Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,509,958 |
Δ1 bp |
intergenic (‑195/+314) |
yhfZ ← / ← trpS |
hypothetical protein/tryptophan tRNA synthetase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,509,956 | 0 | T | . | 99.5%
| 927.5
/ ‑2.6
| 204 | intergenic (‑193/+316) | yhfZ/trpS | hypothetical protein/tryptophan tRNA synthetase |
| Reads supporting (aligned to +/- strand): ref base T (1/0); major base . (88/114); minor base A (0/1); total (89/115) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.67e-01 |
Only 100 of 224 total aligned reads displayed.
CGGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCCTTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAG > NC_000913/3509864‑3510044
|
cGGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCct < 2:3618297/93‑1 (MQ=255)
gCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCcttc > 2:2832848/1‑92 (MQ=255)
gCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCcttc < 1:2811980/93‑2 (MQ=255)
gCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCcttc < 1:2206452/93‑2 (MQ=255)
attTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCtttttt < 2:3581371/93‑1 (MQ=255)
attTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCtttttt < 1:1988289/93‑1 (MQ=255)
gCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATa > 1:1159811/1‑93 (MQ=255)
cAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATaaa < 1:4300903/93‑1 (MQ=255)
cAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTCTTGATaaa > 1:2628775/1‑93 (MQ=255)
aGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAc < 2:1673857/93‑1 (MQ=255)
aGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAc < 1:4734216/93‑1 (MQ=255)
aGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAc < 1:2548849/93‑1 (MQ=255)
gCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACg > 1:447001/1‑93 (MQ=255)
gCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACg > 1:2711682/1‑93 (MQ=255)
cTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGt > 2:508958/1‑93 (MQ=255)
cTCATCGATGGTTTTCAATCGATTACCTCACTTTTCACCCAACAAATAACGGTCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGt < 2:4100791/93‑1 (MQ=255)
tCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGtt < 1:200350/93‑1 (MQ=255)
tCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGtt < 1:461460/93‑1 (MQ=255)
tCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGtt < 2:4386686/93‑1 (MQ=255)
tCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGCCGCC‑TTCTTTTTTGATAATCGTTCgc > 2:3066419/1‑92 (MQ=255)
tCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGa < 1:3768079/93‑1 (MQ=255)
tCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGa > 2:3325096/1‑93 (MQ=255)
tCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGa > 1:3841636/1‑93 (MQ=255)
tCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGa < 2:1268604/93‑1 (MQ=255)
tCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGa > 1:2764373/1‑93 (MQ=255)
cTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGCCGCC‑TTCTTTTTTTATAAACGTTCGAc > 2:318296/1‑93 (MQ=255)
tATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑GTCTTTTTTGATAAACGTTCGACg > 2:3388507/1‑93 (MQ=255)
tgTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCat < 1:3400943/92‑1 (MQ=255)
tttCAATCGATTACCGCACTTTTCCCCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCataat < 2:857111/93‑1 (MQ=255)
tttCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCataat > 2:4305411/1‑93 (MQ=255)
ttCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCataata < 1:2113678/93‑1 (MQ=255)
tCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCAtaataa > 2:3156791/1‑93 (MQ=255)
tCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCAtaataa < 2:188645/93‑1 (MQ=255)
tCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCAtaataa < 2:2620487/93‑1 (MQ=255)
cAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATaaa < 1:1450495/93‑1 (MQ=255)
aaTCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAAt > 2:2687081/1‑93 (MQ=255)
aTCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAAtt > 2:671813/1‑93 (MQ=255)
aTCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAAtt < 2:1749997/93‑1 (MQ=255)
tCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAAttt < 2:2908540/93‑1 (MQ=255)
tCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAAttt < 1:3809350/93‑1 (MQ=255)
gATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGACGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTc > 2:4501051/1‑93 (MQ=255)
aTTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCa > 2:4702425/1‑93 (MQ=255)
ttACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAg > 1:1856877/1‑93 (MQ=255)
ttACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAg > 2:2561749/1‑93 (MQ=255)
tACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGt < 2:4124802/93‑1 (MQ=255)
tACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGt > 2:581527/1‑93 (MQ=255)
tACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGt > 1:620125/1‑93 (MQ=255)
aCCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTa < 2:1525487/93‑1 (MQ=255)
ccGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTaa > 2:3342958/1‑93 (MQ=255)
gCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAt < 1:3612061/93‑1 (MQ=255)
gCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAt < 1:728336/93‑1 (MQ=255)
cACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAtt < 2:3864015/93‑1 (MQ=255)
cTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGTC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGa < 1:3529691/93‑1 (MQ=255)
cTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGa < 2:3776997/93‑1 (MQ=255)
cTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGa > 1:3168852/1‑93 (MQ=255)
cTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGa > 2:189944/1‑93 (MQ=255)
tttCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAat < 1:1813033/93‑1 (MQ=255)
ttCTCCCAGTAAATATCGGGCCAGCGTAGGAAGGACGACACC‑TTCTTTTTTGATAACCCTTCGACGCATAATAAATTTTCAGTAAATTGAata < 2:2395429/93‑1 (MQ=255)
ttCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAata < 2:959013/93‑1 (MQ=255)
ttCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAata < 1:776709/93‑1 (MQ=255)
tCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAatat < 1:2041909/93‑1 (MQ=255)
cccccAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATAtt < 1:1656909/91‑1 (MQ=255)
cACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATAtt > 1:2989046/1‑93 (MQ=255)
cccAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTta < 1:4229957/93‑1 (MQ=255)
caacaaATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTtata > 2:2149918/1‑93 (MQ=255)
caacaaATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTtata < 1:4014809/93‑1 (MQ=255)
aacaaATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTatat < 1:3750404/93‑1 (MQ=255)
acaaATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATc > 2:383251/1‑93 (MQ=255)
aaaTAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCtt > 2:4266261/1‑93 (MQ=255)
aaaTAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCtt > 1:4355118/1‑93 (MQ=255)
aaTAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTc < 2:4201663/93‑1 (MQ=255)
aaTAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTc < 2:1020714/93‑1 (MQ=255)
aaTAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTc > 2:2449874/1‑93 (MQ=255)
aTAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCa < 1:870597/93‑1 (MQ=255)
tAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAg < 1:3321256/93‑1 (MQ=255)
aaCGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAgg > 1:3250975/1‑93 (MQ=255)
aCGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAAGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGa > 1:64598/1‑93 (MQ=255)
cGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGaa > 2:3934115/1‑93 (MQ=255)
gggCCAGCGTCGTGCTGTCGCCGCC‑TTCTTTTTTGCTAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAAt < 1:4215197/93‑1 (MQ=255)
gggCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAAt > 2:1871643/1‑93 (MQ=255)
ggCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAAtt > 2:2729614/1‑93 (MQ=255)
ccAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAAttta > 1:1009419/1‑92 (MQ=255)
aGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGaa < 2:3212192/93‑1 (MQ=255)
aGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGaa > 2:3420238/1‑93 (MQ=255)
aGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGaa > 1:4563280/1‑93 (MQ=255)
aGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGaa < 2:2192184/93‑1 (MQ=255)
gCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAg < 2:2279009/93‑1 (MQ=255)
cgtcgtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGa > 1:1267570/1‑93 (MQ=255)
gtcgtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGAt > 1:2240414/1‑93 (MQ=255)
gtcgtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGAAATTTGAAGAt < 1:2889899/93‑1 (MQ=255)
tcgtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATa > 2:4338739/1‑93 (MQ=255)
gatgaCGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGgc < 2:1570762/93‑1 (MQ=255)
gatgaCGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGgc > 2:1697927/1‑93 (MQ=255)
gatgaCGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGgc < 1:1187425/93‑1 (MQ=255)
atgaCGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGgcg < 2:4550840/93‑1 (MQ=255)
atgaCGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGgcg > 2:730036/1‑93 (MQ=255)
acgacgCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCaa < 2:104640/93‑1 (MQ=255)
cgacgCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAAc < 1:1925915/93‑1 (MQ=255)
gacgCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACa < 2:3401318/93‑1 (MQ=255)
acgCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAg > 1:2410942/1‑93 (MQ=255)
|
CGGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCCTTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAG > NC_000913/3509864‑3510044
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCCTTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGAT > NC_000913/3509865‑3510050
|
GGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACACCTTC > SRR4302544.3797685/1‑94 (MQ=60)
GATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTT < SRR4302544.4636019/94‑1 (MQ=60)
ATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTT > SRR4302544.501050/1‑94 (MQ=60)
TCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTT > SRR4302544.129889/1‑94 (MQ=60)
ATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTG < SRR4302544.2007590/94‑1 (MQ=60)
TTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGAT < SRR4302544.3875979/94‑1 (MQ=60)
TTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGAT < SRR4302544.2958936/94‑1 (MQ=60)
TTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACG‑CATTCTTTTTTGAT < SRR4302544.4446300/94‑1 (MQ=60)
TGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATA > SRR4302544.1171362/1‑94 (MQ=60)
GCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAA > SRR4302544.2437577/1‑94 (MQ=60)
CCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTCTTGATAAA > SRR4302544.2653977/1‑94 (MQ=60)
CAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAC < SRR4302544.4344782/94‑1 (MQ=60)
CAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAC < SRR4302544.2313257/94‑1 (MQ=60)
CAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAC < SRR4302544.2879178/94‑1 (MQ=60)
AGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACG > SRR4302544.451454/1‑94 (MQ=60)
AGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACG < SRR4302544.2573330/94‑1 (MQ=60)
AGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACG > SRR4302544.2737762/1‑94 (MQ=60)
AGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACG < SRR4302544.413171/94‑1 (MQ=60)
AGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACG < SRR4302544.4780898/94‑1 (MQ=60)
CTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTT > SRR4302544.3710975/1‑94 (MQ=60)
CTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTT < SRR4302544.118746/94‑1 (MQ=60)
CTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTT > SRR4302544.699718/1‑94 (MQ=60)
TCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTC < SRR4302544.465994/94‑1 (MQ=60)
TCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTC < SRR4302544.202379/94‑1 (MQ=60)
CATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCG > SRR4302544.856428/1‑94 (MQ=60)
ATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGA > SRR4302544.2790962/1‑94 (MQ=60)
ATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGA > SRR4302544.3879749/1‑94 (MQ=60)
TCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGAC < SRR4302544.3805445/94‑1 (MQ=60)
CTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACG < SRR4302544.1876837/94‑1 (MQ=60)
CTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACG < SRR4302544.2243402/94‑1 (MQ=60)
TATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGCCGCC‑TTCTTTTTTGATAAACGTTCGACGC > SRR4302544.2009385/1‑94 (MQ=60)
ATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCA > SRR4302544.2182049/1‑94 (MQ=60)
TGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATA < SRR4302544.3433461/94‑1 (MQ=60)
TTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATA < SRR4302544.774449/94‑1 (MQ=60)
TTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAA < SRR4302544.2133992/94‑1 (MQ=60)
CAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAAT < SRR4302544.4578768/94‑1 (MQ=60)
CAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAAT < SRR4302544.1464909/94‑1 (MQ=60)
AATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATT < SRR4302544.2089832/94‑1 (MQ=60)
TCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTT < SRR4302544.3847095/94‑1 (MQ=60)
GATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCA < SRR4302544.2909147/94‑1 (MQ=60)
ATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAG > SRR4302544.1874834/1‑94 (MQ=60)
TTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGT > SRR4302544.2614695/1‑94 (MQ=60)
TTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGT > SRR4302544.626210/1‑94 (MQ=60)
CCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAA < SRR4302544.3457433/94‑1 (MQ=60)
CCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAA < SRR4302544.414637/94‑1 (MQ=60)
CCGCACTTCTCACCCAACAAATACCGGGCCACCGTCGTGACGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATATTAAATTTTCAGTAAA < SRR4302544.2602706/94‑1 (MQ=60)
CGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAT < SRR4302544.4678894/94‑1 (MQ=60)
GCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATT < SRR4302544.3647420/94‑1 (MQ=60)
GCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATT < SRR4302544.2751946/94‑1 (MQ=60)
GCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATT < SRR4302544.735479/94‑1 (MQ=60)
CACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTG > SRR4302544.4405957/1‑94 (MQ=60)
ACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGA > SRR4302544.1051336/1‑94 (MQ=60)
ACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGA > SRR4302544.3199008/1‑94 (MQ=60)
CTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGTC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAA < SRR4302544.3563442/94‑1 (MQ=60)
CTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAA < SRR4302544.3563595/94‑1 (MQ=60)
TTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATA < SRR4302544.1830738/94‑1 (MQ=60)
TTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATA < SRR4302544.2716005/94‑1 (MQ=60)
TTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCCTAATAAATTTTCAGTAAATTGAATAT > SRR4302544.3432155/1‑94 (MQ=60)
TTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATAT > SRR4302544.4315318/1‑94 (MQ=60)
TTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATAT < SRR4302544.784247/94‑1 (MQ=60)
TCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATT > SRR4302544.3017712/1‑94 (MQ=60)
TCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATT < SRR4302544.2061609/94‑1 (MQ=60)
CCCCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTT < SRR4302544.1673239/94‑1 (MQ=60)
CACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTT > SRR4302544.3789268/1‑94 (MQ=60)
CCCAACAAATAACGGGCCAGCGTCGTGATGACTACGCC‑TTCTTTTTTGATAAACGTTAGACGCATAATAAATTTTCAGTAAATTGAATATTTAT < SRR4302544.839669/94‑1 (MQ=60)
CCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTAT < SRR4302544.4273057/94‑1 (MQ=60)
CCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATA > SRR4302544.4392775/1‑94 (MQ=60)
CAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATAT < SRR4302544.4054740/94‑1 (MQ=60)
AACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATC < SRR4302544.3787653/94‑1 (MQ=60)
CAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTT > SRR4302544.4399342/1‑94 (MQ=60)
AATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCA > SRR4302544.1502475/1‑94 (MQ=60)
AATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCA < SRR4302544.1833593/94‑1 (MQ=60)
ATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAG < SRR4302544.879225/94‑1 (MQ=60)
ATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAG < SRR4302544.1246156/94‑1 (MQ=60)
ATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAG < SRR4302544.1468093/94‑1 (MQ=60)
TAACGGGCCAGCGTCGTGATGACGACTCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGG > SRR4302544.1954927/1‑94 (MQ=60)
TAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGG < SRR4302544.3352894/94‑1 (MQ=60)
TAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGG > SRR4302544.3282074/1‑94 (MQ=60)
TAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGA > SRR4302544.3282075/1‑94 (MQ=60)
AACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAAGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGA > SRR4302544.65245/1‑94 (MQ=60)
CGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAAT < SRR4302544.537937/94‑1 (MQ=60)
GGGCCAGCGTCGTGCTGTCGCCGCC‑TTCTTTTTTGCTAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATT < SRR4302544.4257743/94‑1 (MQ=60)
GGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATT < SRR4302544.3814612/94‑1 (MQ=60)
GGGCCAGCGTCGTGAGGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATT < SRR4302544.3325434/94‑1 (MQ=60)
GCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTG < SRR4302544.2826475/94‑1 (MQ=60)
GCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTA > SRR4302544.1019465/1‑94 (MQ=60)
CCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGA < SRR4302544.4270496/94‑1 (MQ=60)
CAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAA > SRR4302544.3173217/1‑94 (MQ=60)
CAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAA > SRR4302544.4608778/1‑94 (MQ=60)
AGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAG > SRR4302544.641501/1‑94 (MQ=60)
GCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGA > SRR4302544.1280034/1‑94 (MQ=60)
CGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGAT > SRR4302544.2261491/1‑94 (MQ=60)
GTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGAAATTTGAAGATA < SRR4302544.2917751/94‑1 (MQ=60)
TCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAA < SRR4302544.325492/94‑1 (MQ=60)
TCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAA < SRR4302544.2220337/94‑1 (MQ=60)
GTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGG < SRR4302544.934978/94‑1 (MQ=60)
GTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGG > SRR4302544.1804432/1‑94 (MQ=60)
GTGATGACGACGCC‑TTCTTTTNTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGG < SRR4302544.3895704/94‑1 (MQ=60)
TGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAtggg > SRR4302544.1994332/1‑90 (MQ=60)
GATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCG < SRR4302544.1199218/94‑1 (MQ=60)
CGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACA < SRR4302544.1944546/94‑1 (MQ=60)
CGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACA > SRR4302544.2025050/1‑94 (MQ=60)
GACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAG > SRR4302544.2433858/1‑94 (MQ=60)
ACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGC > SRR4302544.2152094/1‑94 (MQ=60)
CGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCG > SRR4302544.4717212/1‑94 (MQ=60)
GCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGA > SRR4302544.2825779/1‑94 (MQ=60)
CCTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAG > SRR4302544.2240127/1‑94 (MQ=60)
CTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGA > SRR4302544.3926223/1‑94 (MQ=60)
CTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGA > SRR4302544.1069227/1‑94 (MQ=60)
CTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGA > SRR4302544.969505/1‑94 (MQ=60)
TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGAT > SRR4302544.2479385/1‑94 (MQ=60)
TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGAT < SRR4302544.3241936/94‑1 (MQ=60)
|
GGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCCTTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGAT > NC_000913/3509865‑3510050
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
