Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,987,280 |
A→G |
R78R (CGT→CGC) |
yecH ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,987,280 | 0 | A | G | 100.0%
| 721.3
/ NA
| 220 | R78R (CGT→CGC) | yecH | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (87/133); total (87/133) |
Only 100 of 226 total aligned reads displayed.
TGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGACGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGC > NC_000913/1987190‑1987369
|
tGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCg > 1:6490619/1‑93 (MQ=255)
tATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTggcggc > 2:2256091/1‑93 (MQ=255)
tATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTggcggc > 2:681613/1‑93 (MQ=255)
aTTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCa > 1:5197317/1‑93 (MQ=255)
aTTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCa > 1:2444619/1‑93 (MQ=255)
tttATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCaaa > 2:4346142/1‑93 (MQ=255)
aTCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCt < 1:6643431/93‑1 (MQ=255)
tCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCCGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCCAATcct > 1:1208015/1‑91 (MQ=255)
cGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTa < 2:1840987/93‑1 (MQ=255)
gACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTAc < 2:767724/93‑1 (MQ=255)
gACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTAc > 2:3758988/1‑93 (MQ=255)
aaaaGACCTCTCTCCCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTActc < 1:3419600/92‑1 (MQ=255)
aaaGAACTCTCTCCCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTActct < 1:286338/93‑1 (MQ=255)
aaaGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTActct > 1:6101294/1‑93 (MQ=255)
aaaGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTActct < 1:578655/93‑1 (MQ=255)
aaaGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTActct > 2:588736/1‑93 (MQ=255)
aGACCTCTCTCCCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGa < 1:6585015/93‑1 (MQ=255)
gAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGAt < 2:4135313/93‑1 (MQ=255)
gAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGAt < 2:6435724/93‑1 (MQ=255)
gAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGAt < 1:1735729/93‑1 (MQ=255)
aaCTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATc > 2:4466683/1‑93 (MQ=255)
aaCTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATc < 1:409466/93‑1 (MQ=255)
aCTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCg > 2:389500/1‑93 (MQ=255)
ctccctccCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCgg < 1:4848723/93‑1 (MQ=255)
tctctACCCTCGACACACAAAGCTAATGCTCTCCGGCGGCAGGTTTACTGCCGACGCTTCAAATCAGTGGCGGCAAATCTTACTCTGATCggc > 1:2826525/1‑92 (MQ=255)
tctctACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGt < 2:1625173/93‑1 (MQ=255)
tctctACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGt > 1:5088129/1‑93 (MQ=255)
ctctACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTc > 1:147918/1‑93 (MQ=255)
tctACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCg > 2:5167094/1‑93 (MQ=255)
tctACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCg > 1:2073235/1‑93 (MQ=255)
ctACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGa > 1:2999431/1‑93 (MQ=255)
aCCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGaaa > 1:3601425/1‑93 (MQ=255)
aCCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGaaa < 2:1532334/93‑1 (MQ=255)
cccTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTGTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGaaaa > 2:3519031/1‑93 (MQ=255)
ccTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGaaaaa < 2:562353/93‑1 (MQ=255)
cTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAc > 1:4705448/1‑93 (MQ=255)
cTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAc < 1:3188321/93‑1 (MQ=255)
cTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAc < 2:914404/93‑1 (MQ=255)
cTCGACACACAAAACTAATCCCCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAc < 1:1336404/93‑1 (MQ=255)
tCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAcc < 1:3926342/93‑1 (MQ=255)
cGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCg < 1:1128326/93‑1 (MQ=255)
gACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGt > 2:846432/1‑93 (MQ=255)
acacacAAAACTAATGCTCTCCGGCGGCAGTTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTc < 2:116992/93‑1 (MQ=255)
cacacaAACCTAATGCCCCCCGGCGGCAGTTTTCCTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCt < 2:3443239/93‑1 (MQ=255)
cacacaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCt < 1:6258582/93‑1 (MQ=255)
cacacaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCt > 1:1659357/1‑93 (MQ=255)
cacacaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCt < 2:4105692/93‑1 (MQ=255)
acacaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCtt > 2:6578120/1‑93 (MQ=255)
cacaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCttt < 2:2135960/93‑1 (MQ=255)
acaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTc < 1:1147741/93‑1 (MQ=255)
acaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTc > 2:5003620/1‑93 (MQ=255)
acaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTc < 1:3334724/93‑1 (MQ=255)
acaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTc > 2:2335014/1‑93 (MQ=255)
caAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCg < 2:6521710/93‑1 (MQ=255)
aaCTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAg < 2:3266260/93‑1 (MQ=255)
aaCTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAg > 2:2328502/1‑93 (MQ=255)
aaCTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAg < 2:5511300/93‑1 (MQ=255)
aaCTAATGCCCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAg < 2:6087907/93‑1 (MQ=255)
cTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGt < 2:1902142/93‑1 (MQ=255)
tAAGGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGta < 1:1264142/93‑1 (MQ=255)
accactcCGGCGGGGGGTTAACTGCCGCAGTTTCAAATCAGTGGCGGCAAATATTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATaa < 1:3756260/89‑1 (MQ=255)
tctctCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATaaa < 1:4291009/92‑1 (MQ=255)
gCTCCCGGGCGGCGGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATaaa < 1:3448421/93‑1 (MQ=255)
ctctCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAAt < 2:5355940/93‑1 (MQ=255)
tctcCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAAtt > 1:2142513/1‑93 (MQ=255)
cggcggCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGcc < 2:5218286/93‑1 (MQ=255)
ggcggcAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCt < 1:2950893/93‑1 (MQ=255)
ggcggcAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCt < 2:6242093/93‑1 (MQ=255)
cggcATGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCttt < 2:4624715/93‑1 (MQ=255)
cggcAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCttt < 2:6645726/93‑1 (MQ=255)
cgacAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCttt < 1:5043621/90‑1 (MQ=255)
gccAGTTTTATTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCtttt < 1:5688517/91‑1 (MQ=255)
gcAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtg > 2:2042216/1‑93 (MQ=255)
gcAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtg > 2:5525297/1‑93 (MQ=255)
cAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgc < 2:5702009/93‑1 (MQ=255)
aGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgct < 1:4185441/93‑1 (MQ=255)
ggTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGTCTTTtgctg > 1:5517817/1‑93 (MQ=255)
ggTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgctg < 2:4772090/93‑1 (MQ=255)
tttACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGcc < 2:4007542/93‑1 (MQ=255)
tttACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGcc < 1:5460150/93‑1 (MQ=255)
ttACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCa > 2:5993125/1‑93 (MQ=255)
ttACGGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGAGCGGTCGAAAAACCGTCCTACGAAGGTATAAATTTGCCTTTTGCTGCCa > 1:6733486/1‑93 (MQ=255)
tACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAg > 1:854529/1‑93 (MQ=255)
gccgccGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAAc < 2:617633/93‑1 (MQ=255)
cgccgTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGc < 1:5939023/93‑1 (MQ=255)
gccgTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCt < 1:2222518/93‑1 (MQ=255)
cacgTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCt < 1:2555561/91‑1 (MQ=255)
cgTTTGAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTAc < 1:3094479/93‑1 (MQ=255)
cgTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTAc > 2:2585596/1‑93 (MQ=255)
cgTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTAc < 1:3887589/93‑1 (MQ=255)
tttCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCa > 1:4262961/1‑93 (MQ=255)
cAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGct > 2:3776395/1‑93 (MQ=255)
aaaTCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGctc > 1:5976593/1‑93 (MQ=255)
aaaTCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGctc < 1:743663/93‑1 (MQ=255)
aaTCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGctct < 2:3673672/93‑1 (MQ=255)
aTCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCtctc < 1:5586809/93‑1 (MQ=255)
aTCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCtctc > 2:1689038/1‑93 (MQ=255)
aGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCg > 2:4481396/1‑93 (MQ=255)
gTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGc < 2:4230914/93‑1 (MQ=255)
gTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGc > 2:2887452/1‑93 (MQ=255)
|
TGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGACGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGC > NC_000913/1987190‑1987369
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTCTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGACGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGCTGT > NC_000913/1987187‑1987372
|
GTCTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGG > SRR4302536.6209381/1‑94 (MQ=60)
GTCTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGG > SRR4302536.3980952/1‑94 (MQ=60)
TCTGTATTTTATCGACAAAGACCTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGC < SRR4302536.1727397/94‑1 (MQ=60)
TCTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGC < SRR4302536.5435910/94‑1 (MQ=60)
CTGTATTTTATCGACAAAGATCTCTCTACCCTCAACACACAAAACTAATGCTCACCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCG < SRR4302536.6329239/94‑1 (MQ=60)
CTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCG < SRR4302536.2182023/94‑1 (MQ=60)
CTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCG > SRR4302536.6684148/1‑94 (MQ=60)
CTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCG < SRR4302536.4226941/94‑1 (MQ=60)
TGTATTTTATGGACAAAGATCTCTCTCCCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGG < SRR4302536.6288443/94‑1 (MQ=60)
GTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGC > SRR4302536.3446052/1‑94 (MQ=60)
TATTTTATCGACAAAGACCTCTCTCCCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCA < SRR4302536.2603398/94‑1 (MQ=60)
TATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCA > SRR4302536.2518493/1‑94 (MQ=60)
TATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCA > SRR4302536.5352266/1‑94 (MQ=60)
ATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAA > SRR4302536.1271367/1‑94 (MQ=60)
ATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAA > SRR4302536.6919635/1‑94 (MQ=60)
TTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATC < SRR4302536.3052453/94‑1 (MQ=60)
TATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCT > SRR4302536.3571975/1‑94 (MQ=60)
ATCGACAAAGAACTCTCTCCCCTCGACACACAAACCTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTT < SRR4302536.4320719/94‑1 (MQ=60)
ATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCACATCAGTGGCGGCAAATCTT > SRR4302536.5608107/1‑94 (MQ=60)
ATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTT < SRR4302536.6840962/94‑1 (MQ=60)
ATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCCGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCCAATCCT > SRR4302536.1244311/1‑94 (MQ=60)
CGAAAAAGACCTCTCTCCCCCCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTAC < SRR4302536.1403533/94‑1 (MQ=60)
ACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGCCAAATCTTACTT > SRR4302536.5771619/1‑94 (MQ=60)
CAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCT < SRR4302536.1795444/94‑1 (MQ=60)
CAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCT > SRR4302536.6283201/1‑94 (MQ=60)
AAAAGACCTCTCTCCCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCT < SRR4302536.3521377/94‑1 (MQ=60)
AAAAGAACTCCCTCCCCTCGACACAAAAACCTAATGCTCCCCGGGGCCGGTTTTCCTCCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCT < SRR4302536.3561135/94‑1 (MQ=21)
AAAGAACTCTCTCCCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTG < SRR4302536.293953/94‑1 (MQ=60)
AAAGAACTCTCTCCCCTCGACACAAAAAACTAATGCTCCCCGGCGGCAGTTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTG < SRR4302536.5910643/94‑1 (MQ=60)
AAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTG < SRR4302536.593339/94‑1 (MQ=60)
AGACCTCTCTCCCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGAT < SRR4302536.4941778/94‑1 (MQ=60)
AGACCTCTCTCCCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGAT < SRR4302536.6780932/94‑1 (MQ=60)
AGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGAT < SRR4302536.929503/94‑1 (MQ=60)
GACCTCTCTACCCCCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATC < SRR4302536.439474/94‑1 (MQ=60)
GAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATC < SRR4302536.1785790/94‑1 (MQ=60)
AACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCG < SRR4302536.420262/94‑1 (MQ=60)
CTCTCTCCCCTCGACACACAAAACTAATGCTCTCGGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGT < SRR4302536.2522452/94‑1 (MQ=60)
