Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 1475 266.7 13469680 98.2% 13227225 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,509,958 Δ1 bp intergenic (‑195/+314) yhfZ ← / ← trpS hypothetical protein/tryptophan tRNA synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,509,9560T.100.0% 1486.3 / NA 319intergenic (‑193/+316)yhfZ/trpShypothetical protein/tryptophan tRNA synthetase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base . (102/217);  total (102/217)

Only 100 of 337 total aligned reads displayed.

CGGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCCTTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAG  >  NC_000913/3509864‑3510044
                                                                                            |                                                                                        
 ggCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCAACCAACAAATAACGGGCCAGCGTCGTGATGACGACGCctt                                                                                         <  2:2543917/93‑1 (MQ=255)
      tcattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCtttt                                                                                   <  1:4361544/93‑1 (MQ=255)
      tcattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCtttt                                                                                   >  2:6013471/1‑93 (MQ=255)
      tcattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCtttt                                                                                   <  2:641597/93‑1 (MQ=255)
      tcattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCtttt                                                                                   >  1:3085726/1‑93 (MQ=255)
       cattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCttttt                                                                                  >  1:6401172/1‑93 (MQ=255)
       cattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCttttt                                                                                  <  1:2983465/93‑1 (MQ=255)
        attTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCtttttt                                                                                 >  1:604059/1‑93 (MQ=255)
          ttGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGa                                                                               <  2:1864573/93‑1 (MQ=255)
            gCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATa                                                                             <  1:185458/93‑1 (MQ=255)
               aGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAc                                                                          <  2:292170/93‑1 (MQ=255)
                gCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACg                                                                         <  2:3114546/93‑1 (MQ=255)
                gCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACg                                                                         <  2:1444796/93‑1 (MQ=255)
                 cTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGt                                                                        <  1:940383/93‑1 (MQ=255)
                 cTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGt                                                                        <  2:766649/93‑1 (MQ=255)
                  tCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGtt                                                                       >  1:5031550/1‑93 (MQ=255)
                  tCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGtt                                                                       >  2:3893346/1‑93 (MQ=255)
                   cATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTc                                                                      <  1:5375897/93‑1 (MQ=255)
                    aTCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCg                                                                     <  1:3222819/93‑1 (MQ=255)
                    aTCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCg                                                                     >  2:6608693/1‑93 (MQ=255)
                     tCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGATGCC‑TTCTTTTTTGATAAACGTTCGa                                                                    >  2:4152120/1‑93 (MQ=255)
                     tCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGa                                                                    >  2:4521741/1‑93 (MQ=255)
                     tCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGa                                                                    >  2:5065631/1‑93 (MQ=255)
                      cTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGAc                                                                   >  1:5212201/1‑93 (MQ=255)
                          ggTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCat                                                               <  1:1012695/93‑1 (MQ=255)
                          ggTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCat                                                               <  2:3160843/93‑1 (MQ=255)
                           gTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGtata                                                              <  2:5098492/93‑1 (MQ=255)
                            ttttCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCataa                                                             <  2:3536043/93‑1 (MQ=255)
                            ttttCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCataa                                                             <  1:2088303/93‑1 (MQ=255)
                             tttCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCataat                                                            <  2:2992305/93‑1 (MQ=255)
                               tCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCCCCGCAtaataa                                                          >  1:469681/1‑93 (MQ=255)
                                cAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATaaa                                                         <  2:6324476/93‑1 (MQ=255)
                                cAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATaaa                                                         <  1:801095/93‑1 (MQ=255)
                                  aTCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAAtt                                                       >  2:3769402/1‑93 (MQ=255)
                                   tCGATTACCGCACTTTTCACCCAACAAAGAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAAttt                                                      <  2:1166603/93‑1 (MQ=255)
                                    cGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAAtttt                                                     <  1:5417595/93‑1 (MQ=255)
                                    cGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAAtttt                                                     <  2:2811364/93‑1 (MQ=255)
