Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,987,280 |
A→G |
R78R (CGT→CGC) |
yecH ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,987,280 | 0 | A | G | 97.6%
| 526.7
/ 0.3
| 169 | R78R (CGT→CGC) | yecH | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (1/3); new base G (69/96); total (70/99) |
| Fisher's exact test for biased strand distribution p-value = 6.43e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 |
Only 100 of 179 total aligned reads displayed.
GTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGACGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGC > NC_000913/1987191‑1987369
|
aTTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCa > 2:1441221/1‑93 (MQ=255)
tttATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCaaa > 2:1096967/1‑93 (MQ=255)
tttATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCaaa > 1:1883485/1‑93 (MQ=255)
tATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATAAGTGGCGGCAAATc > 2:2011940/1‑93 (MQ=255)
tCGACAAAGACCTCTCTACACTCGACACACAAAACTAATGCTCTCCGCCGACAGGTTTACTTCCGCTGCTTCAAATCAGTGGAGGCCAACCtt > 2:2745392/1‑93 (MQ=255)
cGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTa > 2:4682769/1‑93 (MQ=255)
cGAAAAACACCTCTGTGCCCTCGACACACAAAACTAATGCTCTGCGGCGACAGGTTTACTGTCGCCGGTTCAAATCAGTGGGGGAAAATTTTa < 2:1582431/93‑1 (MQ=255)
gACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTAc < 1:1238799/93‑1 (MQ=255)
aaGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTg < 1:2866678/93‑1 (MQ=255)
aaGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTg > 1:841554/1‑93 (MQ=255)
aaGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTg < 1:4570040/93‑1 (MQ=255)
aGACCTCTCTCCCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGa < 2:4302942/93‑1 (MQ=255)
aGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGa < 2:2282276/93‑1 (MQ=255)
aGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGa > 2:3775521/1‑93 (MQ=255)
gAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGAt < 2:3217070/93‑1 (MQ=255)
gAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGAt < 2:2964621/93‑1 (MQ=255)
aaCTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATc > 1:3870298/1‑93 (MQ=255)
aCTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCg > 2:2853499/1‑93 (MQ=255)
aCTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGACGGCAAATCTTACTCTGATCg > 1:3679916/1‑93 (MQ=255)
tctctACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGt < 2:2878040/93‑1 (MQ=255)
cctctACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGt < 2:1552783/92‑1 (MQ=255)
ctctACCCTCGGCACACAAAACTAATGCTCTCCGGCGGCAAGTTTACTGCCGCCGTTTCGAATCAGTGGCGGCGAATCTTACTCTGCTCGGTc > 2:1235808/1‑93 (MQ=255)
tctACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCg > 2:3396417/1‑93 (MQ=255)
ctACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGa < 1:3960787/93‑1 (MQ=255)
aCCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGaaa > 1:721774/1‑93 (MQ=255)
cccTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGaaaa < 2:4056150/93‑1 (MQ=255)
cccTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGaaaa > 1:3115387/1‑93 (MQ=255)
ccTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGaaaaa < 2:4471380/93‑1 (MQ=255)
ccTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGCGGCGGCAAATCTTACTCTGATCGGTCGaaaaa < 1:3242199/93‑1 (MQ=255)
cTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAc < 1:3558533/93‑1 (MQ=255)
cTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAc < 1:4616094/93‑1 (MQ=255)
cTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAc < 1:2430068/93‑1 (MQ=255)
tCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAcc > 2:3990987/1‑93 (MQ=255)
tCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAcc < 1:1564913/93‑1 (MQ=255)
cGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCg > 1:3386963/1‑93 (MQ=255)
gACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGt < 1:2831867/93‑1 (MQ=255)
gACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGt > 1:881387/1‑93 (MQ=255)
aacacaaAAACCGAATGCCCCCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGt < 1:1771866/92‑1 (MQ=255)
acacacAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTc > 2:32650/1‑93 (MQ=255)
acacacAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTc < 1:1291709/93‑1 (MQ=255)
cacacaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCt > 2:4586784/1‑93 (MQ=255)
cacacaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCt > 1:3204315/1‑93 (MQ=255)
acacaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCtt > 1:3887509/1‑93 (MQ=255)
acacaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCtt < 1:1216709/93‑1 (MQ=255)
cacaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCttt > 1:3314848/1‑93 (MQ=255)
acaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCTAAAAACCGTCTTTc < 2:3192567/93‑1 (MQ=255)
acaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTc < 1:3525579/93‑1 (MQ=255)
aaaCTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGaa < 1:984523/93‑1 (MQ=255)
aaCTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAg < 2:2335001/93‑1 (MQ=255)
aaCTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGACGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAg < 2:4008899/93‑1 (MQ=255)
aCTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAgg < 2:2288459/93‑1 (MQ=255)
cTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGt < 2:4670078/93‑1 (MQ=255)
cTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGt < 2:3516668/93‑1 (MQ=255)
tAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGta > 2:523623/1‑93 (MQ=255)
agtGCTCTCGGGCGGCAGGTTTCCTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGtat < 2:17237/91‑1 (MQ=255)
aaTGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGtat < 1:4713433/93‑1 (MQ=255)
aTGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGtata > 2:3087779/1‑93 (MQ=255)
cctcCGGCGGCGGGTTTACTGCCGCCGGTTCAAATCAGTGACGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAAtt < 1:4106702/92‑1 (MQ=255)
ctcCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTTGAAGGTATAAAttt > 2:3291181/1‑93 (MQ=255)
ctcCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAAttt < 2:2643606/93‑1 (MQ=255)
cggcggCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGcc < 2:1404186/93‑1 (MQ=255)
ggcggcAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCt < 1:2853765/93‑1 (MQ=255)
gcgtcAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCtt < 2:656006/93‑1 (MQ=255)
gcggcAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCtt < 2:1643205/93‑1 (MQ=255)
gcAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtg < 2:3019402/93‑1 (MQ=255)
gcAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtg > 2:3186462/1‑93 (MQ=255)
cAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgc < 1:3044414/93‑1 (MQ=255)
cAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgc < 1:420719/93‑1 (MQ=255)
aGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgct < 2:601428/93‑1 (MQ=255)
aGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgct < 2:1317479/93‑1 (MQ=255)
gTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgctgc > 1:2551951/1‑93 (MQ=255)
tttACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGcc < 1:1089403/93‑1 (MQ=255)
ttACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCa > 2:2480233/1‑93 (MQ=255)
tGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGaaa < 2:2141963/93‑1 (MQ=255)
tGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGaaa < 1:3654417/93‑1 (MQ=255)
cgccgccGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGaaa < 2:1409256/92‑1 (MQ=255)
ccgccgTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACg < 1:666749/93‑1 (MQ=255)
ccgccgTGTCAAATCAGTTGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACg < 1:2655505/93‑1 (MQ=255)
cgccgTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGc > 1:3775105/1‑93 (MQ=255)
gccgTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCt < 2:4387251/93‑1 (MQ=255)
ccgTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTa > 2:990822/1‑93 (MQ=255)
ccgTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTa < 1:1497768/93‑1 (MQ=255)
ccgTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTa < 2:1999464/93‑1 (MQ=255)
cgTTTCAAATCAGTGGCGTCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTAc < 1:1848123/93‑1 (MQ=255)
cgTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTAc < 1:2158643/93‑1 (MQ=255)
gTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTAcc > 1:2358624/1‑93 (MQ=255)
ttCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAg > 1:3399468/1‑93 (MQ=255)
tCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGc < 2:3350371/93‑1 (MQ=255)
tCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGc < 2:950441/93‑1 (MQ=255)
cAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGct < 2:3891507/93‑1 (MQ=255)
aaaTCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGctc > 1:2294580/1‑93 (MQ=255)
aaaTCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGctc < 2:1386540/93‑1 (MQ=255)
aaaTCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGctc < 1:1927619/93‑1 (MQ=255)
aaTCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGctct > 2:1053987/1‑93 (MQ=255)
aaTCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGctct > 1:1015196/1‑93 (MQ=255)
aaTCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGctct > 2:693017/1‑93 (MQ=255)
aaTCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGctct > 1:1015044/1‑93 (MQ=255)
aTCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCtctc > 1:584502/1‑93 (MQ=255)
cAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTccc > 2:3917986/1‑93 (MQ=255)
gTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGc < 2:3632425/93‑1 (MQ=255)
|
GTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGACGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGC > NC_000913/1987191‑1987369
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGACGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGCTGTC > NC_000913/1987191‑1987373
|
GTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGC > SRR4302544.1595924/1‑94 (MQ=60)
TATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCA > SRR4302544.2861293/1‑94 (MQ=60)
TTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAA > SRR4302544.1901692/1‑94 (MQ=60)
TTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAAT < SRR4302544.748345/94‑1 (MQ=60)
TATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCT < SRR4302544.2831304/94‑1 (MQ=60)
ATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTT < SRR4302544.2957841/94‑1 (MQ=60)
CGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTAC > SRR4302544.1096505/1‑94 (MQ=60)
GACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACT < SRR4302544.1251037/94‑1 (MQ=60)
CAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCT < SRR4302544.564132/94‑1 (MQ=60)
AAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTG > SRR4302544.849859/1‑94 (MQ=60)
AAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGA < SRR4302544.2894355/94‑1 (MQ=60)
AAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGA < SRR4302544.4615595/94‑1 (MQ=60)
GAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATC > SRR4302544.3908732/1‑94 (MQ=60)
ACCTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCG < SRR4302544.878285/94‑1 (MQ=60)
AACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGACGGCAAATCTTACTCTGATCG > SRR4302544.3716617/1‑94 (MQ=60)
CTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCG > SRR4302544.3736802/1‑94 (MQ=60)
CTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAA < SRR4302544.4000173/94‑1 (MQ=60)
TACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAA > SRR4302544.728884/1‑94 (MQ=60)
ACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAA > SRR4302544.3145017/1‑94 (MQ=60)
CCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGCGGCGGCAAATCTTACTCTGATCGGTCGAAAAAC < SRR4302544.3273234/94‑1 (MQ=60)
CTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACC < SRR4302544.4661919/94‑1 (MQ=60)
CTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACC < SRR4302544.3592640/94‑1 (MQ=60)
CTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACC < SRR4302544.2453211/94‑1 (MQ=60)
TCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCG > SRR4302544.3419331/1‑94 (MQ=60)
TCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCG < SRR4302544.1580433/94‑1 (MQ=60)
CGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGT > SRR4302544.890122/1‑94 (MQ=60)
CGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGT < SRR4302544.648916/94‑1 (MQ=60)
aacacaaaaaccgaatgccccCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTC < SRR4302544.1789205/73‑1 (MQ=60)
GACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTC < SRR4302544.2859227/94‑1 (MQ=60)
ACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCT < SRR4302544.3840285/94‑1 (MQ=60)
ACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCT > SRR4302544.4152669/1‑94 (MQ=60)
ACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCT < SRR4302544.1304422/94‑1 (MQ=60)
ACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCT > SRR4302544.1238009/1‑94 (MQ=60)
ACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCT > SRR4302544.3234868/1‑94 (MQ=60)
CACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTT > SRR4302544.3926124/1‑94 (MQ=60)
ACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTT > SRR4302544.3346413/1‑94 (MQ=60)
ACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTT < SRR4302544.1228749/94‑1 (MQ=60)
ACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCG < SRR4302544.3559268/94‑1 (MQ=60)
ACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCG < SRR4302544.1534380/94‑1 (MQ=60)
AAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAG < SRR4302544.994175/94‑1 (MQ=60)
AACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGG < SRR4302544.1171556/94‑1 (MQ=60)
AATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATA > SRR4302544.3103636/1‑94 (MQ=60)
AATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATA < SRR4302544.4759996/94‑1 (MQ=60)
AGGCTCCCCGGGGGCAGGTTTACCGCCGCCGGTTCAAATCAGGGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAA < SRR4302544.3372642/94‑1 (MQ=60)
CCTCCGGCGGCGGGTTTACTGCCGCCGGTTCAAATCAGTGACGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTT < SRR4302544.4147539/94‑1 (MQ=60)
CGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCT < SRR4302544.3296701/94‑1 (MQ=60)
GGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTT < SRR4302544.2881333/94‑1 (MQ=60)
GCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTT < SRR4302544.3640820/94‑1 (MQ=60)
gtGCAGGGTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTT < SRR4302544.4064652/92‑1 (MQ=60)
CGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTT < SRR4302544.2000082/94‑1 (MQ=60)
CAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCT < SRR4302544.425020/94‑1 (MQ=60)
CAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCT < SRR4302544.3073529/94‑1 (MQ=60)
GGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGC > SRR4302544.2576448/1‑94 (MQ=60)
GTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCC < SRR4302544.3935559/94‑1 (MQ=60)
TTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCA < SRR4302544.1100236/94‑1 (MQ=60)
CTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAA < SRR4302544.2187923/94‑1 (MQ=60)
TGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTGCTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAAC < SRR4302544.3690883/94‑1 (MQ=60)
TGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAAC < SRR4302544.3690882/94‑1 (MQ=60)
GCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACG < SRR4302544.4739678/94‑1 (MQ=60)
CCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGC < SRR4302544.673330/94‑1 (MQ=60)
CCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGC > SRR4302544.2506830/1‑94 (MQ=60)
CCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGC > SRR4302544.3812519/1‑94 (MQ=60)
CCGCCGTGTCAAATCAGTTGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGC < SRR4302544.2680970/94‑1 (MQ=60)
CGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCT < SRR4302544.2342668/94‑1 (MQ=60)
CCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTAC > SRR4302544.4323086/1‑94 (MQ=60)
CCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTAC < SRR4302544.1512575/94‑1 (MQ=60)
CCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTAC > SRR4302544.3167600/1‑94 (MQ=60)
CGTTTCAAATCAGTGGCGTCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACC < SRR4302544.1866015/94‑1 (MQ=60)
CGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACC < SRR4302544.1865894/94‑1 (MQ=60)
CGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACC < SRR4302544.2179154/94‑1 (MQ=60)
CGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACC > SRR4302544.2380958/1‑94 (MQ=60)
CGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACC > SRR4302544.2596039/1‑94 (MQ=60)
TTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAG > SRR4302544.3431970/1‑94 (MQ=60)
TTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAG > SRR4302544.3431969/1‑94 (MQ=60)
TTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAG < SRR4302544.948345/94‑1 (MQ=60)
CAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTC > SRR4302544.2316210/1‑94 (MQ=60)
AAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCT < SRR4302544.1946271/94‑1 (MQ=60)
AAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCT < SRR4302544.1946272/94‑1 (MQ=60)
AAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCT > SRR4302544.1025321/1‑94 (MQ=60)
AAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCT > SRR4302544.1025168/1‑94 (MQ=60)
AATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTC > SRR4302544.590233/1‑94 (MQ=60)
TCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCC > SRR4302544.3506218/1‑94 (MQ=60)
AGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGC > SRR4302544.1430917/1‑94 (MQ=60)
TGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGCTG > SRR4302544.3282449/1‑94 (MQ=60)
GCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGCTGTC < SRR4302544.1176802/94‑1 (MQ=60)
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GTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGACGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGCTGTC > NC_000913/1987191‑1987373
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
