Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,721,938 |
A→G |
V598V (GTA→GTG) |
b1645 → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,721,938 | 0 | A | G | 100.0%
| 692.7
/ NA
| 212 | V598V (GTA→GTG) | b1645 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (111/101); total (111/101) |
Only 100 of 219 total aligned reads displayed.
ATTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGCG > NC_000913/1721848‑1722030
|
attaCGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCg < 2:3425364/93‑1 (MQ=255)
ttaCGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCgg < 1:2713693/93‑1 (MQ=255)
ttaCGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCgg < 1:1523176/93‑1 (MQ=255)
aCGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGa < 1:196282/93‑1 (MQ=255)
cGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGAt > 2:2741804/1‑93 (MQ=255)
cGCTGGGGTGTAGTGCTGCTGAACTGTTCTAATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGAt < 1:1721124/93‑1 (MQ=255)
gCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATa < 2:6418051/93‑1 (MQ=255)
tGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAAc > 1:3503507/1‑93 (MQ=255)
ggggTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACt < 2:1601838/93‑1 (MQ=255)
ggggTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACt > 2:5804890/1‑93 (MQ=255)
gggTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTg < 1:379946/93‑1 (MQ=255)
ggTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGt < 1:6492142/93‑1 (MQ=255)
gtgtAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTa > 2:5151056/1‑93 (MQ=255)
gtgtAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTa < 2:4884276/93‑1 (MQ=255)
tgtAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTAt < 2:2473053/93‑1 (MQ=255)
gtAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGGTAACTGTAtt > 1:5653127/1‑93 (MQ=255)
gtAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTAtt > 2:4758304/1‑93 (MQ=255)
gtAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTAtt < 2:1662947/93‑1 (MQ=255)
gtAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTAtt < 2:448078/93‑1 (MQ=255)
gtAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTAtt < 2:358324/93‑1 (MQ=255)
tAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTAttt > 2:4465821/1‑93 (MQ=255)
aGTGCTGCTGAACTGTTCTCATGGTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTc < 1:5396252/93‑1 (MQ=255)
tgctgcTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCAc < 2:1005656/93‑1 (MQ=255)
tgctgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGt < 1:6199678/93‑1 (MQ=255)
tgctgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGt < 1:1669926/93‑1 (MQ=255)
gctgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGtt < 1:4648701/93‑1 (MQ=255)
gctgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGtt > 1:1377070/1‑93 (MQ=255)
ctgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTg > 1:1215010/1‑93 (MQ=255)
ctgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTg > 1:2265616/1‑93 (MQ=255)
ctgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTg > 2:1332738/1‑93 (MQ=255)
tgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGc > 1:318495/1‑93 (MQ=255)
tgAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGc < 2:693217/93‑1 (MQ=255)
gAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCg < 1:2210285/93‑1 (MQ=255)
aaCTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCgg < 2:4659553/93‑1 (MQ=255)
cTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCgggg > 2:2148718/1‑93 (MQ=255)
cTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGGTATCGCGAGTGCGGGATAACTGTATTTCACTGGTGCcggg > 1:2472709/1‑93 (MQ=255)
tGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCggggg > 2:2376058/1‑92 (MQ=255)
tGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGa < 1:100805/93‑1 (MQ=255)
gTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAg < 2:4730442/93‑1 (MQ=255)
ttCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGt < 1:775943/93‑1 (MQ=255)
ttCTCATGTTGTCTGGCAACTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGt > 2:2010817/1‑93 (MQ=255)
tctcATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGtg > 1:2144762/1‑93 (MQ=255)
ctcATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGtga < 2:485973/93‑1 (MQ=255)
tcATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGtgat > 1:2966884/1‑93 (MQ=255)
cATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGtgatg < 2:3310889/93‑1 (MQ=255)
aTGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGtgatga > 1:2318719/1‑93 (MQ=255)
aTGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGtgatga > 1:3382066/1‑93 (MQ=255)
tgttgtCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAtgag > 2:3819653/1‑93 (MQ=255)
tgttgtCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGAGAtgag > 1:2702047/1‑93 (MQ=255)
gttgtCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAtgagt > 2:5569141/1‑93 (MQ=255)
gttgtCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAtgagt < 1:3753943/93‑1 (MQ=255)
gttgtCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAtgagt < 2:5026619/93‑1 (MQ=255)
ttgtCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAtgagtg > 1:1251412/1‑93 (MQ=255)
gtCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAtgagtgag > 1:2961832/1‑93 (MQ=255)
ggCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTg < 1:4273149/93‑1 (MQ=255)
ggCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTg > 1:4896911/1‑93 (MQ=255)
ggCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTg > 2:6658858/1‑93 (MQ=255)
gCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTgg > 2:1149094/1‑93 (MQ=255)
gCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTgg < 1:5579796/93‑1 (MQ=255)
cAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGc < 2:155372/93‑1 (MQ=255)
aaTTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCg > 1:4489205/1‑93 (MQ=255)
ttGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGtt > 2:1821222/1‑93 (MQ=255)
tGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTc < 2:25441/93‑1 (MQ=255)
tGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTc > 1:4247138/1‑93 (MQ=255)
gcgcGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCa > 1:4773456/1‑93 (MQ=255)
gagcgACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCa < 2:6020641/91‑1 (MQ=255)
cgACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCa > 2:1935190/1‑93 (MQ=255)
cgACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCa > 2:797578/1‑93 (MQ=255)
gACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCaa > 1:4010724/1‑93 (MQ=255)
aCTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCaca > 1:578211/1‑91 (MQ=255)
cTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGTAGTGATGAGTGAGCGTGGCGTTCAGCaaaa < 1:1830757/93‑1 (MQ=255)
tGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCaaaaa > 2:6086412/1‑93 (MQ=255)
gAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAAtgc > 1:5566730/1‑91 (MQ=255)
aaTCGCGTGCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCAc < 1:5094610/93‑1 (MQ=255)
aTCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACt < 1:418196/93‑1 (MQ=255)
tCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTg < 2:4347956/93‑1 (MQ=255)
tCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTg > 1:929694/1‑93 (MQ=255)
cgcgTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTgg < 2:6344505/93‑1 (MQ=255)
cgcgTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTgg < 2:6179815/93‑1 (MQ=255)
gcgTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTggc > 2:1477463/1‑93 (MQ=255)
cgTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTggcg < 2:4267375/93‑1 (MQ=255)
ttCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTggcggc > 1:2373885/1‑93 (MQ=255)
ttCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTggcggc < 2:3077045/93‑1 (MQ=255)
tCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGcc < 1:4856272/93‑1 (MQ=255)
ccGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCACCAAAAATCACTGGCGGCca > 2:4099064/1‑93 (MQ=255)
gATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCcaca > 1:2526303/1‑93 (MQ=255)
gATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCcaca > 1:4405385/1‑93 (MQ=255)
tCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACt < 1:4609565/93‑1 (MQ=255)
tCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACt > 1:5932636/1‑93 (MQ=255)
gTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTga < 2:6028630/93‑1 (MQ=255)
gTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTga > 1:1561582/1‑93 (MQ=255)
ttATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGGAAAAATCACTGGCGGACACACTTgaa > 1:3615864/1‑93 (MQ=255)
tCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTgaagaa > 2:3473397/1‑93 (MQ=255)
tCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTgaagaa < 2:4022896/93‑1 (MQ=255)
cgcgAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAAt < 2:4624261/93‑1 (MQ=255)
cgAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTa > 1:3195608/1‑93 (MQ=255)
gAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTAc > 2:1762812/1‑93 (MQ=255)
gAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTAc < 1:2067045/93‑1 (MQ=255)
gAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTAc > 2:430354/1‑93 (MQ=255)
aCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGCg < 1:384892/93‑1 (MQ=255)
|
ATTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGCG > NC_000913/1721848‑1722030
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTTATTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGCGG > NC_000913/1721845‑1722031
|
GTTATTACGCGGGGGTGTAGTGCTGGTGAACTGTTCTCATGTTCTCTGGCAATTGCGCGCCTGGGAATCGCGTTCCGATCCGTTATCGCGAGTG < SRR4302536.2271129/94‑1 (MQ=60)
TTATTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGC < SRR4302536.6121837/94‑1 (MQ=60)
TATTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCG > SRR4302536.4396972/1‑94 (MQ=60)
TATTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCG > SRR4302536.3284150/1‑94 (MQ=60)
TTACGCTGGGGTGTAGTGCTGCTGACCTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGG < SRR4302536.3816189/94‑1 (MQ=60)
TTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGG < SRR4302536.2794637/94‑1 (MQ=60)
TTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGG < SRR4302536.6210538/94‑1 (MQ=60)
TTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGG < SRR4302536.1568003/94‑1 (MQ=60)
TTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGG < SRR4302536.3273753/94‑1 (MQ=60)
TACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGA > SRR4302536.5889220/1‑94 (MQ=60)
TACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGA > SRR4302536.4401210/1‑94 (MQ=60)
ACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGAT < SRR4302536.201442/94‑1 (MQ=60)