                                      aTTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCa                                                   <  1:4003189/93‑1 (MQ=255)
                                       ttACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAg                                                  <  1:3694485/93‑1 (MQ=255)
                                       ttACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAg                                                  <  2:5158852/93‑1 (MQ=255)
                                       ttACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAg                                                  <  1:229505/93‑1 (MQ=255)
                                       ttACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAg                                                  <  2:4640271/93‑1 (MQ=255)
                                         tccGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTa                                                <  1:565514/92‑1 (MQ=255)
                                         aCCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTa                                                >  2:4255470/1‑93 (MQ=255)
                                           cGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTaaa                                              >  2:343156/1‑93 (MQ=255)
                                           cGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTaaa                                              <  1:1283654/93‑1 (MQ=255)
                                             cACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTTAATAAAtt                                            >  1:5717368/1‑93 (MQ=255)
                                             cACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAtt                                            <  2:6140420/93‑1 (MQ=255)
                                             cACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAtt                                            <  2:4567546/93‑1 (MQ=255)
                                              aCTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTg                                           <  2:2708873/93‑1 (MQ=255)
                                              aCTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTg                                           >  1:1753638/1‑93 (MQ=255)
                                                  ttCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAata                                       <  1:3270972/93‑1 (MQ=255)
                                                    cACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATAtt                                     <  1:1490297/93‑1 (MQ=255)
                                                    cACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATAtt                                     <  1:5437827/93‑1 (MQ=255)
                                                    cACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATAtt                                     <  1:5902559/93‑1 (MQ=255)
                                                    cACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATAtt                                     <  2:2635711/93‑1 (MQ=255)
                                                     ccccAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATAttt                                    <  2:1776284/92‑1 (MQ=255)
                                                      cccAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTta                                   <  1:6690283/93‑1 (MQ=255)
                                                      cccAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTta                                   <  2:236758/93‑1 (MQ=255)
                                                       ccAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTtat                                  <  1:5157023/93‑1 (MQ=255)
                                                       ccAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTtat                                  >  2:2185746/1‑93 (MQ=255)
                                                       ccAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTAGACGCATAATAAATTTTCAGTAAATTGAATATTtat                                  >  1:3866449/1‑93 (MQ=255)
                                                        caacaaATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTtata                                 <  1:4881968/93‑1 (MQ=255)
                                                        caacaaATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTtata                                 >  2:5489684/1‑93 (MQ=255)
                                                        caacaaATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAGTGAATATTtata                                 <  1:2161424/93‑1 (MQ=255)
                                                         aacaaATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTatat                                <  1:3939699/93‑1 (MQ=255)
                                                          acaaATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATc                               >  2:6213953/1‑93 (MQ=255)
                                                          acaaATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATc                               >  1:3285832/1‑93 (MQ=255)
                                                          acaaATAACGGGCCAGCGTCGTGATGACCACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATc                               >  2:4065998/1‑93 (MQ=255)
                                                           caaATAAGGGGCTGGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCt                              <  2:4210259/93‑1 (MQ=255)
                                                           caaATAACGGGCAAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCt                              >  1:112792/1‑93 (MQ=255)
                                                             aaTAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTc                            <  2:898411/93‑1 (MQ=255)
                                                              aTAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCa                           <  1:3630381/93‑1 (MQ=255)
                                                              aTAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCa                           <  1:1956733/93‑1 (MQ=255)
                                                               tAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAg                          >  2:4854184/1‑93 (MQ=255)
                                                                 aCGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGa                        <  2:2234057/93‑1 (MQ=255)
                                                                 aCGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGa                        >  2:1923121/1‑93 (MQ=255)
                                                                 aCGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGa                        <  2:6541475/93‑1 (MQ=255)
                                                                  cGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGaa                       <  2:2477677/93‑1 (MQ=255)
