Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,998,039 |
A→G |
Y124H (TAC→CAC) |
fliY ← |
putative periplasmic binding transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,998,039 | 0 | A | G | 97.9%
| 446.3
/ ‑1.1
| 144 | Y124H (TAC→CAC) | fliY | putative periplasmic binding transport protein |
| Reads supporting (aligned to +/- strand): ref base A (2/1); new base G (72/69); total (74/70) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.58e-01 |
Only 100 of 146 total aligned reads displayed.
CCCACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTACGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGAC > NC_000913/1997951‑1998127
|
cccACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCggg > 1:3667882/1‑93 (MQ=255)
ccctttttttGCATGTCAGATTATCCGGGCTTTTAATGGTCCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCgggg < 2:3825967/89‑1 (MQ=255)
cACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGt > 1:3625394/1‑93 (MQ=255)
cACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGt < 2:3633652/93‑1 (MQ=255)
cACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGt < 2:3222930/93‑1 (MQ=255)
ccTTTTTGGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATGCCAGAAATGGTGTGCGGGGtt < 1:2637283/92‑1 (MQ=255)
aCTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGtt > 2:732348/1‑93 (MQ=255)
aCTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGtt < 1:232326/93‑1 (MQ=255)
cTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTg > 2:1098521/1‑93 (MQ=255)
cTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTg < 2:1379160/93‑1 (MQ=255)
ttttttGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTga > 2:217234/1‑93 (MQ=255)
ttttttGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTga > 1:2852550/1‑93 (MQ=255)
ctttttGCCTTTCAGATCAACGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTga > 2:3496769/2‑93 (MQ=255)
ttttttCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTgag < 2:2760064/93‑1 (MQ=255)
tttGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGaa < 1:2003703/93‑1 (MQ=255)
gCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGTGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATc < 2:1456482/93‑1 (MQ=255)
gCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATc < 2:1369939/93‑1 (MQ=255)
ccTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCg < 2:1532798/93‑1 (MQ=255)
cTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGt < 2:1205142/93‑1 (MQ=255)
tttCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTa > 2:1622191/1‑93 (MQ=255)
tCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTAtt > 1:2470673/1‑93 (MQ=255)
aGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTAtttt > 1:2235731/1‑93 (MQ=255)
aGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTAtttt > 1:444579/1‑93 (MQ=255)
tcatcGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTc > 2:2637766/1‑93 (MQ=255)
tcatcGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTc < 2:665064/93‑1 (MQ=255)
tcatcGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTc > 2:3895205/1‑93 (MQ=255)
tcatcGGCTGTTTTAATGGTGCCATCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTc < 2:2605540/93‑1 (MQ=255)
catcGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACTAGCGCCTGAATACCAGAAATGGAGTACGGGGCTGAGAAATCGTATTTTTTCt > 2:3884648/1‑93 (MQ=255)
catcGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGAGTGCGGGGTTGAGTAATCGTATTTTTTCt > 2:753143/1‑93 (MQ=255)
atcGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCtt < 1:723596/93‑1 (MQ=255)
atcGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCtt > 1:2596789/1‑93 (MQ=255)
atcGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGGTGAGAAATCGTATTTTTTCtt > 2:2225359/1‑93 (MQ=255)
tcGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTg < 1:173725/93‑1 (MQ=255)
cGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTgc < 2:243774/93‑1 (MQ=255)
cGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTgc < 2:1740820/93‑1 (MQ=255)
gCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTgcgc < 1:2930370/93‑1 (MQ=255)
gTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCtca > 1:1820124/1‑93 (MQ=255)
gTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCtca > 1:659358/1‑93 (MQ=255)
gTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCtca > 1:4414172/1‑93 (MQ=255)
ttAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGCAATCGTATTTTTTCTTGCGCtcatca > 1:3577851/1‑93 (MQ=255)
ttAATGGTGCCTTCGTTACCTTGTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCtcatca < 2:298367/93‑1 (MQ=255)
aaTGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGa > 1:2133966/1‑93 (MQ=255)
aTGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGCAATCGTATTTTTTCTTGCGCTCATCAGaa > 1:2808943/1‑93 (MQ=255)
aTGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGaa > 1:2969460/1‑93 (MQ=255)
aTGGTGCCTTCGTTACCTTTTTTCACCAGCGCCCGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGaa > 1:935714/1‑93 (MQ=255)
tGGTGTCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGaaa < 2:3751687/93‑1 (MQ=255)
tGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGaaa < 2:2935872/93‑1 (MQ=255)
tGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGaaa > 1:2961354/1‑93 (MQ=255)
tGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGaaa < 2:236611/93‑1 (MQ=255)
ggTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAAt < 1:328658/93‑1 (MQ=255)
ggTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAAt < 1:199682/93‑1 (MQ=255)
gCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGt < 2:411855/93‑1 (MQ=255)
gCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGt > 1:1153136/1‑93 (MQ=255)
ccTTCGTTTCCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTg < 1:3981456/93‑1 (MQ=255)
cTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGa > 1:3294247/1‑93 (MQ=255)
cTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGa > 1:264337/1‑93 (MQ=255)
tCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGAcc > 1:1107514/1‑93 (MQ=255)
cGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCt < 1:1337115/93‑1 (MQ=255)
gTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTg < 1:4427309/93‑1 (MQ=255)
gTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTg > 1:2813190/1‑93 (MQ=255)
ttACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGa > 1:2889768/1‑93 (MQ=255)
tACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGAt < 2:3185089/93‑1 (MQ=255)
tccTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGAtt < 1:99114/92‑1 (MQ=255)
aCCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGAtt > 1:305730/1‑93 (MQ=255)
aCCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGAtt > 2:4411477/1‑93 (MQ=255)
ccTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTa > 2:661525/1‑93 (MQ=255)
ttttttCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAAt > 1:2094957/1‑93 (MQ=255)
ttttttCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAAt > 1:2713193/1‑93 (MQ=255)
tttttCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATc > 2:2376025/1‑93 (MQ=255)
tttttCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATc > 2:1936600/1‑93 (MQ=255)
tCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATcaccc > 1:3795846/1‑92 (MQ=255)
tCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATcacca > 2:148694/1‑93 (MQ=255)
cACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATcaccac < 1:251862/93‑1 (MQ=255)
aCCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACcaca > 1:2041539/1‑93 (MQ=255)
aGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCa > 2:1676711/1‑93 (MQ=255)
gcCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATa < 2:3811323/93‑1 (MQ=255)
gcCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATa > 1:3264405/1‑93 (MQ=255)
gcCTGAATACCAGAAATGGTGTACGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATa > 2:1590269/1‑93 (MQ=255)
ccTGAATACCAGAAATGGTGTGC‑GGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACg > 2:1961736/1‑93 (MQ=255)
cTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACg > 2:2416343/1‑93 (MQ=255)
tGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGt < 1:1146305/93‑1 (MQ=255)
tGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGt > 1:3119674/1‑93 (MQ=255)
tGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGt < 1:45000/93‑1 (MQ=255)
tGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGt > 2:3937405/1‑93 (MQ=255)
tGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGt > 2:278431/1‑93 (MQ=255)
aTACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTa < 1:1586789/93‑1 (MQ=255)
aTACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTa < 1:3748787/93‑1 (MQ=255)
aTACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTa > 1:49590/1‑93 (MQ=255)
aCCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTaga < 1:2293763/93‑1 (MQ=255)
aCCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTaga < 2:2726089/93‑1 (MQ=255)
ccAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTagag < 2:4283022/93‑1 (MQ=255)
cAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGt < 2:4092633/93‑1 (MQ=255)
gAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTcc > 2:219491/1‑93 (MQ=255)
gAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTcc < 2:2380572/93‑1 (MQ=255)
aaTGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAg > 1:394819/1‑93 (MQ=255)
tGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCg > 1:238276/1‑93 (MQ=255)
ggTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGa < 1:254622/93‑1 (MQ=255)
ggTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGa < 2:356903/93‑1 (MQ=255)
gtgtGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGAc < 1:1319387/93‑1 (MQ=255)
gtgtACGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGAc < 1:1964833/93‑1 (MQ=255)
|
CCCACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTACGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGAC > NC_000913/1997951‑1998127
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGACCCCCACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTACGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGACGCCA > NC_000913/1997946‑1998131
|
cgcccccactTTTTTTGCCTGTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTG < SRR4302544.3902957/84‑1 (MQ=60)
CGCCCCCCACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTG < SRR4302544.4791037/94‑1 (MQ=60)
CGACCCCCACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTG > SRR4302544.4728236/1‑94 (MQ=60)
CCCCACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGG > SRR4302544.3704460/1‑94 (MQ=60)
CCACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGT > SRR4302544.3661514/1‑94 (MQ=60)
CCTTTTTGGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATGCCAGAAATGGTGTGCGGGGTTG < SRR4302544.2662561/94‑1 (MQ=60)
ACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTG < SRR4302544.234747/94‑1 (MQ=60)
ACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTACGGGGTTG > SRR4302544.2696049/1‑94 (MQ=60)
CTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGA > SRR4302544.2416552/1‑94 (MQ=60)
CTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGA > SRR4302544.2880112/1‑94 (MQ=60)
TTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAA > SRR4302544.3438215/1‑94 (MQ=60)
TTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAA < SRR4302544.2023164/94‑1 (MQ=60)
TTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAAT > SRR4302544.2211817/1‑94 (MQ=60)
CTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTA > SRR4302544.3097199/1‑94 (MQ=60)
TTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATT > SRR4302544.2494283/1‑94 (MQ=60)
CAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTT > SRR4302544.2256756/1‑94 (MQ=60)
CAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTT > SRR4302544.449020/1‑94 (MQ=60)
CATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTT > SRR4302544.2621756/1‑94 (MQ=60)
ATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTG < SRR4302544.2852906/94‑1 (MQ=60)
ATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTG < SRR4302544.730711/94‑1 (MQ=60)
TCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGC < SRR4302544.175439/94‑1 (MQ=60)
GCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCT < SRR4302544.2958528/94‑1 (MQ=60)
TGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCA > SRR4302544.377406/1‑94 (MQ=60)
TGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCA > SRR4302544.1837873/1‑94 (MQ=60)
TGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCA > SRR4302544.4458736/1‑94 (MQ=60)
TGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCA > SRR4302544.665878/1‑94 (MQ=60)
TTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGCAATCGTATTTTTTCTTGCGCTCATCA > SRR4302544.3612168/1‑94 (MQ=60)
TAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGA > SRR4302544.2154382/1‑94 (MQ=60)
AATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGCAATCGTATTTTTTCTTGCGCTCATCAGAA > SRR4302544.2836042/1‑94 (MQ=60)
AATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAA > SRR4302544.2997935/1‑94 (MQ=60)
AATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCCGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAA > SRR4302544.944931/1‑94 (MQ=60)
ATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAA > SRR4302544.2989779/1‑94 (MQ=60)
TGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAAT < SRR4302544.1818026/94‑1 (MQ=60)
GGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATG < SRR4302544.332075/94‑1 (MQ=60)
GGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATG < SRR4302544.201704/94‑1 (MQ=60)
TGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGT > SRR4302544.1164602/1‑94 (MQ=60)
CCTTCGTTTCCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGA < SRR4302544.4021081/94‑1 (MQ=60)
CCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGA > SRR4302544.3325623/1‑94 (MQ=60)
CCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGA > SRR4302544.267130/1‑94 (MQ=60)
CTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGAGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGAC > SRR4302544.2993645/1‑94 (MQ=60)
TTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACC > SRR4302544.1118557/1‑94 (MQ=60)
tcttgACCTTTTTTCACCAGCGCCTGAATACCAGAAATGTTGTGCGGGTGTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCT < SRR4302544.705841/89‑1 (MQ=60)
CGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTG > SRR4302544.2840338/1‑94 (MQ=60)
CGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTG < SRR4302544.1350304/94‑1 (MQ=60)
GTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGA > SRR4302544.2917619/1‑94 (MQ=60)
GTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGA < SRR4302544.4471981/94‑1 (MQ=60)
TACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATT > SRR4302544.308900/1‑94 (MQ=60)
tccgtgTTTCACCAGCGCCTGAATACCAGAAAGGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTA < SRR4302544.1169902/88‑1 (MQ=60)
TCCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTA < SRR4302544.100020/94‑1 (MQ=60)
CTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAAT > SRR4302544.2739295/1‑94 (MQ=60)
CTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAAT < SRR4302544.4487136/94‑1 (MQ=60)
CTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAAT > SRR4302544.2115114/1‑94 (MQ=60)
TTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGTGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCA > SRR4302544.2028137/1‑94 (MQ=60)
TTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCC > SRR4302544.3833434/1‑94 (MQ=60)
CACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACA < SRR4302544.254506/94‑1 (MQ=60)
CACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACA > SRR4302544.2061239/1‑94 (MQ=60)
CACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGCTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACA > SRR4302544.4678178/1‑94 (MQ=60)
ACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACAT > SRR4302544.3311669/1‑94 (MQ=60)
GCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAAT < SRR4302544.2953704/94‑1 (MQ=60)
CGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATA > SRR4302544.4043662/1‑94 (MQ=60)
CGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATA > SRR4302544.3295575/1‑94 (MQ=60)
CCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACG < SRR4302544.464615/94‑1 (MQ=60)
CTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGT > SRR4302544.3149338/1‑94 (MQ=60)
TGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTT < SRR4302544.1157709/94‑1 (MQ=60)
TGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTT < SRR4302544.45447/94‑1 (MQ=60)
AATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTA > SRR4302544.2644685/1‑94 (MQ=60)
AATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTA > SRR4302544.50088/1‑94 (MQ=60)
ATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAG < SRR4302544.3786024/94‑1 (MQ=60)
ATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAG < SRR4302544.2550765/94‑1 (MQ=60)
ATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAG < SRR4302544.1602449/94‑1 (MQ=60)
TACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGA < SRR4302544.149195/94‑1 (MQ=60)
ACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAG < SRR4302544.2315385/94‑1 (MQ=60)
ACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAG < SRR4302544.2315515/94‑1 (MQ=60)
GAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCA > SRR4302544.2000716/1‑94 (MQ=60)
GAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCA < SRR4302544.3913167/94‑1 (MQ=60)
AAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAG > SRR4302544.398821/1‑94 (MQ=60)
ATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCG > SRR4302544.240750/1‑94 (MQ=60)
GGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGAC < SRR4302544.257323/94‑1 (MQ=60)
GTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGACG < SRR4302544.1332357/94‑1 (MQ=60)
GTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGACG < SRR4302544.1332356/94‑1 (MQ=60)
GTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGACG < SRR4302544.695594/94‑1 (MQ=60)
GTGTACGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGACG < SRR4302544.1983911/94‑1 (MQ=60)
GTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGACGCC < SRR4302544.4512229/94‑1 (MQ=60)
TACCGGGTTTAGAAATCGTATTTTTTCTTTCGCTCATCAGAAATTGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCATCGACGCCA < SRR4302544.2997338/94‑1 (MQ=60)
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CGACCCCCACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTACGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGACGCCA > NC_000913/1997946‑1998131
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
