Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,419,074 |
A→G |
N145S (AAC→AGC) |
yfcG → |
putative S‑transferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,419,074 | 0 | A | G | 99.4%
| 531.1
/ ‑6.6
| 165 | N145S (AAC→AGC) | yfcG | putative S‑transferase |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (81/83); total (82/83) |
| Fisher's exact test for biased strand distribution p-value = 4.97e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 |
Only 100 of 171 total aligned reads displayed.
TCATCATTTTAATCACGCAG‑CCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTC > NC_000913/2418985‑2419163
|
catcattttaatcacgcagccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCa > 2:1210557‑M2/22‑93 (MQ=255)
catcatTTTAATCACGCAGCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCaa < 1:1176288/93‑1 (MQ=255)
atccttttaatcacgcagccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCaa > 2:2475188‑M2/21‑93 (MQ=255)
atcattttaatcacgcagccCCCACCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCaa < 2:2629919‑M2/73‑1 (MQ=255)
tcattttaatcacgcagccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAg < 2:3714371‑M2/74‑1 (MQ=255)
atcatTTTAATCACGCAG‑CCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGc > 2:1973578/1‑93 (MQ=255)
attttaatcacgcagccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCg < 2:3811462‑M2/76‑1 (MQ=255)
attttaatcacgcagccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCg < 2:1207095‑M2/76‑1 (MQ=255)
ttgaatcacgcagccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGc < 2:3486681‑M2/78‑1 (MQ=255)
ttaatcacgcagccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCt < 2:2053911‑M2/79‑1 (MQ=255)
taatcacgcagccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTg < 2:4129442‑M2/80‑1 (MQ=255)
atcacgcagccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGa > 1:1037141‑M2/12‑93 (MQ=255)
tcacgcagccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGaa > 2:1900696‑M2/11‑93 (MQ=255)
cacgcagcccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAATTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGaa > 2:4483074‑M2/11‑93 (MQ=255)
gcagccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACt < 2:2010896‑M2/87‑1 (MQ=255)
gcagccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACt > 1:2762988‑M2/7‑93 (MQ=255)
accCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGc < 2:3852685‑M2/90‑1 (MQ=255)
cCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGccc > 1:3341707‑M2/2‑93 (MQ=255)
cCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGccc < 1:3650541‑M2/92‑1 (MQ=255)
cCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGccc < 1:3072078‑M2/92‑1 (MQ=255)
ccccccAAACCATTCCTTACGCTATTGATCGTTATCAGGTTGAACCTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCct < 1:4205472/93‑1 (MQ=255)
ccccccAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCct > 1:2058071/1‑93 (MQ=255)
cccccAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCctg > 2:2906505/1‑93 (MQ=255)
ccccAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCctgg > 1:2754463/1‑93 (MQ=255)
cccAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCctggc < 1:4506217/93‑1 (MQ=255)
cccAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCctggc < 1:1247749/93‑1 (MQ=255)
cccAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACGCGCCctggc > 1:2901131/1‑93 (MQ=255)
cAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCctggctg > 2:372879/1‑93 (MQ=255)
cAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCctggctg < 2:3674391/93‑1 (MQ=255)
aaCCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTggg > 1:4045570/1‑93 (MQ=255)
aaCCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAACGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTggg > 2:503884/1‑93 (MQ=255)
aaCCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAACGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTggg > 2:503885/1‑93 (MQ=255)
aCCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTTAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGa < 2:3185789/93‑1 (MQ=255)
aCCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGa < 2:784107/93‑1 (MQ=255)
ccATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAg < 2:3824992/93‑1 (MQ=255)
aTTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGc > 2:4274218/1‑93 (MQ=255)
aTTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGc > 1:301469/1‑93 (MQ=255)
aTTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGc < 1:296347/93‑1 (MQ=255)
ttccttccGCTATTGAACGTTATCAGGTTGCAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCg < 1:652428/93‑1 (MQ=255)
ttCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCg < 1:652429/93‑1 (MQ=255)
tCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCga < 1:1668984/93‑1 (MQ=255)
ccTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGAGGCTGGAAAACTCGCCCTGGCTGGGAGGCgag > 1:4640815/1‑93 (MQ=255)
cTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCgaga < 2:4085661/93‑1 (MQ=255)
ttACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGaa < 1:3641315/93‑1 (MQ=255)
tACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAAc > 1:1233729/1‑93 (MQ=255)
tACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAAc > 1:3134976/1‑93 (MQ=255)
gCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTAc < 2:1538711/93‑1 (MQ=255)
cTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACa < 1:3462071/93‑1 (MQ=255)
tATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAg > 1:1711766/1‑93 (MQ=255)
aTTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTAAAGc > 2:69776/1‑93 (MQ=255)
aaCGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTg < 2:1027433/93‑1 (MQ=255)
aaCGATATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTg > 1:164849/1‑93 (MQ=255)
tATCAGGTTGACACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGat < 2:1981397/93‑1 (MQ=255)
aTCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGata > 2:2272300/1‑93 (MQ=255)
tCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGctat > 2:111433/1‑93 (MQ=255)
cAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATAtt < 2:3150415/93‑1 (MQ=255)
aGGTTGAACCTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTg < 1:1655098/93‑1 (MQ=255)
aGGTTGAAACTCTGCGTCTTTACAATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGataata < 2:4216635/93‑4 (MQ=255)
ggTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGGGGATATTGc > 1:1439620/1‑93 (MQ=255)
ggTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGc > 1:2619530/1‑93 (MQ=255)
gTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGcc > 1:27220/1‑93 (MQ=255)
ttGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCct < 1:2800283/93‑1 (MQ=255)
gAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCctgc > 2:3396068/1‑93 (MQ=255)
gAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCctgc > 2:3326181/1‑93 (MQ=255)
aaaCTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCctgct < 2:1102923/93‑1 (MQ=255)
aaCTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCctgctg < 1:1592799/93‑1 (MQ=255)
aaCTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCctgctg > 2:1734839/1‑93 (MQ=255)
aaCTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCctgctg < 1:4376583/93‑1 (MQ=255)
aaCTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCctgctg > 1:559/1‑93 (MQ=255)
aCTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTgg > 2:3114943/1‑93 (MQ=255)
aCTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTgg > 2:901790/1‑93 (MQ=255)
tCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGcc < 2:151574/93‑1 (MQ=255)
tCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGcc < 2:40288/93‑1 (MQ=255)
aGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGt < 1:3992420/93‑1 (MQ=255)
aGCGTCTTTACCAGGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGt < 2:528127/93‑1 (MQ=255)
gCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTg < 2:1502091/93‑1 (MQ=255)
gCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTg < 2:1253967/93‑1 (MQ=255)
gTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTggg > 2:804827/1‑93 (MQ=255)
gTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTggg > 1:3397478/1‑93 (MQ=255)
tttACCATGTCCTGAGCAAGCGGCTGGAAAACCCGCCCTGGCTGGGAGGCGCGACCCACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTa > 2:4130215/1‑93 (MQ=255)
tttACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTa > 1:1009009/1‑93 (MQ=255)
tttACCATCTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTa < 1:1746188/93‑1 (MQ=255)
ccATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGc > 1:1329069/1‑93 (MQ=255)
acATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGc < 1:745080/92‑1 (MQ=255)
cATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGcc > 1:3475786/1‑93 (MQ=255)
aTGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCt > 2:3267738/1‑93 (MQ=255)
aTGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCt > 1:1961076/1‑93 (MQ=255)
aTGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCt > 1:2557049/1‑93 (MQ=255)
aTGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCt < 1:232902/93‑1 (MQ=255)
tGTACTGAGCAAGCGGCTGGAACACTCGCCCTAGCTGGGAGGCGAGAACTACAGCATTGCGTATATTGCCTGCTGGCCGTGGGTTAATGCCTg > 2:1597845/1‑93 (MQ=255)
tGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTg < 2:2683958/93‑1 (MQ=255)
tGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTg > 2:1597844/1‑93 (MQ=255)
tGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTg < 2:431218/93‑1 (MQ=255)