                                                                    ggCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAAtt                     <  1:4133326/93‑1 (MQ=255)
                                                                    ggCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAAtt                     <  1:154133/93‑1 (MQ=255)
                                                                     gCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAAttt                    <  1:6271782/93‑1 (MQ=255)
                                                                     gCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAAttt                    <  2:582217/93‑1 (MQ=255)
                                                                        aGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGaa                 <  1:5743973/93‑1 (MQ=255)
                                                                           gtcgtGATTACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGAt              >  1:6507305/1‑93 (MQ=255)
                                                                           gtcgtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGAt              <  2:4700762/93‑1 (MQ=255)
                                                                           gtcgtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGAt              <  2:5645165/93‑1 (MQ=255)
                                                                            tcgtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATa             <  1:453800/93‑1 (MQ=255)
                                                                             cgtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATaa            <  1:4273445/93‑1 (MQ=255)
                                                                             cgtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATaa            <  1:2448517/93‑1 (MQ=255)
                                                                              gtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAg           <  2:3614591/93‑1 (MQ=255)
                                                                              gtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAg           <  1:1868673/93‑1 (MQ=255)
                                                                              gtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAg           >  2:3999512/1‑93 (MQ=255)
                                                                               tgatgaCGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATCATAAATTTTCAGTAAATTGATTATTTATATCTTCAGGAATTTGAAGATACgg          >  1:6111448/1‑93 (MQ=255)
                                                                                gatgaCGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGgc         >  1:2598732/1‑93 (MQ=255)
                                                                                     cgacgCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAAc    <  2:5426117/93‑1 (MQ=255)
                                                                                      gacgCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACa   >  2:427757/1‑93 (MQ=255)
                                                                                      gacgCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACa   >  2:330293/1‑93 (MQ=255)
                                                                                       acgCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAg  <  1:5318783/93‑1 (MQ=255)
                                                                                       acgCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAg  <  1:3411222/93‑1 (MQ=255)
                                                                                            |                                                                                        
CGGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCCTTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAG  >  NC_000913/3509864‑3510044

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCCTTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGAT  >  NC_000913/3509865‑3510050
                                                                                             |                                                                                            
GGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCCTTC                                                                                              >  SRR4302536.6184066/1‑94 (MQ=60)
  CATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTT                                                                                           >  SRR4302536.1578687/1‑94 (MQ=60)
   ATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTT                                                                                          <  SRR4302536.5728521/94‑1 (MQ=60)
   ATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTT                                                                                          <  SRR4302536.3137636/94‑1 (MQ=60)
    TTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTT                                                                                         >  SRR4302536.3175983/1‑94 (MQ=60)
    TTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTT                                                                                         <  SRR4302536.1120852/94‑1 (MQ=60)
     TCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTT                                                                                        <  SRR4302536.5347929/94‑1 (MQ=60)
     TCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTT                                                                                        >  SRR4302536.2352288/1‑94 (MQ=60)
     TCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTT                                                                                        <  SRR4302536.4491920/94‑1 (MQ=60)
     TCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTT                                                                                        >  SRR4302536.6592229/1‑94 (MQ=60)
     TCATTTGCCAGCTCATCTATGATTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTT                                                                                        <  SRR4302536.5894567/94‑1 (MQ=60)
      CATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTT                                                                                       <  SRR4302536.1855123/94‑1 (MQ=60)
      CATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTT                                                                                       >  SRR4302536.621920/1‑94 (MQ=60)
      CATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTT                                                                                       <  SRR4302536.3071281/94‑1 (MQ=60)
       ATTTGCCAGCTCATCTATGGTTTTTAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTG                                                                                      <  SRR4302536.4571849/94‑1 (MQ=60)
       ATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTG                                                                                      <  SRR4302536.1434727/94‑1 (MQ=60)
       ATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTG                                                                                      <  SRR4302536.5079701/94‑1 (MQ=60)
          TGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATA                                                                                   <  SRR4302536.6228590/94‑1 (MQ=60)
          TGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATA                                                                                   >  SRR4302536.4316072/1‑94 (MQ=60)
           GCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAA                                                                                  <  SRR4302536.190349/94‑1 (MQ=60)
            CCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAA                                                                                 <  SRR4302536.5525531/94‑1 (MQ=60)
            CCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAA                                                                                 <  SRR4302536.4814900/94‑1 (MQ=60)
             CAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAC                                                                                <  SRR4302536.1984918/94‑1 (MQ=60)
             CAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAC                                                                                >  SRR4302536.1887938/1‑94 (MQ=60)
             CAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAC                                                                                <  SRR4302536.1607313/94‑1 (MQ=60)
             CAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAC                                                                                <  SRR4302536.791122/94‑1 (MQ=60)
             CAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAC                                                                                <  SRR4302536.2687322/94‑1 (MQ=60)
              AGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACG                                                                               >  SRR4302536.2777080/1‑94 (MQ=60)
              AGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACG                                                                               <  SRR4302536.4010395/94‑1 (MQ=60)
              AGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACG                                                                               <  SRR4302536.6689911/94‑1 (MQ=60)
               GCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGT                                                                              >  SRR4302536.1172728/1‑94 (MQ=60)
                CTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTT                                                                             <  SRR4302536.968127/94‑1 (MQ=60)
                CTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTT                                                                             >  SRR4302536.5182385/1‑94 (MQ=60)
                CTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTT                                                                             <  SRR4302536.2487380/94‑1 (MQ=60)
                CTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTT                                                                             <  SRR4302536.5199431/94‑1 (MQ=60)
                  CATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCG                                                                           <  SRR4302536.6053078/94‑1 (MQ=60)
                  CATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCG                                                                           <  SRR4302536.1854132/94‑1 (MQ=60)
                  CATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCG                                                                           <  SRR4302536.5536278/94‑1 (MQ=60)
                  CATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCG                                                                           >  SRR4302536.89090/1‑94 (MQ=60)
                  CATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCG                                                                           <  SRR4302536.5454027/94‑1 (MQ=60)
                   ATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGA                                                                          <  SRR4302536.3317308/94‑1 (MQ=60)
                    TCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGAC                                                                         <  SRR4302536.4513535/94‑1 (MQ=60)
                    TCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGAC                                                                         >  SRR4302536.5367535/1‑94 (MQ=60)
                     CTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACG                                                                        >  SRR4302536.5444937/1‑94 (MQ=60)
                     CTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACG                                                                        >  SRR4302536.6604381/1‑94 (MQ=60)
                       ATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCA                                                                      <  SRR4302536.5969779/94‑1 (MQ=60)
                       ATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCA                                                                      <  SRR4302536.5538129/94‑1 (MQ=60)
                         GGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATA                                                                    <  SRR4302536.3499331/94‑1 (MQ=60)
                         GGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATA                                                                    <  SRR4302536.1042592/94‑1 (MQ=60)
                         GGTTTTCAATAGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATA                                                                    >  SRR4302536.5781730/1‑94 (MQ=60)
                          GTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAA                                                                   <  SRR4302536.4961620/94‑1 (MQ=60)
                          GTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAA                                                                   <  SRR4302536.2124250/94‑1 (MQ=60)
                          GTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAA                                                                   >  SRR4302536.6501198/1‑94 (MQ=60)
                           TTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAAT                                                                  <  SRR4302536.2151156/94‑1 (MQ=60)
                           TTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAAT                                                                  <  SRR4302536.5598526/94‑1 (MQ=60)
                            TTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATA                                                                 >  SRR4302536.2267055/1‑94 (MQ=60)