CTCTCTACCCTCGACACACAAAGCTAATGCTCTCCGGCGGCAGGTTTACTGCCGACGCTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGC > SRR4302536.2910197/1‑94 (MQ=60)
CTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGT > SRR4302536.5240331/1‑94 (MQ=60)
CTCCCTCCCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGT < SRR4302536.4994627/94‑1 (MQ=60)
TCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTC > SRR4302536.151767/1‑94 (MQ=60)
TCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTC < SRR4302536.5653606/94‑1 (MQ=60)
TCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTC < SRR4302536.550677/94‑1 (MQ=60)
CTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCG > SRR4302536.2135683/1‑94 (MQ=60)
CTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCG < SRR4302536.6284216/94‑1 (MQ=60)
CTATACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCG > SRR4302536.4461474/1‑94 (MQ=60)
TCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGA > SRR4302536.3087615/1‑94 (MQ=60)
TACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAA > SRR4302536.3709127/1‑94 (MQ=60)
CCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAA > SRR4302536.1349275/1‑94 (MQ=60)
CCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAC > SRR4302536.3109374/1‑94 (MQ=60)
CCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAC > SRR4302536.2181585/1‑94 (MQ=60)
CCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAC > SRR4302536.4846948/1‑94 (MQ=60)
CCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAC > SRR4302536.3989879/1‑94 (MQ=60)
CTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACC < SRR4302536.3281797/94‑1 (MQ=60)
CTCGACACACAAAACTAATCCCCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACC < SRR4302536.1376277/94‑1 (MQ=60)
TCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCG < SRR4302536.4043010/94‑1 (MQ=60)
TCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCG < SRR4302536.3203504/94‑1 (MQ=60)
CGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGT < SRR4302536.1162242/94‑1 (MQ=60)
ACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCT > SRR4302536.1707532/1‑94 (MQ=60)
ACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCT < SRR4302536.1769254/94‑1 (MQ=60)
ACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCT > SRR4302536.1391541/1‑94 (MQ=60)
CACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAGATCTTACTCTGATCGGTCGAAAAACCGTCTT > SRR4302536.4308442/1‑94 (MQ=60)
CACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTT < SRR4302536.6445036/94‑1 (MQ=60)
CACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTT < SRR4302536.6091604/94‑1 (MQ=60)
ccaaaaaacaaacccccccgggcggagGGTTTCCTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTT < SRR4302536.4682995/67‑1 (MQ=60)
ACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTT < SRR4302536.3810669/94‑1 (MQ=60)
ACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCG < SRR4302536.1182250/94‑1 (MQ=60)
ACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCG < SRR4302536.3433472/94‑1 (MQ=60)
ACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCG > SRR4302536.3338051/1‑94 (MQ=60)
AAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAA < SRR4302536.3443666/94‑1 (MQ=60)
AAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAG < SRR4302536.3024603/94‑1 (MQ=60)
AACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGG < SRR4302536.2920331/94‑1 (MQ=60)
aaattggctcccaggcggcgggttggccgcatCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGT < SRR4302536.2398812/62‑1 (MQ=60)
TAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTAT < SRR4302536.6540984/94‑1 (MQ=60)
TAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTAT < SRR4302536.6275425/94‑1 (MQ=60)
TAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTAT < SRR4302536.963035/94‑1 (MQ=60)
TAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTAT > SRR4302536.1564352/1‑94 (MQ=60)
TAAGGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTAT < SRR4302536.1302042/94‑1 (MQ=60)
aatgtcccgCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATA < SRR4302536.4905208/85‑1 (MQ=60)
AATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGccacttatcattcaacaaggcaggccaggcc < SRR4302536.656329/94‑32 (MQ=60)
accaCTCCGGCGGGGGGTTAACTGCCGCAGTTTCAAATCAGTGGCGGCAAATATTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAA < SRR4302536.3868473/90‑1 (MQ=60)
TCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAAT < SRR4302536.4419256/94‑1 (MQ=60)
GCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAAT < SRR4302536.1969592/94‑1 (MQ=60)
GCTCCCGGGCGGCGGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAAT < SRR4302536.3551124/94‑1 (MQ=60)
CTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATT > SRR4302536.2206821/1‑94 (MQ=60)
TCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTT > SRR4302536.1336292/1‑94 (MQ=60)
TCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTT > SRR4302536.688569/1‑94 (MQ=60)
CTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTG > SRR4302536.6136495/1‑94 (MQ=60)
CCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCC > SRR4302536.1177413/1‑94 (MQ=60)
CCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCC < SRR4302536.4274624/94‑1 (MQ=60)
GGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTT < SRR4302536.3037870/94‑1 (MQ=60)
CGACAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTT < SRR4302536.5194766/94‑1 (MQ=60)
GCCAGTTTTATTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTG < SRR4302536.5857664/94‑1 (MQ=60)
CAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCT < SRR4302536.6809399/94‑1 (MQ=60)
CAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCT < SRR4302536.768510/94‑1 (MQ=60)
CAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCT > SRR4302536.3527876/1‑94 (MQ=60)
CAGGTTTACTCCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCT > SRR4302536.2270699/1‑94 (MQ=60)
AGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAGTCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTG < SRR4302536.5230012/94‑1 (MQ=60)
AGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGTCTTTTGCTG > SRR4302536.5682372/1‑94 (MQ=60)
AGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTG < SRR4302536.673230/94‑1 (MQ=60)
AGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTG < SRR4302536.4309803/94‑1 (MQ=60)
GGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGC > SRR4302536.5340539/1‑94 (MQ=60)
GGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGC < SRR4302536.3073086/94‑1 (MQ=60)
GTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCC > SRR4302536.2464326/1‑94 (MQ=60)
GTTTACTCCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCC < SRR4302536.5879084/94‑1 (MQ=60)
TTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCA < SRR4302536.5623374/94‑1 (MQ=60)
GTTACGGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGAGCGGTCGAAAAACCGTCCTACGAAGGTATAAATTTGCCTTTTGCTGCCA > SRR4302536.6933773/1‑94 (MQ=60)
TTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAG > SRR4302536.879656/1‑94 (MQ=60)
CTGCCGCAGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAA > SRR4302536.28158/1‑94 (MQ=60)
TGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAAC < SRR4302536.3969703/94‑1 (MQ=60)
CCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACG < SRR4302536.1225353/94‑1 (MQ=60)
CGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCT < SRR4302536.6115953/94‑1 (MQ=60)
CGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCT < SRR4302536.5087949/94‑1 (MQ=60)
caCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTA < SRR4302536.2632489/92‑1 (MQ=60)
GCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTA < SRR4302536.2289746/94‑1 (MQ=60)
CGTTTGAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACC < SRR4302536.3184902/94‑1 (MQ=60)
CGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACC < SRR4302536.4003196/94‑1 (MQ=60)
GTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCA > SRR4302536.4390015/1‑94 (MQ=60)
GTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCA < SRR4302536.4024292/94‑1 (MQ=60)
TTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAG < SRR4302536.5694042/94‑1 (MQ=60)
CAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTC > SRR4302536.6154791/1‑94 (MQ=60)
AAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCT < SRR4302536.765493/94‑1 (MQ=60)
AAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCT > SRR4302536.4878759/1‑94 (MQ=60)
ATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCC < SRR4302536.5752994/94‑1 (MQ=60)
ATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCC > SRR4302536.716912/1‑94 (MQ=60)
ATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCC < SRR4302536.4063279/94‑1 (MQ=60)
ATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCC > SRR4302536.2582323/1‑94 (MQ=60)
TGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGCTG < SRR4302536.3477343/94‑1 (MQ=60)
GGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGCTGT > SRR4302536.6611598/1‑94 (MQ=60)
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GTCTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGACGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGCTGT > NC_000913/1987187‑1987372
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
