Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,839,484 |
A→G |
intergenic (‑51/‑30) |
b1758 ← / → b1759 |
putative cytochrome oxidase/hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,839,484 | 0 | A | G | 98.7%
| 481.6
/ ‑2.9
| 152 | intergenic (‑51/‑30) | b1758/b1759 | putative cytochrome oxidase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (1/1); new base G (76/74); total (77/75) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.11e-01 |
Only 100 of 155 total aligned reads displayed.
GTTTAATCCGGGGATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCATTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTTTACTCGC > NC_000913/1839394‑1839572
|
tttAATCCGGGGATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGttt < 1:2764028/93‑1 (MQ=255)
tAATCCGGGGATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGttttt < 2:421149/93‑1 (MQ=255)
aaTCCGGGGATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTc < 2:2899773/93‑1 (MQ=255)
aaTCCGGGGATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTc < 1:944530/93‑1 (MQ=255)
aaTCCGGGGATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTc < 2:695659/93‑1 (MQ=255)
aaTCCGGGGATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTc < 1:2110660/93‑1 (MQ=255)
cGGGGATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCtt < 2:3975816/93‑1 (MQ=255)
cGGGGATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCtt < 2:1452983/93‑1 (MQ=255)
cGGGGATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCtt > 1:3862768/1‑93 (MQ=255)
cGGGGATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCtt > 1:3388420/1‑93 (MQ=255)
ggggATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTa < 1:1004025/93‑1 (MQ=255)
ggATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATc > 1:2065385/1‑93 (MQ=255)
ggATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATc < 2:1076044/93‑1 (MQ=255)
ggATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATc < 2:4275484/93‑1 (MQ=255)
ggATGAAGATGGCGGTCTAACACAGGCACTCCTTAAATATAAAGCCTATCTGATTGAGCAACAGTGCGGATATTATAGCGTTTTTAGCATaaa < 2:4215512/93‑3 (MQ=255)
gATGAAGATGGCGGTCTAGTACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCt < 2:1668193/93‑1 (MQ=255)
gATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCt < 1:3561631/93‑1 (MQ=255)
gATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCt < 1:1538220/93‑1 (MQ=255)
tGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGc > 1:3072465/1‑93 (MQ=255)
tGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGc > 2:2774823/1‑93 (MQ=255)
aaGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGccc > 2:3828277/1‑93 (MQ=255)
aaGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGccc > 2:904069/1‑93 (MQ=255)
gATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCgt > 2:66412/1‑93 (MQ=255)
gATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCgt < 1:3731312/93‑1 (MQ=255)
gATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCgt < 1:4029567/93‑1 (MQ=255)
aTGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCgtg < 1:2021807/93‑1 (MQ=255)
ggCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCgtgtg > 2:3472456/1‑93 (MQ=255)
ggTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTaa > 1:420995/1‑93 (MQ=255)
ggTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTaa > 2:892090/1‑93 (MQ=255)
ggTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTaa > 1:1427965/1‑93 (MQ=255)
ggTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTaa < 1:3462360/93‑1 (MQ=255)
gTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAAt > 1:133160/1‑93 (MQ=255)
tCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAAtt > 1:599162/1‑93 (MQ=255)
tCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAAtt < 2:1947972/93‑1 (MQ=255)
cTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAAttt > 1:4146689/1‑93 (MQ=255)
tAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTACTTTa > 1:2676571/1‑93 (MQ=255)
aGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTAt > 1:3870889/1‑93 (MQ=255)
gCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATg < 1:4484912/93‑1 (MQ=255)
cacaGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGa > 1:2809503/1‑93 (MQ=255)
caGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGaaa > 1:878762/1‑93 (MQ=255)
caGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGaaa < 1:3161802/93‑1 (MQ=255)
aGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGaaaa < 2:1816578/93‑1 (MQ=255)
ggCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAAt > 1:3775587/1‑93 (MQ=255)
ggCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAAt < 1:3582851/93‑1 (MQ=255)
cACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGa > 2:3659415/1‑93 (MQ=255)
aCTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGAt > 1:130829/1‑93 (MQ=255)
tCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTg < 2:749698/93‑1 (MQ=255)
tCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTg > 2:1232050/1‑93 (MQ=255)
cTTAAATATAAAGCGTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGaa < 1:4730751/93‑1 (MQ=255)
cTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGaa > 2:3297141/1‑93 (MQ=255)
cTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGaa < 2:1465129/93‑1 (MQ=255)
cTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGaa > 1:2405172/1‑93 (MQ=255)
tAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAgt < 1:1819999/93‑1 (MQ=255)
aaTATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAgttg > 1:1418574/1‑93 (MQ=255)
taAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTgc > 1:4495099/1‑93 (MQ=255)
taAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTgc > 1:4706888/1‑93 (MQ=255)
taAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTgc < 2:365953/93‑1 (MQ=255)
taAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCATTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTgc > 1:4739378/1‑93 (MQ=255)
aaaGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTgcc > 2:1218706/1‑93 (MQ=255)
aaGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTgccg > 1:1922768/1‑93 (MQ=255)
aGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTgccgc > 2:4311222/1‑93 (MQ=255)
gCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTgccgcc > 2:1545621/1‑93 (MQ=255)
ccTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCca < 2:1579410/93‑1 (MQ=255)
cTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCcat > 1:2143264/1‑93 (MQ=255)
cTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCcat > 2:276685/1‑93 (MQ=255)
tttCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCcatc > 2:4020853/1‑93 (MQ=255)
tttCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCcatc < 1:1173077/93‑1 (MQ=255)
tttCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCcatc > 2:2288467/1‑93 (MQ=255)
tttCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCcatc > 1:2304185/1‑93 (MQ=255)
tCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCcatcat < 1:1828005/93‑1 (MQ=255)
cTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCAtt < 1:4179479/93‑1 (MQ=255)
gATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGa < 1:1761806/93‑1 (MQ=255)
gATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGa < 1:2506436/93‑1 (MQ=255)
aTTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGaa < 1:2876421/93‑1 (MQ=255)
ttGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAAc > 1:2913358/1‑93 (MQ=255)
ttGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAAc > 2:439930/1‑93 (MQ=255)
gCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGa > 1:3289012/1‑93 (MQ=255)
cAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGCGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGAt > 1:3400613/1‑93 (MQ=255)
aaCAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATg > 2:1258143/1‑93 (MQ=255)
aaCAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATg < 1:1183579/93‑1 (MQ=255)
aCAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATgg > 2:402946/1‑93 (MQ=255)
aCAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATgg < 2:776629/93‑1 (MQ=255)
aCAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATgg > 2:1105100/1‑93 (MQ=255)
cAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATgga > 1:3442693/1‑92 (MQ=255)
cAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGc > 2:987049/1‑93 (MQ=255)
gTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCaa > 1:1707209/1‑93 (MQ=255)
gCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCaaaa < 1:1915279/93‑1 (MQ=255)
ggATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAAtt < 1:1057244/93‑1 (MQ=255)
gATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGACAATGATTGAAGTTGTTGCCGCCATCATTGAACGAGATGGCAAAAttt > 2:3206196/1‑93 (MQ=255)
atatTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAAtttt < 2:4569039/93‑1 (MQ=255)
atatTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAAtttt < 1:3779963/93‑1 (MQ=255)
tattatGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTTTa > 1:3284296/1‑93 (MQ=255)
tattatGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTTTa > 1:2286150/1‑93 (MQ=255)
ttatGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTTTACt > 2:3014819/1‑93 (MQ=255)
ttatGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTTTACt < 2:4618696/93‑1 (MQ=255)
ttatGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTTTACt > 1:2268930/1‑93 (MQ=255)
tatGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTTTACTc < 2:3330400/93‑1 (MQ=255)
atGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTTTACTcg < 2:2986005/93‑1 (MQ=255)
tGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTTTACTcgc < 2:3120629/93‑1 (MQ=255)
tGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTTTACTcgc < 1:519135/93‑1 (MQ=255)
|
GTTTAATCCGGGGATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCATTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTTTACTCGC > NC_000913/1839394‑1839572
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACGGTTTAATCCGGGGATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCATTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTTTACTCGCGCAAC > NC_000913/1839391‑1839577
|
ACGGTTTAATCCGGGGATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCG < SRR4302544.4374526/94‑1 (MQ=60)
CGGTTTAATCCGGGGATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGT < SRR4302544.3024415/94‑1 (MQ=60)
CGGTTTAATCCGGGGATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGT > SRR4302544.2438349/1‑94 (MQ=60)
GGTTTAATCCGGGGATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTT > SRR4302544.1733796/1‑94 (MQ=60)
TTTAATCCGGGGATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTT < SRR4302544.2790614/94‑1 (MQ=60)
AATCCGGGGATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCG < SRR4302544.953833/94‑1 (MQ=60)
AATCCGGGGATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCG < SRR4302544.2130955/94‑1 (MQ=60)
ATCCGGGGATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGC > SRR4302544.2307250/1‑94 (MQ=60)
CCGGGGATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTT > SRR4302544.3420801/1‑94 (MQ=60)
CCGGGGATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTT > SRR4302544.3901115/1‑94 (MQ=60)
GGGGATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTAT < SRR4302544.1014002/94‑1 (MQ=60)
GGGGATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTAT < SRR4302544.1882745/94‑1 (MQ=60)
GGGATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATC > SRR4302544.2085232/1‑94 (MQ=60)
GGGATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATC < SRR4302544.1965874/94‑1 (MQ=60)
GATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTG < SRR4302544.1553505/94‑1 (MQ=60)
GATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTG < SRR4302544.3595775/94‑1 (MQ=60)
ATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGC > SRR4302544.3101745/1‑94 (MQ=60)
AAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCG < SRR4302544.2810781/94‑1 (MQ=60)
AGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGT > SRR4302544.3475582/1‑94 (MQ=60)
GATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTG < SRR4302544.3321186/94‑1 (MQ=60)
GATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTG < SRR4302544.3768411/94‑1 (MQ=60)
GATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTG < SRR4302544.4069703/94‑1 (MQ=60)
ATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGT < SRR4302544.2041425/94‑1 (MQ=60)
ATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGT > SRR4302544.3806654/1‑94 (MQ=60)
CGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAA > SRR4302544.425296/1‑94 (MQ=60)
CGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAA > SRR4302544.1442167/1‑94 (MQ=60)
CGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGAGTGTAA > SRR4302544.1552079/1‑94 (MQ=60)
GGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAAT < SRR4302544.2534436/94‑1 (MQ=60)
GGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAAT < SRR4302544.3495398/94‑1 (MQ=60)
GGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAAT > SRR4302544.134396/1‑94 (MQ=60)
GTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATT > SRR4302544.605031/1‑94 (MQ=60)
TCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTT > SRR4302544.4187745/1‑94 (MQ=60)
TCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTT < SRR4302544.1833973/94‑1 (MQ=60)
CTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTACTTTA > SRR4302544.2702227/1‑94 (MQ=60)
TAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTAT > SRR4302544.3909327/1‑94 (MQ=60)
GCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGA < SRR4302544.4529972/94‑1 (MQ=60)
GCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGA > SRR4302544.2836609/1‑94 (MQ=60)
ACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAA > SRR4302544.887476/1‑94 (MQ=60)
ACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAA < SRR4302544.212366/94‑1 (MQ=60)
CAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAA < SRR4302544.3191874/94‑1 (MQ=60)
AGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAAT > SRR4302544.3813005/1‑94 (MQ=60)
AGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAAT > SRR4302544.616440/1‑94 (MQ=60)
GGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATG > SRR4302544.2416992/1‑94 (MQ=60)
GGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATG < SRR4302544.3617230/94‑1 (MQ=60)
CACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGAT > SRR4302544.132031/1‑94 (MQ=60)
CCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAA > SRR4302544.2428003/1‑94 (MQ=60)
CTTAAATATAAAGCGTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAG < SRR4302544.4777419/94‑1 (MQ=60)
CTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAG > SRR4302544.1201742/1‑94 (MQ=60)
CTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAG > SRR4302544.1418788/1‑94 (MQ=60)
CTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAG < SRR4302544.4777418/94‑1 (MQ=60)
TAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTT > SRR4302544.3898156/1‑94 (MQ=60)
TAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTT < SRR4302544.2205688/94‑1 (MQ=60)
TAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTT < SRR4302544.1837748/94‑1 (MQ=60)
AAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTG > SRR4302544.1432697/1‑94 (MQ=60)
AATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGT < SRR4302544.1129660/94‑1 (MQ=60)
ATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTT < SRR4302544.975936/94‑1 (MQ=60)
TATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTG < SRR4302544.4493597/94‑1 (MQ=60)
ATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGC > SRR4302544.4753395/1‑94 (MQ=60)
ATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGC > SRR4302544.4540216/1‑94 (MQ=60)
ATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGC > SRR4302544.4753394/1‑94 (MQ=60)
ATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCATTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGC > SRR4302544.4786088/1‑94 (MQ=60)
TAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCC > SRR4302544.3968077/1‑94 (MQ=60)
AAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCG > SRR4302544.1941364/1‑94 (MQ=60)
CCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCAT > SRR4302544.2163707/1‑94 (MQ=60)
CCTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCAT > SRR4302544.3563859/1‑94 (MQ=60)
CTTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATC > SRR4302544.2325952/1‑94 (MQ=60)
TTTCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCA < SRR4302544.1184779/94‑1 (MQ=60)
TCTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATT < SRR4302544.1845790/94‑1 (MQ=60)
CTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTG < SRR4302544.2910274/94‑1 (MQ=60)
CTGATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTG < SRR4302544.4220875/94‑1 (MQ=60)
GATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAA < SRR4302544.2530469/94‑1 (MQ=60)
GATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAA < SRR4302544.1779042/94‑1 (MQ=60)
ATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAAC < SRR4302544.2904181/94‑1 (MQ=60)
ATTGAGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAAC > SRR4302544.2941381/1‑94 (MQ=60)
TTGAGCAACAGTGCGGATATTATGGCTTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACG < SRR4302544.503274/94‑1 (MQ=60)
AGCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGA > SRR4302544.3320353/1‑94 (MQ=60)
GCAACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGCGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGAT > SRR4302544.3433130/1‑94 (MQ=60)
AACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGG < SRR4302544.1195349/94‑1 (MQ=60)
ACAGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGA > SRR4302544.3475596/1‑94 (MQ=60)
AGTGCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAA > SRR4302544.1724032/1‑94 (MQ=60)
GCGGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAAT < SRR4302544.1933787/94‑1 (MQ=60)
GGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTT < SRR4302544.1067738/94‑1 (MQ=60)
GGATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTT > SRR4302544.3173455/1‑94 (MQ=60)
ATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTTTA < SRR4302544.3817403/94‑1 (MQ=60)
ATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTTTA > SRR4302544.2307699/1‑94 (MQ=60)
ATATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTTTA > SRR4302544.3315590/1‑94 (MQ=60)
ATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTTTACT < SRR4302544.3730098/94‑1 (MQ=60)
ATTATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTTTACT > SRR4302544.2290279/1‑94 (MQ=60)
TTATGGCGGTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTTTACTC < SRR4302544.42053/94‑1 (MQ=60)
ATGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTTTACTCGC > SRR4302544.3254453/1‑94 (MQ=60)
TGGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTTTACTCGCG < SRR4302544.524260/94‑1 (MQ=60)
GGCGTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTTTACTCGCGC > SRR4302544.1850735/1‑94 (MQ=60)
GTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTTTACTCGCGCAAC > SRR4302544.3122161/1‑94 (MQ=60)
GTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTTTACTCGCGCAAC < SRR4302544.1828023/94‑1 (MQ=60)
GTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTTTACTCGCGCAAC < SRR4302544.4673114/94‑1 (MQ=60)
GTTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTTTACTCGCGCAAC < SRR4302544.91967/94‑1 (MQ=60)
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ACGGTTTAATCCGGGGATGAAGATGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCATTTTTCGCTTATCTGCCCGTGTGTAATTTATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTTTACTCGCGCAAC > NC_000913/1839391‑1839577
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