                            TTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATA                                                                 <  SRR4302536.1442498/94‑1 (MQ=60)
                             TTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCCCCGCATAATAA                                                                >  SRR4302536.481951/1‑94 (MQ=60)
                               CAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAAT                                                              <  SRR4302536.824584/94‑1 (MQ=60)
                                AATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATT                                                             >  SRR4302536.6635250/1‑94 (MQ=60)
                                 ATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTT                                                            <  SRR4302536.3930694/94‑1 (MQ=60)
                                  TCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTT                                                           >  SRR4302536.1089961/1‑94 (MQ=60)
                                   CGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTC                                                          <  SRR4302536.5579527/94‑1 (MQ=60)
                                    GATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCA                                                         >  SRR4302536.866473/1‑94 (MQ=60)
                                     ATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAG                                                        <  SRR4302536.1544262/94‑1 (MQ=60)
                                     ATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAG                                                        <  SRR4302536.4121972/94‑1 (MQ=60)
                                      TTACCGCACTTTTCGCCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGT                                                       <  SRR4302536.2350149/94‑1 (MQ=60)
                                      TTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGT                                                       <  SRR4302536.235625/94‑1 (MQ=60)
                                      TTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGT                                                       <  SRR4302536.3804971/94‑1 (MQ=60)
                                       TACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTA                                                      <  SRR4302536.2565949/94‑1 (MQ=60)
                                       TACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTA                                                      <  SRR4302536.4086548/94‑1 (MQ=60)
                                       TACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTA                                                      <  SRR4302536.4493681/94‑1 (MQ=60)
                                        TCCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAA                                                     <  SRR4302536.579912/94‑1 (MQ=60)
                                         CCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAA                                                    <  SRR4302536.3857958/94‑1 (MQ=60)
                                          CGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGATGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAT                                                   <  SRR4302536.1912041/94‑1 (MQ=60)
                                          CGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAT                                                   >  SRR4302536.4210652/1‑94 (MQ=60)
                                          CGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAT                                                   >  SRR4302536.3215441/1‑94 (MQ=60)
                                          CGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAT                                                   >  SRR4302536.6395154/1‑94 (MQ=60)
                                          CGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAT                                                   <  SRR4302536.2589332/94‑1 (MQ=60)
                                          CGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAT                                                   >  SRR4302536.4210653/1‑94 (MQ=60)
                                          CGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAT                                                   <  SRR4302536.1322072/94‑1 (MQ=60)
                                          CGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAT                                                   <  SRR4302536.3735299/94‑1 (MQ=60)
                                           GCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTTAATAAATT                                                  >  SRR4302536.5887387/1‑94 (MQ=60)
                                            CACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTG                                                 <  SRR4302536.2198341/94‑1 (MQ=60)
                                            CACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTG                                                 >  SRR4302536.1805558/1‑94 (MQ=60)
                                            CACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTG                                                 <  SRR4302536.312364/94‑1 (MQ=60)
                                            CACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTG                                                 >  SRR4302536.2052498/1‑94 (MQ=60)
                                            CACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTCTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTG                                                 <  SRR4302536.3537741/94‑1 (MQ=60)
                                            CACTTTGCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTG                                                 <  SRR4302536.3372156/94‑1 (MQ=60)
                                                TTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATA                                             <  SRR4302536.4709001/94‑1 (MQ=60)
                                                 TTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATAT                                            <  SRR4302536.1410370/94‑1 (MQ=60)
                                                 TTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATAT                                            <  SRR4302536.3367027/94‑1 (MQ=60)
                                                  TCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATT                                           <  SRR4302536.1923353/94‑1 (MQ=60)
                                                  TCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATT                                           <  SRR4302536.5227619/94‑1 (MQ=60)
                                                   CACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTT                                          <  SRR4302536.5600449/94‑1 (MQ=60)
                                                   CACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTT                                          >  SRR4302536.3277885/1‑94 (MQ=60)
                                                   CACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTT                                          <  SRR4302536.1534333/94‑1 (MQ=60)
                                                   CACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTT                                          <  SRR4302536.6078337/94‑1 (MQ=60)
                                                   CACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTT                                          <  SRR4302536.1237261/94‑1 (MQ=60)
                                                    ACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTA                                         <  SRR4302536.3458368/94‑1 (MQ=60)
                                                     CCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTAT                                        <  SRR4302536.6888989/94‑1 (MQ=60)
                                                     CCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTAGACGCATAATAAATTTTCAGTAAATTGAATATTTAT                                        >  SRR4302536.3981499/1‑94 (MQ=60)
                                                      CCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATA                                       <  SRR4302536.2737601/94‑1 (MQ=60)
                                                      CCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATA                                       <  SRR4302536.3352710/94‑1 (MQ=60)
                                                      CCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATA                                       <  SRR4302536.5310900/94‑1 (MQ=60)
                                                      CCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATA                                       <  SRR4302536.3929519/94‑1 (MQ=60)
                                                       CAACAAATAACGGGCCAGGGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATAGTTATAG                                      <  SRR4302536.5364081/94‑1 (MQ=60)
                                                       CAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATAT                                      <  SRR4302536.5028845/94‑1 (MQ=60)
                                                       CAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAGTGAATATTTATAT                                      <  SRR4302536.2226438/94‑1 (MQ=60)
                                                        AACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATC                                     >  SRR4302536.3382483/1‑94 (MQ=60)
                                                        AACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATC                                     <  SRR4302536.1261218/94‑1 (MQ=60)
                                                        AACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATC                                     <  SRR4302536.4056741/94‑1 (MQ=60)
                                                         ACAAATAACGGGCCAGCGTCGTGATGACGATGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCT                                    <  SRR4302536.5478253/94‑1 (MQ=60)
                                                         ACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCT                                    <  SRR4302536.6744380/94‑1 (MQ=60)
                                                         ACAAATAACGGGCAAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCT                                    >  SRR4302536.115777/1‑94 (MQ=60)
                                                          CAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTTATAAAAGTTCGACGCATAATAAATTTTTAGTAAATTTAATATTTATATCTT                                   >  SRR4302536.5783355/1‑94 (MQ=60)
                                                          CAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTT                                   >  SRR4302536.4274846/1‑94 (MQ=60)
                                                          CAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTT                                   <  SRR4302536.5572758/94‑1 (MQ=60)
                                                          CAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGAAAATTGAATACTTATATCTT                                   <  SRR4302536.6762097/94‑1 (MQ=60)
                                                           AAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTTAATATTTATATCTTC                                  >  SRR4302536.5025287/1‑94 (MQ=60)
                                                             ATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAG                                <  SRR4302536.2106145/94‑1 (MQ=60)
                                                             ATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAG                                <  SRR4302536.2015573/94‑1 (MQ=60)
                                                             ATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAG                                <  SRR4302536.2175943/94‑1 (MQ=60)
                                                             ATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAG                                <  SRR4302536.3772114/94‑1 (MQ=60)
                                                             ATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAG                                <  SRR4302536.3738966/94‑1 (MQ=60)
                                                             ATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAG                                >  SRR4302536.5331044/1‑94 (MQ=60)
                                                              TAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGG                               <  SRR4302536.3993055/94‑1 (MQ=60)
                                                              TAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGG                               <  SRR4302536.5586207/94‑1 (MQ=60)
                                                              TAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGG                               <  SRR4302536.737744/94‑1 (MQ=60)
                                                              TAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGG                               <  SRR4302536.6285220/94‑1 (MQ=60)
                                                              TAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGG                               <  SRR4302536.3320174/94‑1 (MQ=60)
                                                              AAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGG                               <  SRR4302536.3344681/94‑1 (MQ=60)
                                                                 CGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAAT                            <  SRR4302536.6433666/94‑1 (MQ=60)
                                                                  GGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATT                           <  SRR4302536.4480024/94‑1 (MQ=60)
                                                                  GGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATT                           <  SRR4302536.5938441/94‑1 (MQ=60)
                                                                   GGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTT                          <  SRR4302536.4255864/94‑1 (MQ=60)
                                                                   GGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTT                          <  SRR4302536.375405/94‑1 (MQ=60)
                                                                   GGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTT                          <  SRR4302536.158115/94‑1 (MQ=60)
                                                                    GCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTG                         <  SRR4302536.6458641/94‑1 (MQ=60)
                                                                     CCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGA                        >  SRR4302536.6334043/1‑94 (MQ=60)
                                                                       AGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAG                      <  SRR4302536.5914836/94‑1 (MQ=60)
                                                                        GCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGA                     <  SRR4302536.4862319/94‑1 (MQ=60)
                                                                         CGTCGTGATTACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGAT                    >  SRR4302536.6701236/1‑94 (MQ=60)
                                                                         CGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGAT                    <  SRR4302536.5908616/94‑1 (MQ=60)
                                                                          GTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATA                   >  SRR4302536.5868605/1‑94 (MQ=60)
                                                                           TCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAA                  <  SRR4302536.465706/94‑1 (MQ=60)
                                                                           TCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAA                  <  SRR4302536.4436009/94‑1 (MQ=60)
                                                                           GCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAA                  <  SRR4302536.5558355/94‑1 (MQ=60)
                                                                            CGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAG                 <  SRR4302536.4400833/94‑1 (MQ=60)
                                                                            CGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAG                 >  SRR4302536.899127/1‑94 (MQ=60)
                                                                            CGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAG                 <  SRR4302536.2522487/94‑1 (MQ=60)
                                                                             GTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATCATAAATTTTCAGTAAATTGATTATTTATATCTTCAGGAATTTGAAGATACGG                >  SRR4302536.6293619/1‑94 (MQ=60)
                                                                             GTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGG                <  SRR4302536.1924919/94‑1 (MQ=60)
                                                                              TGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGC               >  SRR4302536.2676775/1‑94 (MQ=60)
                                                                               GATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCG              <  SRR4302536.5149275/94‑1 (MQ=60)
                                                                               GATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCG              >  SRR4302536.6146404/1‑94 (MQ=60)
                                                                                 TGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCA            >  SRR4302536.4236909/1‑94 (MQ=60)
                                                                                   ACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAAC          >  SRR4302536.1680277/1‑94 (MQ=60)
                                                                                    CGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACA         >  SRR4302536.4113720/1‑94 (MQ=60)
                                                                                      ACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGC       <  SRR4302536.6532768/94‑1 (MQ=60)
                                                                                      ACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGC       <  SRR4302536.1968833/94‑1 (MQ=60)
                                                                                      ACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGC       <  SRR4302536.3512701/94‑1 (MQ=60)
                                                                                      ACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGC       >  SRR4302536.4886694/1‑94 (MQ=60)
                                                                                      ACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGC       <  SRR4302536.5477666/94‑1 (MQ=60)
                                                                                       CGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCG      <  SRR4302536.4171549/94‑1 (MQ=60)
                                                                                       CGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCG      <  SRR4302536.2606431/94‑1 (MQ=60)
                                                                                       CGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCG      <  SRR4302536.1349060/94‑1 (MQ=60)
                                                                                          CCTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAG    >  SRR4302536.3459782/1‑94 (MQ=60)
                                                                                           CTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGA   >  SRR4302536.2499875/1‑94 (MQ=60)
                                                                                           CTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGA   >  SRR4302536.4719749/1‑94 (MQ=60)
                                                                                            TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGATAT  <  SRR4302536.6817975/94‑1 (MQ=60)
                                                                                            TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGAT  <  SRR4302536.1162128/94‑1 (MQ=60)
                                                                                            TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGAT  <  SRR4302536.6084344/94‑1 (MQ=60)
                                                                                             |                                                                                            
GGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCCTTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGAT  >  NC_000913/3509865‑3510050

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