gTACTGAGCAAGCGGCTGGAAAACTCGCCCTGACTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTgg < 2:1149304/93‑1 (MQ=255)
gTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTgg < 1:3279705/93‑1 (MQ=255)
tACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTggc > 1:2832541/1‑92 (MQ=255)
tACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGa > 2:4252615/1‑93 (MQ=255)
aCTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGAc < 1:383459/93‑1 (MQ=255)
tGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTc > 1:2245258/1‑93 (MQ=255)
tGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTc > 2:1464170/1‑93 (MQ=255)
|
TCATCATTTTAATCACGCAG‑CCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTC > NC_000913/2418985‑2419163
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AATCATCATTTTAATCACGCAG‑‑CCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTC > NC_000913/2418983‑2419163
|
AATCATCATTTTAATCACGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAG > SRR4302544.3189417/1‑94 (MQ=60)
ATCATCATTTTAATCACGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGC > SRR4302544.151665/1‑94 (MQ=60)
ACATCATTTTAATCACGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCA < SRR4302544.1342894/94‑1 (MQ=60)
CATCATTTTAATCACGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAA > SRR4302544.3057120/1‑94 (MQ=60)
CATCATTTTAATCACGCAGC‑CCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAG < SRR4302544.1188014/94‑1 (MQ=60)
CATTTTAATCACGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCG < SRR4302544.300818/94‑1 (MQ=60)
TTTAATCACGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCT < SRR4302544.3377589/94‑1 (MQ=60)
AATCACGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGA > SRR4302544.1047452/1‑94 (MQ=60)
CGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACT > SRR4302544.1108597/1‑94 (MQ=60)
CGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACT > SRR4302544.2789562/1‑94 (MQ=60)
CGCAGCCCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAAAT > SRR4302544.2554184/1‑94 (MQ=60)
C‑‑CCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCT < SRR4302544.3101354/94‑1 (MQ=60)
C‑‑CCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCT < SRR4302544.3686967/94‑1 (MQ=60)
C‑‑CCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCT < SRR4302544.3498776/94‑1 (MQ=60)
C‑‑CCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCT > SRR4302544.2077870/1‑94 (MQ=60)
C‑‑CCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCT > SRR4302544.3273575/1‑94 (MQ=60)
C‑‑CCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCT < SRR4302544.290130/94‑1 (MQ=60)
C‑‑CCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCT < SRR4302544.1730963/94‑1 (MQ=60)
ccCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCC > SRR4302544.3373569/3‑94 (MQ=60)
CCCCCCAAACCATTCCTTACGCTATTGATCGTTATCAGGTTGAACCTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTG < SRR4302544.4247644/94‑1 (MQ=60)
CCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGG > SRR4302544.2780977/1‑94 (MQ=60)
CCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACGCGCCCTGGC > SRR4302544.2929067/1‑94 (MQ=60)
CCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCT < SRR4302544.4551404/94‑1 (MQ=60)
CCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCT < SRR4302544.1260037/94‑1 (MQ=60)
CCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTG > SRR4302544.3323727/1‑94 (MQ=60)
CCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTG > SRR4302544.740404/1‑94 (MQ=60)
CCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTG > SRR4302544.3820878/1‑94 (MQ=60)
AAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGG > SRR4302544.2777344/1‑94 (MQ=60)
AAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGG > SRR4302544.4085869/1‑94 (MQ=60)
AACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGA < SRR4302544.656619/94‑1 (MQ=60)
ACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAG > SRR4302544.3582110/1‑94 (MQ=60)
CATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGC > SRR4302544.304592/1‑94 (MQ=60)
ATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCG < SRR4302544.299412/94‑1 (MQ=60)
TTCCTTCCGCTATTGAACGTTATCAGGTTGCAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGA < SRR4302544.658887/94‑1 (MQ=60)
TTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGA < SRR4302544.658888/94‑1 (MQ=60)
TCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGCAAACTCGCCCTGGCTGGGAGGCGAG > SRR4302544.22225/1‑94 (MQ=60)
TCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAG < SRR4302544.1685426/94‑1 (MQ=60)
TCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGAGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAG > SRR4302544.4686782/1‑94 (MQ=60)
TTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAAC > SRR4302544.3164754/1‑94 (MQ=60)
TTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAAC > SRR4302544.1245930/1‑94 (MQ=60)
TTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAAC < SRR4302544.3677642/94‑1 (MQ=60)
CGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTAC > SRR4302544.4354213/1‑94 (MQ=60)
CTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAG < SRR4302544.3495109/94‑1 (MQ=60)
CTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAG > SRR4302544.1728616/1‑94 (MQ=60)
GAACGTTATCAGGTTGAAACTCAGCGTCTATACCATGTACTGAGCAAGCGGCTGGAAAGCTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTG < SRR4302544.269618/94‑1 (MQ=60)
GAACGATATCAGGTTGAAACTCAGCGTCTTTACCGTGTACTGAGCAAGCGGCTGGAAAAacccacctggctggggggcgagaaataaacgattg > SRR4302544.166609/1‑59 (MQ=60)
GAACGATATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTG > SRR4302544.166467/1‑94 (MQ=60)
ACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCG < SRR4302544.246524/94‑1 (MQ=60)
GTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGA > SRR4302544.2809385/1‑94 (MQ=60)
TATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAACCGGCTGGAAAACCCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGAGA > SRR4302544.1613349/1‑94 (MQ=60)
CAGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTG < SRR4302544.3950627/94‑1 (MQ=60)
AGGTTGAACCTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGC < SRR4302544.1671421/94‑1 (MQ=60)
AGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGGGGATATTGC > SRR4302544.1453949/1‑94 (MQ=60)
AGGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGC > SRR4302544.2644663/1‑94 (MQ=60)
GGTTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCC > SRR4302544.27480/1‑94 (MQ=60)
TTGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTG < SRR4302544.2827266/94‑1 (MQ=60)
TGAAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGC > SRR4302544.1265628/1‑94 (MQ=60)
AAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTG > SRR4302544.566/1‑94 (MQ=60)
AAACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTG < SRR4302544.4530538/94‑1 (MQ=60)
AACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGG < SRR4302544.4420940/94‑1 (MQ=60)
AACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGG < SRR4302544.1608495/94‑1 (MQ=60)
AACTCAGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGG < SRR4302544.1348527/94‑1 (MQ=60)
AGCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTG < SRR4302544.4032161/94‑1 (MQ=60)
AGCGGCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCCGCTGCGCGTG > SRR4302544.2850951/1‑94 (MQ=60)
GCGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGG < SRR4302544.526299/94‑1 (MQ=60)
CGTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGG > SRR4302544.3429967/1‑94 (MQ=60)
GTCTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGT > SRR4302544.1676172/1‑94 (MQ=60)
CTTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTA > SRR4302544.1019048/1‑94 (MQ=60)
TTTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAA < SRR4302544.1829000/94‑1 (MQ=60)
TTTACCATCTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAA < SRR4302544.1763280/94‑1 (MQ=60)
TTACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAAT < SRR4302544.120927/94‑1 (MQ=60)
ACCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGC > SRR4302544.1342144/1‑94 (MQ=60)
CCATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCC > SRR4302544.3508932/1‑94 (MQ=60)
ACATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCC < SRR4302544.752372/94‑1 (MQ=60)
CATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCT > SRR4302544.2581603/1‑94 (MQ=60)
CATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCT < SRR4302544.1671248/94‑1 (MQ=60)
CATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCT > SRR4302544.1980113/1‑94 (MQ=60)
ATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTG < SRR4302544.997714/94‑1 (MQ=60)
ATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTG < SRR4302544.235329/94‑1 (MQ=60)
ATGTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTG > SRR4302544.4125073/1‑94 (MQ=60)
GTACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGC > SRR4302544.2859912/1‑94 (MQ=60)
GTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGA < SRR4302544.3310959/94‑1 (MQ=60)
ACTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACT < SRR4302544.387362/94‑1 (MQ=60)
CTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTC > SRR4302544.2266375/1‑94 (MQ=60)
CTGAGCAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTC < SRR4302544.2280096/94‑1 (MQ=60)
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AATCATCATTTTAATCACGCAG‑‑CCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTC > NC_000913/2418983‑2419163
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
