Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,923,118 |
T→C |
intergenic (‑125/‑14) |
b1841 ← / → holE |
hypothetical protein/DNA polymerase III theta subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,923,118 | 0 | T | C | 99.5%
| 640.4
/ ‑5.1
| 195 | intergenic (‑125/‑14) | b1841/holE | hypothetical protein/DNA polymerase III theta subunit |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (78/116); total (78/117) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 |
Only 100 of 201 total aligned reads displayed.
GAGCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTG > NC_000913/1923028‑1923206
|
agCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACgag < 1:1169893/93‑1 (MQ=255)
agCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACgag > 2:1520738/1‑93 (MQ=255)
agCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACgag < 1:1943273/93‑1 (MQ=255)
aaCCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGAt > 2:748881/1‑93 (MQ=255)
aaCCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGAt < 2:1481284/93‑1 (MQ=255)
aCCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGAtt > 1:1484578/1‑93 (MQ=255)
aCCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGAtt > 1:1837447/1‑93 (MQ=255)
ccTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTa < 2:3515322/93‑1 (MQ=255)
ccTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTa > 1:968216/1‑93 (MQ=255)
cTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTaa < 2:2617268/93‑1 (MQ=255)
cTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTaa < 1:1732894/93‑1 (MQ=255)
cTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTaa > 2:4117062/1‑93 (MQ=255)
cTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACCAGGAGATTaa > 2:4615777/1‑93 (MQ=255)
ttGTCTAATGTCTGAGTCGAGGATCGTCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAg < 2:4204342/93‑1 (MQ=255)
tAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGc < 1:438210/93‑1 (MQ=255)
tAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGc > 1:2409051/1‑93 (MQ=255)
tAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGc < 2:2485643/93‑1 (MQ=255)
tAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGc < 1:2037404/93‑1 (MQ=255)
aaTGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCt < 2:2352583/93‑1 (MQ=255)
aaTGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCt > 2:1462997/1‑93 (MQ=255)
tGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTga < 1:710795/93‑1 (MQ=255)
gTCTGAGTCGAGGATCATCAATTACGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTgaa > 1:4337006/1‑93 (MQ=255)
tGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTgaagaa < 2:3454861/93‑1 (MQ=255)
tGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTgaagaa < 2:3830967/93‑1 (MQ=255)
tGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTgaagaa < 2:3711328/93‑1 (MQ=255)
tGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTgaagaa < 1:4438358/93‑1 (MQ=255)
aGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATc < 1:492772/93‑1 (MQ=255)
gTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCt < 1:2048499/93‑1 (MQ=255)
gAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGc < 1:573045/93‑1 (MQ=255)
aGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCt > 1:3574280/1‑93 (MQ=255)
aGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCt < 2:929116/93‑1 (MQ=255)
aGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCt > 2:1122448/1‑93 (MQ=255)
aGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCt > 2:2267215/1‑93 (MQ=255)
aGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCt < 2:2396874/93‑1 (MQ=255)
ggATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTa > 2:3105192/1‑93 (MQ=255)
ggATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTa > 1:3253133/1‑93 (MQ=255)
tcatcaATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAAc > 2:3667249/1‑93 (MQ=255)
tcatcaATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAAc > 2:3165412/1‑93 (MQ=255)
tcatcaATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAAc < 1:3244164/93‑1 (MQ=255)
catcaATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACt > 1:4742623/1‑93 (MQ=255)
catcaATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACt > 2:4687917/1‑93 (MQ=255)
atcaATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTg < 1:2635470/93‑1 (MQ=255)
acaATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTgg < 2:1387502/92‑1 (MQ=255)
caATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTgca > 2:4417511/1‑91 (MQ=255)
aaTTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGAt < 1:2190424/93‑1 (MQ=255)
aaTTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGAt < 2:2005344/93‑1 (MQ=255)
aTTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCGCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATc < 2:3180833/93‑1 (MQ=255)
aTTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATc > 2:4747209/1‑93 (MQ=255)
ccGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCaaa < 1:2024052/93‑1 (MQ=255)
ccGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCaaa < 1:878258/93‑1 (MQ=255)
gCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAg > 1:4592017/1‑93 (MQ=255)
ccATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAATAGAAATg < 2:4654176/93‑1 (MQ=255)
ccATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATg < 2:1811939/93‑1 (MQ=255)
ccATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATg > 1:2950516/1‑93 (MQ=255)
ccATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATg < 1:3303568/93‑1 (MQ=255)
cATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATgg < 1:3632366/93‑1 (MQ=255)
aTCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGa > 1:2157547/1‑93 (MQ=255)
tCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGCGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGAt > 2:159503/1‑93 (MQ=255)
ccTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATa < 1:3492154/93‑1 (MQ=255)
cTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATaa > 1:2706255/1‑93 (MQ=255)
ggCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAg < 1:634758/93‑1 (MQ=255)
ggCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAg > 1:1282404/1‑93 (MQ=255)
ggCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAg > 2:315514/1‑93 (MQ=255)
gCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGt < 1:211797/93‑1 (MQ=255)
gCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGt < 1:2861524/93‑1 (MQ=255)
gCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGt > 1:2824440/1‑93 (MQ=255)
gCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGt < 1:4234450/93‑1 (MQ=255)
cTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTg > 2:1055602/1‑93 (MQ=255)
tCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAgaga > 1:2262902/1‑93 (MQ=255)
cACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGaa < 1:4038633/93‑1 (MQ=255)
cACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGaa < 1:4146276/93‑1 (MQ=255)
cACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGaa < 1:390497/93‑1 (MQ=255)
cACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGaa > 1:3168896/1‑93 (MQ=255)
aCTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAAt < 2:2963948/93‑1 (MQ=255)
ctctTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATg < 2:399841/93‑1 (MQ=255)
tctTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGt < 1:1442604/93‑1 (MQ=255)
tctTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGt < 2:4260626/93‑1 (MQ=255)
ctTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTc < 2:3071938/93‑1 (MQ=255)
ctTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTc < 1:2673523/93‑1 (MQ=255)
tAGTATCTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGa < 2:4286004/93‑1 (MQ=255)
tAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGa < 1:1019907/93‑1 (MQ=255)
tAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGa < 2:219883/93‑1 (MQ=255)
tAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGa > 1:4241998/1‑93 (MQ=255)
aGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGAt < 2:4318595/93‑1 (MQ=255)
gTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGAtt < 1:3022585/93‑1 (MQ=255)
tAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGAttt < 2:36316/93‑1 (MQ=255)
aaCTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTg > 1:110019/1‑93 (MQ=255)
aCTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTgg > 2:3895641/1‑93 (MQ=255)
cTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAGACAGAAATGGATAAAGTGAATGTCGATTTggc < 1:2449701/93‑1 (MQ=255)
cTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTggc < 1:1666947/93‑1 (MQ=255)
ttttGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTggcg > 2:3346202/1‑93 (MQ=255)
ttGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTggcggc < 1:382743/93‑1 (MQ=255)
gCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTggcggcgg > 1:1178973/1‑93 (MQ=255)
ccGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGcc > 1:3211563/1‑93 (MQ=255)
cgcgAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCg < 2:837917/93‑1 (MQ=255)
gAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCgggg < 1:3419938/93‑1 (MQ=255)
aaTGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGt < 1:4359453/93‑1 (MQ=255)
aaTGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGt < 2:4054475/93‑1 (MQ=255)
atgacgAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTg > 2:3057437/1‑93 (MQ=255)
atgacgAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTg < 1:3743215/93‑1 (MQ=255)
|
GAGCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTG > NC_000913/1923028‑1923206
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACAGAGCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGCATT > NC_000913/1923025‑1923211
|
ACAGAGCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGAC < SRR4302544.4088491/94‑1 (MQ=60)
ACAGAGCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGAC > SRR4302544.1874630/1‑94 (MQ=60)
ACAGAGCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGAC > SRR4302544.806894/1‑94 (MQ=60)
GAGCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAG < SRR4302544.1135958/94‑1 (MQ=60)
GAGCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAG < SRR4302544.1457052/94‑1 (MQ=60)
AGCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGG < SRR4302544.1962080/94‑1 (MQ=60)
AGCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGG < SRR4302544.1181564/94‑1 (MQ=60)
GCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGA < SRR4302544.2059119/94‑1 (MQ=60)
ACCCTTGTCTAATGTCTGAGTCGAGAATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATT < SRR4302544.4104097/94‑1 (MQ=60)
AACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATT > SRR4302544.1499246/1‑94 (MQ=60)
AACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATT > SRR4302544.1855282/1‑94 (MQ=60)
ACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTA > SRR4302544.977711/1‑94 (MQ=60)
CTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAG < SRR4302544.2047636/94‑1 (MQ=60)
CTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAG < SRR4302544.1749883/94‑1 (MQ=60)
CTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGC > SRR4302544.2431939/1‑94 (MQ=60)
TAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCT < SRR4302544.442613/94‑1 (MQ=60)
TAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCT < SRR4302544.442611/94‑1 (MQ=60)
TAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCT < SRR4302544.2057085/94‑1 (MQ=60)
AATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTG > SRR4302544.611890/1‑94 (MQ=60)
TGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAA < SRR4302544.717842/94‑1 (MQ=60)
TGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAA > SRR4302544.4381143/1‑94 (MQ=60)
TGTCTGAGTCGAGGATCATCAATTACGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAA > SRR4302544.4381144/1‑94 (MQ=60)
CTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAA < SRR4302544.992575/94‑1 (MQ=60)
TGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAAT < SRR4302544.4483109/94‑1 (MQ=60)
GAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATC < SRR4302544.3277776/94‑1 (MQ=60)
AGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCT < SRR4302544.497620/94‑1 (MQ=60)
GTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTG > SRR4302544.1726576/1‑94 (MQ=60)
GTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTG < SRR4302544.2068233/94‑1 (MQ=60)
GTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTG < SRR4302544.3206090/94‑1 (MQ=60)
TCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGG < SRR4302544.1184525/94‑1 (MQ=60)
TCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGCAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGG > SRR4302544.202536/1‑94 (MQ=60)
GAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCT > SRR4302544.3608558/1‑94 (MQ=60)
GAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCT < SRR4302544.4629476/94‑1 (MQ=60)
GAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCT < SRR4302544.578650/94‑1 (MQ=60)
AGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTA > SRR4302544.3284246/1‑94 (MQ=60)
GGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAA > SRR4302544.3322129/1‑94 (MQ=60)
GGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAA < SRR4302544.3399147/94‑1 (MQ=60)
ATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAAC > SRR4302544.2207957/1‑94 (MQ=60)
ATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAAC > SRR4302544.4016176/1‑94 (MQ=60)
TCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACT < SRR4302544.3275221/94‑1 (MQ=60)
TCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACT > SRR4302544.4789365/1‑94 (MQ=60)
TCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACT > SRR4302544.1528011/1‑94 (MQ=60)
ATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGG < SRR4302544.2660726/94‑1 (MQ=60)
AATTCCTGCTTTCCATCCTGGCTCACTCTTAGTAACTTTTCCCCGCGAATGACGATGAGATTAAGAATGCTGAAGAATCTGGCTATACTGGATC < SRR4302544.387998/94‑1 (MQ=60)
AATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATC < SRR4302544.2211113/94‑1 (MQ=60)
CCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAAC < SRR4302544.3034061/94‑1 (MQ=60)
CCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAAC < SRR4302544.2043683/94‑1 (MQ=60)
CCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAAC < SRR4302544.886968/94‑1 (MQ=60)
CGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACA > SRR4302544.1201656/1‑94 (MQ=60)
GGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAG > SRR4302544.4637704/1‑94 (MQ=60)
TTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAA < SRR4302544.2462420/94‑1 (MQ=60)
GCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATG > SRR4302544.2978857/1‑94 (MQ=60)
CCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGG < SRR4302544.3335035/94‑1 (MQ=60)
CCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGG > SRR4302544.229508/1‑94 (MQ=60)
CCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGG < SRR4302544.326539/94‑1 (MQ=60)
CATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGA > SRR4302544.2178046/1‑94 (MQ=60)
CATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGA < SRR4302544.3668560/94‑1 (MQ=60)
CATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGA > SRR4302544.3113821/1‑94 (MQ=60)
CATCCTGGCGCACTCTTAGTAACTGTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGA < SRR4302544.3668561/94‑1 (MQ=60)
ATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGAT < SRR4302544.4256645/94‑1 (MQ=60)
CCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAA > SRR4302544.2732278/1‑94 (MQ=60)
CCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAA < SRR4302544.3525451/94‑1 (MQ=60)
CTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAA > SRR4302544.2960034/1‑94 (MQ=60)
TGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAG < SRR4302544.492196/94‑1 (MQ=60)
TGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAG > SRR4302544.1295038/1‑94 (MQ=60)
TGGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAG < SRR4302544.896180/94‑1 (MQ=60)
GGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGT > SRR4302544.2851731/1‑94 (MQ=60)
GGCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGT < SRR4302544.641012/94‑1 (MQ=60)
GCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTG < SRR4302544.4277607/94‑1 (MQ=60)
GCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTG < SRR4302544.2889143/94‑1 (MQ=60)
GCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTG < SRR4302544.213979/94‑1 (MQ=60)
GCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTG < SRR4302544.213978/94‑1 (MQ=60)
GCTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTG > SRR4302544.1300187/1‑94 (MQ=60)
CTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGA < SRR4302544.3637313/94‑1 (MQ=60)
CTCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGAGA > SRR4302544.2284186/1‑94 (MQ=60)
TCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAA > SRR4302544.3199053/1‑94 (MQ=60)
TCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAA > SRR4302544.4398135/1‑94 (MQ=60)
TCACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAA < SRR4302544.1953524/94‑1 (MQ=60)
CACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAAT < SRR4302544.394460/94‑1 (MQ=60)
CACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAAT < SRR4302544.4078851/94‑1 (MQ=60)
CACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAAT < SRR4302544.4187325/94‑1 (MQ=60)
ACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATG < SRR4302544.3925025/94‑1 (MQ=60)
ACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATG > SRR4302544.4656438/1‑94 (MQ=60)
ACTCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGCGAATG > SRR4302544.852668/1‑94 (MQ=60)
TCTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTC < SRR4302544.1456956/94‑1 (MQ=60)
CTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCG < SRR4302544.2699152/94‑1 (MQ=60)
CTTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCG < SRR4302544.2699151/94‑1 (MQ=60)
TTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGA > SRR4302544.4285238/1‑94 (MQ=60)
TTAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGA > SRR4302544.4285239/1‑94 (MQ=60)
TAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGAT < SRR4302544.178184/94‑1 (MQ=60)
TAGTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGAT < SRR4302544.1030089/94‑1 (MQ=60)
GTAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTT < SRR4302544.3051545/94‑1 (MQ=60)
TAACTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTG > SRR4302544.111026/1‑94 (MQ=60)
CTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAGACAGAAATGGATAAAGTGAATGTCGATTTGGCG < SRR4302544.2473067/94‑1 (MQ=60)
CTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCG < SRR4302544.1683362/94‑1 (MQ=60)
CTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCG > SRR4302544.2776897/1‑94 (MQ=60)
CTTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCG < SRR4302544.3519097/94‑1 (MQ=60)
TTTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGG < SRR4302544.3818553/94‑1 (MQ=60)
TTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGC < SRR4302544.2503991/94‑1 (MQ=60)
TTTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGC < SRR4302544.704854/94‑1 (MQ=60)
TTGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCG < SRR4302544.386638/94‑1 (MQ=60)
TGCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGG > SRR4302544.1190717/1‑94 (MQ=60)
GCCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGC > SRR4302544.2858484/1‑94 (MQ=60)
CCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCC > SRR4302544.3242191/1‑94 (MQ=60)
CCCGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCC > SRR4302544.4453551/1‑94 (MQ=60)
CGCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGG > SRR4302544.2719957/1‑94 (MQ=60)
GCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGG < SRR4302544.2169050/94‑1 (MQ=60)
GCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGG < SRR4302544.3553154/94‑1 (MQ=60)
GCGAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGG < SRR4302544.503810/94‑1 (MQ=60)
GAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGT < SRR4302544.2272292/94‑1 (MQ=60)
GAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGT < SRR4302544.3452638/94‑1 (MQ=60)
GAATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGT < SRR4302544.1040272/94‑1 (MQ=60)
AATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTG < SRR4302544.4403697/94‑1 (MQ=60)
ATGACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGG < SRR4302544.3780406/94‑1 (MQ=60)
GACGAGGAGATTAAGAATGCTTAAGAATCTGGCTAAACTGGATCAAACAGAGATGGGTAAAGTGtattccgttttggcggctgcccgggcggca > SRR4302544.2881030/1‑64 (MQ=60)
GACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGCA > SRR4302544.2609627/1‑94 (MQ=60)
GACGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGCCGGCCGGGGTGGCT > SRR4302544.2609628/1‑94 (MQ=60)
CGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGCATT < SRR4302544.2638176/94‑1 (MQ=60)
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ACAGAGCATAACCTTGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGCATT > NC_000913/1923025‑1923211
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