CGCTGGGGTGTAGTGCTGCTGAACTGTTCTAATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATA < SRR4302536.1770855/94‑1 (MQ=60)
CTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAAC > SRR4302536.3608061/1‑94 (MQ=60)
GGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTG > SRR4302536.5002467/1‑94 (MQ=60)
GGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGT < SRR4302536.389954/94‑1 (MQ=60)
GGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGT < SRR4302536.1281055/94‑1 (MQ=60)
GGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTA < SRR4302536.6685710/94‑1 (MQ=60)
GGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTA < SRR4302536.4760281/94‑1 (MQ=60)
GGCGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGAGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTA > SRR4302536.2221668/1‑94 (MQ=60)
GTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTAT > SRR4302536.2789332/1‑94 (MQ=60)
TGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGGTAACTGTATT > SRR4302536.5821130/1‑94 (MQ=60)
TAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTC < SRR4302536.3860373/94‑1 (MQ=60)
AGTTCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCA < SRR4302536.3442594/94‑1 (MQ=60)
AGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCA < SRR4302536.4619352/94‑1 (MQ=60)
AGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCA > SRR4302536.2495315/1‑94 (MQ=60)
AGTGCTGCTGAACTGTTCTCATGGTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCA < SRR4302536.5557393/94‑1 (MQ=60)
TGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACT < SRR4302536.4661535/94‑1 (MQ=60)
TGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTT < SRR4302536.1718363/94‑1 (MQ=60)
TGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTT > SRR4302536.1466792/1‑94 (MQ=60)
TGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTT > SRR4302536.237142/1‑94 (MQ=60)
TGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTT > SRR4302536.1418090/1‑94 (MQ=60)
TGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTT < SRR4302536.6384340/94‑1 (MQ=60)
GCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTG < SRR4302536.4788459/94‑1 (MQ=60)
GCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTG < SRR4302536.932205/94‑1 (MQ=60)
GCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTG > SRR4302536.1251503/1‑94 (MQ=60)
GCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTG > SRR4302536.2334245/1‑94 (MQ=60)
CTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGC > SRR4302536.326930/1‑94 (MQ=60)
TGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCG > SRR4302536.6042602/1‑94 (MQ=60)
GAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGG < SRR4302536.2277035/94‑1 (MQ=60)
AACTGTTCTCGTGTTGTCTGGCAATTGCGCGACTGGGAATGGCGTTCCGATCCGTTATCGCGAGGGCGGGATAACTGTATTTCACTGTTGCGGG > SRR4302536.2003309/1‑94 (MQ=60)
ACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGGTATCGCGAGTGCGGGATAACTGTATTTCACTGGTGCCGGG > SRR4302536.2547361/1‑94 (MQ=60)
CTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGC > SRR4302536.1026610/1‑94 (MQ=60)
TGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAG < SRR4302536.103499/94‑1 (MQ=60)
GTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGT < SRR4302536.1877141/94‑1 (MQ=60)
TTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTG < SRR4302536.6135709/94‑1 (MQ=60)
TTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTG > SRR4302536.2209132/1‑94 (MQ=60)
TTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTG < SRR4302536.798678/94‑1 (MQ=60)
TTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTG < SRR4302536.3508750/94‑1 (MQ=60)
TTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGCG > SRR4302536.4331362/1‑94 (MQ=60)
TCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGA < SRR4302536.4306767/94‑1 (MQ=60)
CTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAT > SRR4302536.3054273/1‑94 (MQ=60)
CTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGAT > SRR4302536.3054274/1‑94 (MQ=60)
TCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATG < SRR4302536.494682/94‑1 (MQ=60)
CATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGA > SRR4302536.513616/1‑94 (MQ=60)
CATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGA < SRR4302536.2507008/94‑1 (MQ=60)
CATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGA > SRR4302536.3482582/1‑94 (MQ=60)
CATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGA > SRR4302536.2389090/1‑94 (MQ=60)
ATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAG > SRR4302536.6445745/1‑94 (MQ=60)
ATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGAGATGAG > SRR4302536.2782654/1‑94 (MQ=60)
TGTTGTCTGGCAATTGCGCGACTGGCAATCTCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTCCGGGGAGTGATGAGT < SRR4302536.2621734/94‑1 (MQ=60)
TGTTGTCGGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGT > SRR4302536.5721379/1‑94 (MQ=60)
GTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTG < SRR4302536.3866097/94‑1 (MQ=60)
GTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTG > SRR4302536.1288983/1‑94 (MQ=60)
TGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAG < SRR4302536.3869345/94‑1 (MQ=60)
TGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAG < SRR4302536.4126901/94‑1 (MQ=60)
TGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAG > SRR4302536.3049077/1‑94 (MQ=60)
TGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTG < SRR4302536.4769234/94‑1 (MQ=60)
TGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTG > SRR4302536.3029368/1‑94 (MQ=60)
TGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTG > SRR4302536.5044191/1‑94 (MQ=60)
GGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGG < SRR4302536.4400529/94‑1 (MQ=60)
GCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGC < SRR4302536.5745856/94‑1 (MQ=60)
CAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCG > SRR4302536.4624009/1‑94 (MQ=60)
AATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGT > SRR4302536.3125439/1‑94 (MQ=60)
ATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTT > SRR4302536.138558/1‑94 (MQ=60)
ATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTT < SRR4302536.1048685/94‑1 (MQ=60)
TTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTC > SRR4302536.4373645/1‑94 (MQ=60)
TGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCA > SRR4302536.4917195/1‑94 (MQ=60)
CGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGC > SRR4302536.6912445/1‑94 (MQ=60)
CGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAA > SRR4302536.4129736/1‑94 (MQ=60)
GACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCACA > SRR4302536.592888/1‑94 (MQ=60)
ACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAA > SRR4302536.4822738/1‑94 (MQ=60)
CTGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGTAGTGATGAGTGAGCGTGGCGTTCAGCAAAAA < SRR4302536.1885943/94‑1 (MQ=60)
TGGGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAAT > SRR4302536.1708763/1‑94 (MQ=60)
GGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATgc > SRR4302536.5732475/1‑92 (MQ=60)
GGAATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCA > SRR4302536.2333191/1‑94 (MQ=60)
AATCGCGTGCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACT < SRR4302536.5246961/94‑1 (MQ=60)
ATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTG > SRR4302536.957088/1‑94 (MQ=60)
ATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTG < SRR4302536.1723111/94‑1 (MQ=60)
ATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTG > SRR4302536.5741626/1‑94 (MQ=60)
ATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTG < SRR4302536.3650629/94‑1 (MQ=60)
ATCGCGTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTG < SRR4302536.429221/94‑1 (MQ=60)
GTTCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGC > SRR4302536.2445804/1‑94 (MQ=60)
TCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCA < SRR4302536.2090298/94‑1 (MQ=60)
TCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCA > SRR4302536.158920/1‑94 (MQ=60)
TCCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCA < SRR4302536.5002404/94‑1 (MQ=60)
CCGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCAC < SRR4302536.4135687/94‑1 (MQ=60)
CGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACA > SRR4302536.4537118/1‑94 (MQ=60)
CGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACA > SRR4302536.3933354/1‑94 (MQ=60)
CGATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACA > SRR4302536.2602458/1‑94 (MQ=60)
GATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACAC > SRR4302536.5300488/1‑94 (MQ=60)
ATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACT > SRR4302536.2407938/1‑94 (MQ=60)
ATCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACT > SRR4302536.6109343/1‑94 (MQ=60)
TCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTT < SRR4302536.4748032/94‑1 (MQ=60)
TCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTT > SRR4302536.2568153/1‑94 (MQ=60)
TCCGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTT < SRR4302536.1675599/94‑1 (MQ=60)
CGTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGA > SRR4302536.1607443/1‑94 (MQ=60)
AGTTATCGCGAGTGCGGGATAACTGGATTTCACTGTTGCGGGGAGTGATGAGAGAGCGTGGCGTTCAGCAATAATCACTGGCGGCCACACTTGA > SRR4302536.5787696/1‑94 (MQ=60)
GTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGGAAAAATCACTGGCGGACACACTTGAA > SRR4302536.3723963/1‑94 (MQ=60)
GTTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAA > SRR4302536.2132326/1‑94 (MQ=60)
TTATCGCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAG < SRR4302536.5601226/94‑1 (MQ=60)
GCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACGCTTGAAGAATTA < SRR4302536.1952805/94‑1 (MQ=60)
GCGAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTA > SRR4302536.3289287/1‑94 (MQ=60)
GAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACA < SRR4302536.2129312/94‑1 (MQ=60)
GAGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACA > SRR4302536.2180804/1‑94 (MQ=60)
AGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAG > SRR4302536.6091103/1‑94 (MQ=60)
AGTGCGGGATAACTGTATTTCACTGTTGCGGGGAGGGATGAGGGAGCGTGGCGTGCAGCAAAAATCACTGGCGGCCCAACTTGAAGAATTACAG > SRR4302536.4378369/1‑94 (MQ=60)
GTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGC > SRR4302536.6292018/1‑94 (MQ=60)
GTGCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGC > SRR4302536.482811/1‑94 (MQ=60)
GCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGCGG < SRR4302536.4110394/94‑1 (MQ=60)
GCGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGCGG > SRR4302536.2951071/1‑94 (MQ=60)
ACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGCGG < SRR4302536.395043/94‑1 (MQ=60)
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GTTATTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGCGG > NC_000913/1721845‑1722031
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
