGTTGTTTAGCTATAGGGACACTGGGAAGAGCGGTCCGATCAGTTTTCGCGTGTGCgg > 2:3431881/1‑93 (MQ=255)
taCGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCggg < 1:1716272/93‑1 (MQ=255)
taCGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCggg < 2:3637505/93‑1 (MQ=255)
aCGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGa < 2:2667102/93‑1 (MQ=255)
aCGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGa < 2:1915325/93‑1 (MQ=255)
cGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGAt < 2:1816971/93‑1 (MQ=255)
cGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGAt > 2:852586/1‑93 (MQ=255)
gCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGaca < 1:1332042/93‑3 (MQ=255)
gCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATa < 2:2121892/93‑1 (MQ=255)
tGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAAc < 1:3316485/93‑1 (MQ=255)
ggggTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACt < 2:1814297/93‑1 (MQ=255)
ggTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGt > 2:78676/1‑93 (MQ=255)
gtgtAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTa < 2:322175/93‑1 (MQ=255)
tgtAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTAt < 2:2488644/93‑1 (MQ=255)
tgtAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTAt > 1:2364241/1‑93 (MQ=255)
gtAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTAtt < 1:375106/93‑1 (MQ=255)
gTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCa > 2:3900879/1‑93 (MQ=255)
tgctgcTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCAc < 2:1711436/93‑1 (MQ=255)
gctgctGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACt < 1:533156/93‑1 (MQ=255)
ctgctgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTg > 1:4003558/1‑93 (MQ=255)
tgctgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGt > 2:3939547/1‑93 (MQ=255)
gctgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGtt < 1:4262098/93‑1 (MQ=255)
gctgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGtt < 2:4013395/93‑1 (MQ=255)
gctgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGtt > 1:299809/1‑93 (MQ=255)
tgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGc > 2:681253/1‑93 (MQ=255)
gAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCg > 2:114843/1‑93 (MQ=255)
aaCTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCgg > 2:3836494/1‑93 (MQ=255)
aaCTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCgg < 1:2483611/93‑1 (MQ=255)
tGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGa < 1:977802/93‑1 (MQ=255)
tGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGa > 1:1349231/1‑93 (MQ=255)
tGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGa > 1:4555804/1‑93 (MQ=255)
tGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGa < 1:4346578/93‑1 (MQ=255)
tGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGa > 1:2052652/1‑93 (MQ=255)
tGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGCATAACTGTATTTCACTGTTGCGGGGa < 2:3051256/93‑1 (MQ=255)
gTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAg < 1:4434149/93‑1 (MQ=255)
gTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAg < 2:2047310/93‑1 (MQ=255)
gTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAg > 2:4529888/1‑93 (MQ=255)
ttCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGt < 1:2157572/93‑1 (MQ=255)
ctcATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGtga > 2:3678470/1‑93 (MQ=255)
ctcATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGtga < 2:1974858/93‑1 (MQ=255)
tcATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGtgat > 1:1777590/1‑93 (MQ=255)
aTGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGtgatga < 1:243545/93‑1 (MQ=255)
tgttgtCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAtgag < 1:2404615/93‑1 (MQ=255)
tgttgtCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAtgag > 2:1601657/1‑93 (MQ=255)
tgttgtCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAtgag < 2:261375/93‑1 (MQ=255)
tgttgtCTGGCAATTGCGCGACTGGGAATCGCGGTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAtgag < 1:4566839/93‑1 (MQ=255)
gttgtCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAtgagt < 2:958914/93‑1 (MQ=255)
ttgtCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAtgagtg > 2:4446596/1‑93 (MQ=255)
tgtCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAtgagtga < 2:1863297/93‑1 (MQ=255)
tCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGc < 2:1292344/93‑1 (MQ=255)
tCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGc < 2:4176839/93‑1 (MQ=255)
cTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCAAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCg < 1:1649754/93‑1 (MQ=255)
ggCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTg > 2:2547997/1‑93 (MQ=255)
gaaTTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGc < 2:1242153/92‑1 (MQ=255)
cAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGc > 1:2374479/1‑93 (MQ=255)
aaTTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCg > 1:3936748/1‑93 (MQ=255)
ttGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGtt > 1:3284668/1‑93 (MQ=255)
tGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTc < 1:3885295/93‑1 (MQ=255)
gcgcGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCa < 2:2504904/93‑1 (MQ=255)
gcgcGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCa < 1:129345/93‑1 (MQ=255)
gcgACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCCGc > 2:3249103/1‑93 (MQ=255)
cgACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAGCTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGGGTGGCGTTCAGCa > 1:1089962/1‑93 (MQ=255)
gACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCaa > 1:855736/1‑93 (MQ=255)
gACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCaa > 1:3128470/1‑93 (MQ=255)
gggAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAAt > 2:539809/1‑93 (MQ=255)
gggAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAAt < 2:4668391/93‑1 (MQ=255)
gggAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAAt > 2:2180639/1‑93 (MQ=255)
aaTCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCAc < 1:1654204/93‑1 (MQ=255)
aTCTCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACt < 1:100294/93‑1 (MQ=255)
aTCGGGTTCGGATCCTTTATCGCGAGTGCGGGATAACTGTATTTCACTGGTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACt < 1:3673183/93‑1 (MQ=255)
aTCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACt < 2:565643/93‑1 (MQ=255)
cgcgTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTgg < 2:3571292/93‑1 (MQ=255)
gcgTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTggg > 1:2634147/1‑92 (MQ=255)
gcgTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTggc < 1:886839/93‑1 (MQ=255)
cgTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTggcg < 1:3369180/93‑1 (MQ=255)
cgTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTggcg < 1:3369179/93‑1 (MQ=255)
cgTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTggcg < 2:334711/93‑1 (MQ=255)
ttCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTggcggc > 1:794902/1‑93 (MQ=255)
ttCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTggcggc > 1:1855816/1‑93 (MQ=255)
ttCCGATCCGTTATCGCGAGAGCGGGATAACTGTATTTCACTGCTGCGGGGAGCGATGAGTGAGCGTGGCGGTCAGCAAAAATGACTggcggc > 2:4234291/1‑93 (MQ=255)
tcggATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGcc < 1:4342577/90‑1 (MQ=255)
cGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCcac < 1:4286580/93‑1 (MQ=255)
cGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCcac > 1:1184515/1‑93 (MQ=255)
gATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCcaca > 1:2871896/1‑93 (MQ=255)
tCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACt < 1:1177142/93‑1 (MQ=255)
cGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTg < 2:1460676/93‑1 (MQ=255)
cGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTg > 1:4729297/1‑93 (MQ=255)
cGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTg > 2:2889711/1‑93 (MQ=255)
ttATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTgaa < 2:4382456/93‑1 (MQ=255)
tATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTgaag > 2:3378090/1‑93 (MQ=255)
aTCGCGAGTGCGGGATAACTGAATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTgaaga > 2:4672624/1‑93 (MQ=255)
tCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTgaagaa < 1:32394/93‑1 (MQ=255)
gcgAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAAtt < 2:1116478/93‑1 (MQ=255)
gAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTaa > 1:2111184/1‑92 (MQ=255)
gAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTaa > 2:3445645/1‑92 (MQ=255)
gAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTAc < 1:4151661/93‑1 (MQ=255)
aGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAATAATCACTGGCGGCCACACTTGAAGAATTACa > 2:3213874/1‑93 (MQ=255)
aGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACa < 2:302376/93‑1 (MQ=255)
|
TTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAG > NC_000913/1721849‑1722028
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TATTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGCGG > NC_000913/1721847‑1722031
|
TATTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCG < SRR4302544.329834/94‑1 (MQ=60)
TTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGG < SRR4302544.357834/94‑1 (MQ=60)
TTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGG < SRR4302544.1313054/94‑1 (MQ=60)
TTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGG < SRR4302544.3103197/94‑1 (MQ=60)
TACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGA < SRR4302544.1733146/94‑1 (MQ=60)
GCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGACAA < SRR4302544.1345154/94‑1 (MQ=60)
TGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACT < SRR4302544.3348078/94‑1 (MQ=60)
GGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTA < SRR4302544.1288774/94‑1 (MQ=60)
GTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTAT > SRR4302544.2386622/1‑94 (MQ=60)
GTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTT < SRR4302544.378934/94‑1 (MQ=60)
GTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGGTATCGCGAGTGCGGGATAACTGTATTT > SRR4302544.2441348/1‑94 (MQ=60)
GTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCAC > SRR4302544.2400638/1‑94 (MQ=60)
tctcctaAACTGTTCTCATGTTGTCTGGGAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTG < SRR4302544.1569134/87‑1 (MQ=60)
GCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTG < SRR4302544.538438/94‑1 (MQ=60)
GCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTG < SRR4302544.2741360/94‑1 (MQ=60)
GCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTG > SRR4302544.4043399/1‑94 (MQ=60)
TGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTT > SRR4302544.302911/1‑94 (MQ=60)
TGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTT < SRR4302544.2097139/94‑1 (MQ=60)
GCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTG < SRR4302544.1146319/94‑1 (MQ=60)
GCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTG < SRR4302544.4305571/94‑1 (MQ=60)
GCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTG < SRR4302544.3413721/94‑1 (MQ=60)
GAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGG < SRR4302544.898096/94‑1 (MQ=60)
AACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGG < SRR4302544.2507393/94‑1 (MQ=60)
AACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGG < SRR4302544.2300266/94‑1 (MQ=60)
CTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGA > SRR4302544.2072409/1‑94 (MQ=60)
CTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGA > SRR4302544.1362601/1‑94 (MQ=60)
CTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGA > SRR4302544.4601264/1‑94 (MQ=60)
TGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAG < SRR4302544.987384/94‑1 (MQ=60)
TGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAG < SRR4302544.4390759/94‑1 (MQ=60)
TGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAG < SRR4302544.3177155/94‑1 (MQ=60)
GTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGTTCCGTTATTGCGAGGGCGGGATAATTGTGTTTCATTGTTGCGGGCAGT > SRR4302544.3593244/1‑94 (MQ=60)
GTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGT > SRR4302544.417960/1‑94 (MQ=60)
GTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGT < SRR4302544.3289484/94‑1 (MQ=60)
GTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGT < SRR4302544.4478881/94‑1 (MQ=60)
GTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGG > SRR4302544.3593243/1‑94 (MQ=60)
TTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTG < SRR4302544.2178071/94‑1 (MQ=60)
CTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAT > SRR4302544.1794983/1‑94 (MQ=60)
TCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATG < SRR4302544.3048807/94‑1 (MQ=60)
ATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAG < SRR4302544.246080/94‑1 (MQ=60)
TGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGT < SRR4302544.2427440/94‑1 (MQ=60)
TGTTGTCTGGCAATTGCGCGACTGGGAATCGCGGTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGT < SRR4302544.4612368/94‑1 (MQ=60)
TGTCTGACAATTGAGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAG < SRR4302544.3968929/94‑1 (MQ=60)
GTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGC > SRR4302544.3373587/1‑94 (MQ=60)
CTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCAAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGT < SRR4302544.1666030/94‑1 (MQ=60)
GGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGG < SRR4302544.2656744/94‑1 (MQ=60)
GCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGC > SRR4302544.2396956/1‑94 (MQ=60)
CAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCG > SRR4302544.3975844/1‑94 (MQ=60)
ATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTT > SRR4302544.3315970/1‑94 (MQ=60)
TGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCA < SRR4302544.3923882/94‑1 (MQ=60)
GCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAG < SRR4302544.130534/94‑1 (MQ=60)
GCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAGCTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGGGTGGCGTTCAGCA > SRR4302544.1100804/1‑94 (MQ=60)
CGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAA > SRR4302544.864203/1‑94 (MQ=60)
CGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAA > SRR4302544.3158195/1‑94 (MQ=60)
ACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAA > SRR4302544.1965329/1‑94 (MQ=60)
TGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAAT > SRR4302544.4375144/1‑94 (MQ=60)
GAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCAC < SRR4302544.1767986/94‑1 (MQ=60)
AATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACT < SRR4302544.1670520/94‑1 (MQ=60)
ATCTCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTG < SRR4302544.101215/94‑1 (MQ=60)
ATCGGGTTCGGATCCTTTATCGCGAGTGCGGGATAACTGTATTTCACTGGTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTG < SRR4302544.3709821/94‑1 (MQ=60)
CGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGG > SRR4302544.767976/1‑94 (MQ=60)
CGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGG > SRR4302544.2659395/1‑94 (MQ=60)
GCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCG < SRR4302544.895629/94‑1 (MQ=60)
CCGTTCCGATCCGTTATCTGCAGTGCGAGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCG < SRR4302544.1050662/94‑1 (MQ=60)
CGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGG < SRR4302544.3401339/94‑1 (MQ=60)
CGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGG < SRR4302544.3401340/94‑1 (MQ=60)
GTTCCGATCTGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGC > SRR4302544.430865/1‑94 (MQ=60)
GTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGC > SRR4302544.1873763/1‑94 (MQ=60)
GTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGC > SRR4302544.802597/1‑94 (MQ=60)
GTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGC > SRR4302544.802595/1‑94 (MQ=60)
TCGGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCA < SRR4302544.4386749/94‑1 (MQ=60)
CCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCAC > SRR4302544.1196294/1‑94 (MQ=60)
CGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACA < SRR4302544.4330365/94‑1 (MQ=60)
CGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACA > SRR4302544.2899615/1‑94 (MQ=60)
TCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTT < SRR4302544.1188877/94‑1 (MQ=60)
CCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTG > SRR4302544.4775962/1‑94 (MQ=60)
GTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAA > SRR4302544.1701551/1‑94 (MQ=60)
TATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGA > SRR4302544.4492541/1‑94 (MQ=60)
TCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAAT < SRR4302544.32712/94‑1 (MQ=60)
CGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATT > SRR4302544.4771165/1‑94 (MQ=60)
CGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATT < SRR4302544.4403286/94‑1 (MQ=60)
CGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTAA > SRR4302544.2131486/1‑94 (MQ=60)
CGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTAC < SRR4302544.3827853/94‑1 (MQ=60)
GAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACA < SRR4302544.4192774/94‑1 (MQ=60)
AGTACGGGATAACTGTATTTCACTGTTGCGGGGAGCGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAG > SRR4302544.1609526/1‑94 (MQ=60)
TGCGGGATAACTGTATTTCACTGTTGCGTGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAAGCACTGGCGGCCACACTTGAAGAATTACAGCG < SRR4302544.2884695/94‑1 (MQ=60)
TGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGCG < SRR4302544.2884696/94‑1 (MQ=60)
GCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGCGG < SRR4302544.2130490/94‑1 (MQ=60)
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TATTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGCGG > NC_000913/1721847‑1722031
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
